| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134298759
Identifier: 134298759
GI number: 134298759
Start: 953893
End: 954717
Strand: Reverse
Name: 134298759
Synonym: Dred_0894
Alternate gene names: NA
Gene position: 954717-953893 (Counterclockwise)
Preceding gene: 134298772
Following gene: 134298756
Centisome position: 26.46
GC content: 34.79
Gene sequence:
>825_bases ATGAGTTTTATTGATGTTGATGTAAATAAAATAGTCGAATACCCTACAACCTTTGGCTCTCCAGGTTGCCATTTGCTCGA TCAATTAGGTATTTGTTTTTATACCAATACTGTTGAGAAAATTATGTATACGATACAGTCAAGCGCAACCGATCCCGAAA AGTTGTCTATATGTAAATCCGGTTATTGTGGTAAGCTTTTAGATGCATTCAAACCAGGACATACACCAGGTAATCACCAT GACCCTATTACGTTATCTGAATACAATGGCAAGTACTGGGTTGGTGAGGGAAAGCACCGTGTGTGTATAGCAAAGAGATT TGGTATTAAAACTATACAAGCTAATATTACAAAACTAGATCGGGATATTTATTCCTTACTTCCCACTGTTGGTTCCCCAG GGCTTTTTTCAGCAACAAAAATAAAAACCAAAAGGCATTTTTATACGGGACAATACCTATTTTTATGGGCGGGAAAACCC GATCATACAATGGGTGGGTCCATAATGGAAAAACTAAACTTCAAATATCGAAAAGGATCTTTAGATGTATGTCACAATAT TTTTGATGGATTAGATTACTCCCAAATCGTAGCAAGTTCGGATAATAATTTTGTAAAAAGACTTATTTGCGGAAATCCCC AATTATTTAGCACTTATGTTAGTATAAGTAATGATCACCCTCTTACCAAAATCTGGCTTGTTCGTCTTTCCTTTGATGAT ATTCCTAACAATAAAAATAAAGTTGAAACTTTATATCGTGTTGGACTGTGGCGTAAACATCATGAAAAAGAACTTATTAA TTCTTTGGATCTAGATTTTTACTAG
Upstream 100 bases:
>100_bases AACTGCTATAATAGCATAAACATCTGTATCCATGATATTACCTTGTATACTCTGCTTCACTGGACTATAACCCCCTTATT ACTTTAATGGAGGAATTATT
Downstream 100 bases:
>100_bases TTATTTAGGAATTCCCCAATAAGTAATCAATTTTTTCCCTTAATCTCATTAACTCTTTGGCACAATCTTCTCTTTCATTA TGAGACATGGCACGCCAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSFIDVDVNKIVEYPTTFGSPGCHLLDQLGICFYTNTVEKIMYTIQSSATDPEKLSICKSGYCGKLLDAFKPGHTPGNHH DPITLSEYNGKYWVGEGKHRVCIAKRFGIKTIQANITKLDRDIYSLLPTVGSPGLFSATKIKTKRHFYTGQYLFLWAGKP DHTMGGSIMEKLNFKYRKGSLDVCHNIFDGLDYSQIVASSDNNFVKRLICGNPQLFSTYVSISNDHPLTKIWLVRLSFDD IPNNKNKVETLYRVGLWRKHHEKELINSLDLDFY
Sequences:
>Translated_274_residues MSFIDVDVNKIVEYPTTFGSPGCHLLDQLGICFYTNTVEKIMYTIQSSATDPEKLSICKSGYCGKLLDAFKPGHTPGNHH DPITLSEYNGKYWVGEGKHRVCIAKRFGIKTIQANITKLDRDIYSLLPTVGSPGLFSATKIKTKRHFYTGQYLFLWAGKP DHTMGGSIMEKLNFKYRKGSLDVCHNIFDGLDYSQIVASSDNNFVKRLICGNPQLFSTYVSISNDHPLTKIWLVRLSFDD IPNNKNKVETLYRVGLWRKHHEKELINSLDLDFY >Mature_273_residues SFIDVDVNKIVEYPTTFGSPGCHLLDQLGICFYTNTVEKIMYTIQSSATDPEKLSICKSGYCGKLLDAFKPGHTPGNHHD PITLSEYNGKYWVGEGKHRVCIAKRFGIKTIQANITKLDRDIYSLLPTVGSPGLFSATKIKTKRHFYTGQYLFLWAGKPD HTMGGSIMEKLNFKYRKGSLDVCHNIFDGLDYSQIVASSDNNFVKRLICGNPQLFSTYVSISNDHPLTKIWLVRLSFDDI PNNKNKVETLYRVGLWRKHHEKELINSLDLDFY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31188; Mature: 31057
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFIDVDVNKIVEYPTTFGSPGCHLLDQLGICFYTNTVEKIMYTIQSSATDPEKLSICKS CCEEECCHHHHHCCCCCCCCCCHHHHHHCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHCC GYCGKLLDAFKPGHTPGNHHDPITLSEYNGKYWVGEGKHRVCIAKRFGIKTIQANITKLD CCCHHHHHHCCCCCCCCCCCCCEEEECCCCEEEECCCCCEEEEEECCCCEEEHHHHHHHH RDIYSLLPTVGSPGLFSATKIKTKRHFYTGQYLFLWAGKPDHTMGGSIMEKLNFKYRKGS HHHHHHHCCCCCCCCCCHHEEEHHHEEECCCEEEEEECCCCCCCCHHHHHHHCCEECCCC LDVCHNIFDGLDYSQIVASSDNNFVKRLICGNPQLFSTYVSISNDHPLTKIWLVRLSFDD HHHHHHHHCCCCHHHHHCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEEEECCC IPNNKNKVETLYRVGLWRKHHEKELINSLDLDFY CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SFIDVDVNKIVEYPTTFGSPGCHLLDQLGICFYTNTVEKIMYTIQSSATDPEKLSICKS CEEECCHHHHHCCCCCCCCCCHHHHHHCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHCC GYCGKLLDAFKPGHTPGNHHDPITLSEYNGKYWVGEGKHRVCIAKRFGIKTIQANITKLD CCCHHHHHHCCCCCCCCCCCCCEEEECCCCEEEECCCCCEEEEEECCCCEEEHHHHHHHH RDIYSLLPTVGSPGLFSATKIKTKRHFYTGQYLFLWAGKPDHTMGGSIMEKLNFKYRKGS HHHHHHHCCCCCCCCCCHHEEEHHHEEECCCEEEEEECCCCCCCCHHHHHHHCCEECCCC LDVCHNIFDGLDYSQIVASSDNNFVKRLICGNPQLFSTYVSISNDHPLTKIWLVRLSFDD HHHHHHHHCCCCHHHHHCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEEEECCC IPNNKNKVETLYRVGLWRKHHEKELINSLDLDFY CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA