Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

Click here to switch to the map view.

The map label for this gene is arsR [C]

Identifier: 134298432

GI number: 134298432

Start: 601811

End: 602182

Strand: Reverse

Name: arsR [C]

Synonym: Dred_0559

Alternate gene names: 134298432

Gene position: 602182-601811 (Counterclockwise)

Preceding gene: 134298435

Following gene: 134298431

Centisome position: 16.69

GC content: 44.62

Gene sequence:

>372_bases
ATGGAAAGGTTAGTGAATCTTTATAAGGCTCTGGGGGATGCCCATCGGTTAAACATCCTGCAAATGCTGTCCGGGCAGGA
ACTGAGCGTCTGCGAAATTATGCAAGGTCTAAACATCTCCCAGCCAGCGGTGTCACACCATTTAAAAATCTTACGTCAGG
CGGATTTAATCGAAAACATCAAGCACGGCAAGCTAGTGCTGTACACCCTGAAAGCCTGTGGCTTACAAAAGATTTATCCA
CTGGTAGATCAACATCTGGGAAAATTGCTGCAAGCTACCACCACTGATGTCAAACCCTCAGCCCTACGAGAGACCCCTAA
TTATTGTGAACTGATGGGCTTAAAAAAATCTGTCTGTGAAAAAGATGAATAA

Upstream 100 bases:

>100_bases
CCGTTAAAAAAAGTTAACGGATAACAAGTTGATTATATCATCAAATAGTAATATAATAAATAATCATATTTAAAAATTTA
AATATATAAGGTGGTGAGAT

Downstream 100 bases:

>100_bases
GGAGGAATTCTGTATATGGCAGAAAAAAGACTGTCTACCCTGGACCGTTTTCTAACCCTGTGGATTTTCCTAGCAATGGC
CATTGGGGTAGGTCTGGGTT

Product: regulatory protein ArsR

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MERLVNLYKALGDAHRLNILQMLSGQELSVCEIMQGLNISQPAVSHHLKILRQADLIENIKHGKLVLYTLKACGLQKIYP
LVDQHLGKLLQATTTDVKPSALRETPNYCELMGLKKSVCEKDE

Sequences:

>Translated_123_residues
MERLVNLYKALGDAHRLNILQMLSGQELSVCEIMQGLNISQPAVSHHLKILRQADLIENIKHGKLVLYTLKACGLQKIYP
LVDQHLGKLLQATTTDVKPSALRETPNYCELMGLKKSVCEKDE
>Mature_123_residues
MERLVNLYKALGDAHRLNILQMLSGQELSVCEIMQGLNISQPAVSHHLKILRQADLIENIKHGKLVLYTLKACGLQKIYP
LVDQHLGKLLQATTTDVKPSALRETPNYCELMGLKKSVCEKDE

Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13822; Mature: 13822

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLVNLYKALGDAHRLNILQMLSGQELSVCEIMQGLNISQPAVSHHLKILRQADLIENI
CHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
KHGKLVLYTLKACGLQKIYPLVDQHLGKLLQATTTDVKPSALRETPNYCELMGLKKSVCE
CCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCC
KDE
CCC
>Mature Secondary Structure
MERLVNLYKALGDAHRLNILQMLSGQELSVCEIMQGLNISQPAVSHHLKILRQADLIENI
CHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
KHGKLVLYTLKACGLQKIYPLVDQHLGKLLQATTTDVKPSALRETPNYCELMGLKKSVCE
CCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCC
KDE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA