| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is minD [C]
Identifier: 134298525
GI number: 134298525
Start: 708253
End: 709113
Strand: Reverse
Name: minD [C]
Synonym: Dred_0657
Alternate gene names: 134298525
Gene position: 709113-708253 (Counterclockwise)
Preceding gene: 134298526
Following gene: 134298524
Centisome position: 19.65
GC content: 44.48
Gene sequence:
>861_bases ATGAAAGAGTTAACTGTCATTAGCGGTAAAGGTGGTACCGGTAAAACCAGCATCCTTGGCTCCTTTGCCACACTATCTAA CAAAGCTGTTATCTGTGACTGTGATGTGGATGCTGCCAATCTACATTTACTATTAAAACCAGATGTACAGGAAACGCACT CCTTTATAGGTGGCGTTAAGGCAAATATTAACTTAGAGTTATGCTCTAAATGCGGCAGTTGTGAGGAATTATGCAGGTTT TCTGCCATTAAAGAGCGGCAGGTTAATCCCTACGCCTGTGAAGGTTGCGGACTCTGCTATGGAATCTGTCCGTCTGGAGC AATCACACTCAATGATCATCAGTCTGGTCATTGGTATGTATCAGAAACCCAGTGGGGCCCAATGGTACATGCAAAGCTAG GCATTGCCGAGGGAAACTCAGGATTATTAGTTAGTGCAGTGCGTAAAAGGGCCAGAGAAATTGCCACCGAAAGGGATATA CCTCTCATTATCAGTGATGGTCCACCAGGCATTGGTTGTCCTGTGATATCTTCCTTGGCGGGCACTGATATGGCTTTGAT TGTTACAGAACCTACCCGTTCAGGGTTACATGATATGGAAAGAATTATCCAAGTAGCTGCTACCTTTGGCTGTCAAGCAG CTGTTTGTATTAATAAATATGATTTGGATACTGAGAATTGCTTCTCCATTGAAGCCGCTGCCAGCAAGCTAGATGTACCG GTAATAGGGAAAATCCCGTATAACCAAACCCTTTCTCAATCCTTATTGCAGGGGACTCCGGTCACTCTCCTAGGTCAAAA CGAGGGTGCATCTGCAATTACGAAACTTTGGCAACAAGTTACCGGACTATTAGGAGTTTAG
Upstream 100 bases:
>100_bases CCCGGGCCTATGCCAAGGGTATCCCCCTTGTTAAAAGTAGCCCTGTCTGGACAGAAAAGTTCATTGACCTATATCAACAG GTTACCCAGGAGGTGACCAA
Downstream 100 bases:
>100_bases CATGGTAAGGTTTCGTTGCAGTCAATGTGGAAAAACTGTTGAATATCTGCGCATCTATCATAAAGATGAAATTCCACGTA TATGCAGCTGCGGGGGTAAA
Product: cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MKELTVISGKGGTGKTSILGSFATLSNKAVICDCDVDAANLHLLLKPDVQETHSFIGGVKANINLELCSKCGSCEELCRF SAIKERQVNPYACEGCGLCYGICPSGAITLNDHQSGHWYVSETQWGPMVHAKLGIAEGNSGLLVSAVRKRAREIATERDI PLIISDGPPGIGCPVISSLAGTDMALIVTEPTRSGLHDMERIIQVAATFGCQAAVCINKYDLDTENCFSIEAAASKLDVP VIGKIPYNQTLSQSLLQGTPVTLLGQNEGASAITKLWQQVTGLLGV
Sequences:
>Translated_286_residues MKELTVISGKGGTGKTSILGSFATLSNKAVICDCDVDAANLHLLLKPDVQETHSFIGGVKANINLELCSKCGSCEELCRF SAIKERQVNPYACEGCGLCYGICPSGAITLNDHQSGHWYVSETQWGPMVHAKLGIAEGNSGLLVSAVRKRAREIATERDI PLIISDGPPGIGCPVISSLAGTDMALIVTEPTRSGLHDMERIIQVAATFGCQAAVCINKYDLDTENCFSIEAAASKLDVP VIGKIPYNQTLSQSLLQGTPVTLLGQNEGASAITKLWQQVTGLLGV >Mature_286_residues MKELTVISGKGGTGKTSILGSFATLSNKAVICDCDVDAANLHLLLKPDVQETHSFIGGVKANINLELCSKCGSCEELCRF SAIKERQVNPYACEGCGLCYGICPSGAITLNDHQSGHWYVSETQWGPMVHAKLGIAEGNSGLLVSAVRKRAREIATERDI PLIISDGPPGIGCPVISSLAGTDMALIVTEPTRSGLHDMERIIQVAATFGCQAAVCINKYDLDTENCFSIEAAASKLDVP VIGKIPYNQTLSQSLLQGTPVTLLGQNEGASAITKLWQQVTGLLGV
Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest
COG id: COG1149
COG function: function code C; MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 30233; Mature: 30233
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKELTVISGKGGTGKTSILGSFATLSNKAVICDCDVDAANLHLLLKPDVQETHSFIGGVK CCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCHHHHHHHHCCEE ANINLELCSKCGSCEELCRFSAIKERQVNPYACEGCGLCYGICPSGAITLNDHQSGHWYV EEEEHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCEEEECCCCCCCEEE SETQWGPMVHAKLGIAEGNSGLLVSAVRKRAREIATERDIPLIISDGPPGIGCPVISSLA ECCCCCCEEEEEEEEEECCCCEEHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHC GTDMALIVTEPTRSGLHDMERIIQVAATFGCQAAVCINKYDLDTENCFSIEAAASKLDVP CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEHHHHHHHCCCC VIGKIPYNQTLSQSLLQGTPVTLLGQNEGASAITKLWQQVTGLLGV EEECCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKELTVISGKGGTGKTSILGSFATLSNKAVICDCDVDAANLHLLLKPDVQETHSFIGGVK CCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCHHHHHHHHCCEE ANINLELCSKCGSCEELCRFSAIKERQVNPYACEGCGLCYGICPSGAITLNDHQSGHWYV EEEEHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCEEEECCCCCCCEEE SETQWGPMVHAKLGIAEGNSGLLVSAVRKRAREIATERDIPLIISDGPPGIGCPVISSLA ECCCCCCEEEEEEEEEECCCCEEHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHC GTDMALIVTEPTRSGLHDMERIIQVAATFGCQAAVCINKYDLDTENCFSIEAAASKLDVP CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEHHHHHHHCCCC VIGKIPYNQTLSQSLLQGTPVTLLGQNEGASAITKLWQQVTGLLGV EEECCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]