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The map label for this gene is yfmS [H]

Identifier: 134298471

GI number: 134298471

Start: 646316

End: 647146

Strand: Reverse

Name: yfmS [H]

Synonym: Dred_0600

Alternate gene names: 134298471

Gene position: 647146-646316 (Counterclockwise)

Preceding gene: 134298488

Following gene: 134298470

Centisome position: 17.94

GC content: 40.07

Gene sequence:

>831_bases
ATGAGTGAAATTAATTGGGATGAACTTGTAAGCCTAATCGATTGTGTAAAAAAGACATTAGGTTCTGATAGTGCAATTTC
TCTAACAGACTTAGAGAAATTCCATTATTACTCTCCCGGTGTCCAGTTAAACCATTACGTTAATCCAGGAGACCTAATTA
AGCCTGGCAGTACAACCCATCAGGTTATACAAAACAGAAACAGAATTAGCACTAAGATAACAGATATATCCATTTACGGT
GTAGCTTATTTAGCAAGGTGTGCTCCCTTATATAGCAAAGAGGGCAACTTAATTGGCACAGTGGGTATCTTTCAGCCTAC
CACAATGCAAGACACTCTCTTTGAGGGCGCCAATAAATTGGATCAAACATTGAACACGATTGGAGAAACTACCACTGGAT
TATCCGCTGCCTCTGAACAACTGGCTGCCACTGCTACAAATCTCTCTGGACAAGCAGACTCAATCAATGCAAACGTACAG
AAAACCGATATGGTTTTAAACCTTATTAAAGACGTGGCTTCCCAAACCCATCTCCTTGGTCTTAATGCTGCCATCGAAGC
AGCCCGGGCCGGTGATCAAGGTCGAGGTTTCAATGTTGTAGCAGAAGAAATACGGAAACTTGCTGGTAGAACCACAGGGT
CTGTTAAAGAAATAACAGATATCCTTTCTCAGATACAAATCTCTATAAATGATCTTGGTGAACAAATTCATCAATTAGCC
GCCGTTACAGAAGAACAGACCGCATCTGCACAAGAAATTTCTGCATCAGTCAATGATATTGTTTTTATGTCCAGTAAATT
AAAAAAACTAGCCGAAGAAATCTGCAATTAG

Upstream 100 bases:

>100_bases
AACATTTATTTACACGGAAATAATTAAATCGAATTATCTGAATAGTTGCAGGACTTTTTATCTGCTATAAAGAATAAAAA
TGGCATTGGGGGTGGCATTG

Downstream 100 bases:

>100_bases
CCCTCAGTTTAACTGAGGGTTTTATTTATCACTGCATACCTTGACCAAACGTTCTCCCTCTGTAAAAATTTATATGATCA
GTGTACATACATTAAGTGTT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MSEINWDELVSLIDCVKKTLGSDSAISLTDLEKFHYYSPGVQLNHYVNPGDLIKPGSTTHQVIQNRNRISTKITDISIYG
VAYLARCAPLYSKEGNLIGTVGIFQPTTMQDTLFEGANKLDQTLNTIGETTTGLSAASEQLAATATNLSGQADSINANVQ
KTDMVLNLIKDVASQTHLLGLNAAIEAARAGDQGRGFNVVAEEIRKLAGRTTGSVKEITDILSQIQISINDLGEQIHQLA
AVTEEQTASAQEISASVNDIVFMSSKLKKLAEEICN

Sequences:

>Translated_276_residues
MSEINWDELVSLIDCVKKTLGSDSAISLTDLEKFHYYSPGVQLNHYVNPGDLIKPGSTTHQVIQNRNRISTKITDISIYG
VAYLARCAPLYSKEGNLIGTVGIFQPTTMQDTLFEGANKLDQTLNTIGETTTGLSAASEQLAATATNLSGQADSINANVQ
KTDMVLNLIKDVASQTHLLGLNAAIEAARAGDQGRGFNVVAEEIRKLAGRTTGSVKEITDILSQIQISINDLGEQIHQLA
AVTEEQTASAQEISASVNDIVFMSSKLKKLAEEICN
>Mature_275_residues
SEINWDELVSLIDCVKKTLGSDSAISLTDLEKFHYYSPGVQLNHYVNPGDLIKPGSTTHQVIQNRNRISTKITDISIYGV
AYLARCAPLYSKEGNLIGTVGIFQPTTMQDTLFEGANKLDQTLNTIGETTTGLSAASEQLAATATNLSGQADSINANVQK
TDMVLNLIKDVASQTHLLGLNAAIEAARAGDQGRGFNVVAEEIRKLAGRTTGSVKEITDILSQIQISINDLGEQIHQLAA
VTEEQTASAQEISASVNDIVFMSSKLKKLAEEICN

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=172, Percent_Identity=29.0697674418605, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787690, Length=80, Percent_Identity=46.25, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788194, Length=123, Percent_Identity=37.3983739837398, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI2367378, Length=68, Percent_Identity=48.5294117647059, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1788195, Length=58, Percent_Identity=53.448275862069, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089 [H]

Pfam domain/function: PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 29684; Mature: 29553

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEINWDELVSLIDCVKKTLGSDSAISLTDLEKFHYYSPGVQLNHYVNPGDLIKPGSTTH
CCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHH
QVIQNRNRISTKITDISIYGVAYLARCAPLYSKEGNLIGTVGIFQPTTMQDTLFEGANKL
HHHHCCHHHHHEEHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHH
DQTLNTIGETTTGLSAASEQLAATATNLSGQADSINANVQKTDMVLNLIKDVASQTHLLG
HHHHHHHHCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEH
LNAAIEAARAGDQGRGFNVVAEEIRKLAGRTTGSVKEITDILSQIQISINDLGEQIHQLA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AVTEEQTASAQEISASVNDIVFMSSKLKKLAEEICN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEINWDELVSLIDCVKKTLGSDSAISLTDLEKFHYYSPGVQLNHYVNPGDLIKPGSTTH
CCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHH
QVIQNRNRISTKITDISIYGVAYLARCAPLYSKEGNLIGTVGIFQPTTMQDTLFEGANKL
HHHHCCHHHHHEEHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHH
DQTLNTIGETTTGLSAASEQLAATATNLSGQADSINANVQKTDMVLNLIKDVASQTHLLG
HHHHHHHHCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEH
LNAAIEAARAGDQGRGFNVVAEEIRKLAGRTTGSVKEITDILSQIQISINDLGEQIHQLA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AVTEEQTASAQEISASVNDIVFMSSKLKKLAEEICN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]