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The map label for this gene is ycjC [C]

Identifier: 134298756

GI number: 134298756

Start: 951074

End: 951394

Strand: Reverse

Name: ycjC [C]

Synonym: Dred_0891

Alternate gene names: 134298756

Gene position: 951394-951074 (Counterclockwise)

Preceding gene: 134298759

Following gene: 134298754

Centisome position: 26.37

GC content: 35.51

Gene sequence:

>321_bases
ATGAGGTCTATGAATATTTCATTTAAAATTACAAAGTTAAGAAAATCTGTTGGCTGGAGTAAAAACAAACTAGCCAAAGA
ATCTGGATTGTCTCAAGCTTACATTAGTCAACTGGAGGCCGGACAAAAACAGCCAACCATTGATTCCTTGGATCGTATTT
GTTCGTCTTTGGGTCTAACTCTTGCAGAATTTTTTTCTGAAGAGAATAAACCTCTTTCTCCCGATATAGCTCAGTTGGTT
AATCATGCATCAAAATTAACTCCTATTCAGAGAGAATTAATTTCTTCGGTTATGAGGGAAATGGCAAAGGATAATGAGTA
A

Upstream 100 bases:

>100_bases
TATTATTAATTATAACTATGGTTTCAATATTTATCAATACTATAGTTATAATTCACTGGGATTTTTTTATGTTATGATAA
CTATAGTTATTAATACAAGG

Downstream 100 bases:

>100_bases
TATGCGGCTACTCATTTGGTGGCCATCAATACTGAATTTTTCTAGGAACTTGAAAGGTTGATTTATTATGTCATTTGCAG
AAATATTGTGGAGTTTTTCC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain Protein; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MRSMNISFKITKLRKSVGWSKNKLAKESGLSQAYISQLEAGQKQPTIDSLDRICSSLGLTLAEFFSEENKPLSPDIAQLV
NHASKLTPIQRELISSVMREMAKDNE

Sequences:

>Translated_106_residues
MRSMNISFKITKLRKSVGWSKNKLAKESGLSQAYISQLEAGQKQPTIDSLDRICSSLGLTLAEFFSEENKPLSPDIAQLV
NHASKLTPIQRELISSVMREMAKDNE
>Mature_106_residues
MRSMNISFKITKLRKSVGWSKNKLAKESGLSQAYISQLEAGQKQPTIDSLDRICSSLGLTLAEFFSEENKPLSPDIAQLV
NHASKLTPIQRELISSVMREMAKDNE

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11855; Mature: 11855

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSMNISFKITKLRKSVGWSKNKLAKESGLSQAYISQLEAGQKQPTIDSLDRICSSLGLT
CCCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LAEFFSEENKPLSPDIAQLVNHASKLTPIQRELISSVMREMAKDNE
HHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRSMNISFKITKLRKSVGWSKNKLAKESGLSQAYISQLEAGQKQPTIDSLDRICSSLGLT
CCCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LAEFFSEENKPLSPDIAQLVNHASKLTPIQRELISSVMREMAKDNE
HHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA