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The map label for this gene is yadS [H]

Identifier: 134298491

GI number: 134298491

Start: 668494

End: 669114

Strand: Reverse

Name: yadS [H]

Synonym: Dred_0622

Alternate gene names: 134298491

Gene position: 669114-668494 (Counterclockwise)

Preceding gene: 134298492

Following gene: 134298490

Centisome position: 18.54

GC content: 40.9

Gene sequence:

>621_bases
ATGACTTTACTATCTTTATTAGATATGATAGGCACCTTTGCCTTTGCCTTAACCGGTGCATTGGTGGCCGTAAGAAAAGA
AATGGATTTATACGGAATTCTACTTCTATCTTTTGTTACTGCCATCGGCGGTGGAACCACTCGTGATCTGTTACTAGGTA
ATACGCCTGTATTCTTTTTAAACCAGCCCTCTTATTTTTACATATCCTTACTGGCTGGATTCTGTACATTTCTATTTCAC
AAGGAGTTGTTTAAAATCAATTCCATTATTTTGATTTTAGACGCCTTGGGACTGGGACTCTTCGTATGCGTTGGTGTTTC
CATAGCCCTCAGTGCCCACATCTCCTTCACAGGAGCTGTGATATTGGGCGTTGTTACAGGGACTGTGGGTGGTATTATTC
GGGATTTATTGGCCGGAGAAATCCCCACTGTACTTGTTAAAGACTTCTACGCTCTCATCTGTGTGGTGGGCGGAATTCTT
TACGTATATCTGCATCATTTAAATGTGCCCCATGATATAACGTTGCTTGTAAGTGCCAGTGTTATCTTTTTCTTACGATT
GGCAGCTATCAAATTAAAATGGAATTTTGTTAAGGCCTCCCGCTCTTCCCTTTTACAATAA

Upstream 100 bases:

>100_bases
CCGGGCTAAAATTAGGTAAAATATTTTAGTTGAATTTTCCCTGCTTATTGATAAAATGTATTAGGATATATTAATTATTC
TAAGCATCAGAGGGATGAAC

Downstream 100 bases:

>100_bases
AATAGTAAAAAATATAAAACCTGTTTCATAGAGCTTTTCTATAACAGGTTTTTATTTTTTTAAATATTTTATATGATAAA
TTTAATCCAGTTGGTTGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MTLLSLLDMIGTFAFALTGALVAVRKEMDLYGILLLSFVTAIGGGTTRDLLLGNTPVFFLNQPSYFYISLLAGFCTFLFH
KELFKINSIILILDALGLGLFVCVGVSIALSAHISFTGAVILGVVTGTVGGIIRDLLAGEIPTVLVKDFYALICVVGGIL
YVYLHHLNVPHDITLLVSASVIFFLRLAAIKLKWNFVKASRSSLLQ

Sequences:

>Translated_206_residues
MTLLSLLDMIGTFAFALTGALVAVRKEMDLYGILLLSFVTAIGGGTTRDLLLGNTPVFFLNQPSYFYISLLAGFCTFLFH
KELFKINSIILILDALGLGLFVCVGVSIALSAHISFTGAVILGVVTGTVGGIIRDLLAGEIPTVLVKDFYALICVVGGIL
YVYLHHLNVPHDITLLVSASVIFFLRLAAIKLKWNFVKASRSSLLQ
>Mature_205_residues
TLLSLLDMIGTFAFALTGALVAVRKEMDLYGILLLSFVTAIGGGTTRDLLLGNTPVFFLNQPSYFYISLLAGFCTFLFHK
ELFKINSIILILDALGLGLFVCVGVSIALSAHISFTGAVILGVVTGTVGGIIRDLLAGEIPTVLVKDFYALICVVGGILY
VYLHHLNVPHDITLLVSASVIFFLRLAAIKLKWNFVKASRSSLLQ

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=191, Percent_Identity=38.7434554973822, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI87082304, Length=174, Percent_Identity=36.7816091954023, Blast_Score=117, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 22227; Mature: 22096

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLSLLDMIGTFAFALTGALVAVRKEMDLYGILLLSFVTAIGGGTTRDLLLGNTPVFFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCEEEE
NQPSYFYISLLAGFCTFLFHKELFKINSIILILDALGLGLFVCVGVSIALSAHISFTGAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILGVVTGTVGGIIRDLLAGEIPTVLVKDFYALICVVGGILYVYLHHLNVPHDITLLVSAS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VIFFLRLAAIKLKWNFVKASRSSLLQ
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLLSLLDMIGTFAFALTGALVAVRKEMDLYGILLLSFVTAIGGGTTRDLLLGNTPVFFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCEEEE
NQPSYFYISLLAGFCTFLFHKELFKINSIILILDALGLGLFVCVGVSIALSAHISFTGAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILGVVTGTVGGIIRDLLAGEIPTVLVKDFYALICVVGGILYVYLHHLNVPHDITLLVSAS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VIFFLRLAAIKLKWNFVKASRSSLLQ
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA