Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

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The map label for this gene is 134298526

Identifier: 134298526

GI number: 134298526

Start: 709110

End: 709958

Strand: Reverse

Name: 134298526

Synonym: Dred_0658

Alternate gene names: NA

Gene position: 709958-709110 (Counterclockwise)

Preceding gene: 134298527

Following gene: 134298525

Centisome position: 19.68

GC content: 47.11

Gene sequence:

>849_bases
ATGAAGATCTCTGTTGCCAGTGGTAAAGGCGGCACCGGTAAAACTTTGGTTGCCACCAGTTTGGCCCTATCGCTCATTAA
GAATAACCCATCGGTTCAACTTTTGGATTGCGATGTGGAAGAACCAAATGTGCACCTTTTTCTGGATCAAGAACCCATCA
ATGAAACTACGGTCAGCTTACCTATTCCCAAAATTAACGAAGACCTATGCCAGCATTGTGGGAAGTGTACAGAGATTTGT
CGTTTTAATGCCATTACCCTACTAAAGGACACCATACTGATATTTCCAGACGTCTGTCATAGCTGTAGTGCTTGTTGGCA
CTTCTGTCCGACGGGAGCCCTAGAACCGAGTCCCAGAGAGGTGGGGACCGTCCAAATAAGCCAGTCTGGCAAATTAAAAT
TAATTACTGGACGATTAAACCTAGGCGTGCATGCCAGCCCTCCGGTCATCAAGGCGGTTCGAGGTGCCATAGATACGGAC
ACTGTTACAATTATTGATGGACCACCTGGCAGTTCTTGCCCAGTGATGGCTGCAGTCGAGGAAACAGATTACTGTATATT
GGTAACAGAACCCACTCCCTTTGGGTTAAATGATCTATCTCTGGCCGTGGAAATGCTAAAGGTTCTTAATGTCCCCTGCG
GTGTCATTATCAACCGGGATGTACCGGGCAACCATTTAATCGATGATTACTGTCAGGAAAAGGGACTCCCTATACTCCTA
CGAATCCCCCTCGATACCGAGATAGCCCGGGCCTATGCCAAGGGTATCCCCCTTGTTAAAAGTAGCCCTGTCTGGACAGA
AAAGTTCATTGACCTATATCAACAGGTTACCCAGGAGGTGACCAAATGA

Upstream 100 bases:

>100_bases
AAGGGTACGGCACAGGATGTAATTAAAGACTATCAAAAAGACCTTCTGAGCAAAGCCAATGCACCCAACGTTGGCCCTCA
CGGTCGTTAGGGGTGATTGA

Downstream 100 bases:

>100_bases
AAGAGTTAACTGTCATTAGCGGTAAAGGTGGTACCGGTAAAACCAGCATCCTTGGCTCCTTTGCCACACTATCTAACAAA
GCTGTTATCTGTGACTGTGA

Product: cobyrinic acid a,c-diamide synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKISVASGKGGTGKTLVATSLALSLIKNNPSVQLLDCDVEEPNVHLFLDQEPINETTVSLPIPKINEDLCQHCGKCTEIC
RFNAITLLKDTILIFPDVCHSCSACWHFCPTGALEPSPREVGTVQISQSGKLKLITGRLNLGVHASPPVIKAVRGAIDTD
TVTIIDGPPGSSCPVMAAVEETDYCILVTEPTPFGLNDLSLAVEMLKVLNVPCGVIINRDVPGNHLIDDYCQEKGLPILL
RIPLDTEIARAYAKGIPLVKSSPVWTEKFIDLYQQVTQEVTK

Sequences:

>Translated_282_residues
MKISVASGKGGTGKTLVATSLALSLIKNNPSVQLLDCDVEEPNVHLFLDQEPINETTVSLPIPKINEDLCQHCGKCTEIC
RFNAITLLKDTILIFPDVCHSCSACWHFCPTGALEPSPREVGTVQISQSGKLKLITGRLNLGVHASPPVIKAVRGAIDTD
TVTIIDGPPGSSCPVMAAVEETDYCILVTEPTPFGLNDLSLAVEMLKVLNVPCGVIINRDVPGNHLIDDYCQEKGLPILL
RIPLDTEIARAYAKGIPLVKSSPVWTEKFIDLYQQVTQEVTK
>Mature_282_residues
MKISVASGKGGTGKTLVATSLALSLIKNNPSVQLLDCDVEEPNVHLFLDQEPINETTVSLPIPKINEDLCQHCGKCTEIC
RFNAITLLKDTILIFPDVCHSCSACWHFCPTGALEPSPREVGTVQISQSGKLKLITGRLNLGVHASPPVIKAVRGAIDTD
TVTIIDGPPGSSCPVMAAVEETDYCILVTEPTPFGLNDLSLAVEMLKVLNVPCGVIINRDVPGNHLIDDYCQEKGLPILL
RIPLDTEIARAYAKGIPLVKSSPVWTEKFIDLYQQVTQEVTK

Specific function: Unknown

COG id: COG1149

COG function: function code C; MinD superfamily P-loop ATPase containing an inserted ferredoxin domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 30479; Mature: 30479

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISVASGKGGTGKTLVATSLALSLIKNNPSVQLLDCDVEEPNVHLFLDQEPINETTVSL
CEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCCCCEEEE
PIPKINEDLCQHCGKCTEICRFNAITLLKDTILIFPDVCHSCSACWHFCPTGALEPSPRE
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHEECHHHHHHHHHHHHCCCCCCCCCCCCC
VGTVQISQSGKLKLITGRLNLGVHASPPVIKAVRGAIDTDTVTIIDGPPGSSCPVMAAVE
CEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEC
ETDYCILVTEPTPFGLNDLSLAVEMLKVLNVPCGVIINRDVPGNHLIDDYCQEKGLPILL
CCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCCEEE
RIPLDTEIARAYAKGIPLVKSSPVWTEKFIDLYQQVTQEVTK
ECCCCHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKISVASGKGGTGKTLVATSLALSLIKNNPSVQLLDCDVEEPNVHLFLDQEPINETTVSL
CEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCCCCEEEE
PIPKINEDLCQHCGKCTEICRFNAITLLKDTILIFPDVCHSCSACWHFCPTGALEPSPRE
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHEECHHHHHHHHHHHHCCCCCCCCCCCCC
VGTVQISQSGKLKLITGRLNLGVHASPPVIKAVRGAIDTDTVTIIDGPPGSSCPVMAAVE
CEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEC
ETDYCILVTEPTPFGLNDLSLAVEMLKVLNVPCGVIINRDVPGNHLIDDYCQEKGLPILL
CCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCCEEE
RIPLDTEIARAYAKGIPLVKSSPVWTEKFIDLYQQVTQEVTK
ECCCCHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]