| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134298358
Identifier: 134298358
GI number: 134298358
Start: 525291
End: 525677
Strand: Reverse
Name: 134298358
Synonym: Dred_0483
Alternate gene names: NA
Gene position: 525677-525291 (Counterclockwise)
Preceding gene: 134298359
Following gene: 134298357
Centisome position: 14.57
GC content: 39.28
Gene sequence:
>387_bases ATGCATAAAAGTCCACGGGTTCTTTGTGAAGTAAACACCTGCACACATTGGCTACTAGGAAATCTTTGTACTGCGGCAAA TATTGATATCCTGTACGAAGAGGAAGGAAAAATGGCCCAGAAGGATGCCCATACAGAATGCAAGACCTTTTATAAAAAGA ATGGAATTACCAGCTACCTAGGATCAATGGATAATGTCAATTGGGGTGGACTTGTCAGTGGTTCCTTCCGAGAGGGTCAA CAAATTACTCCTGCTGTGGTTTGTATTGTAGAAAGCTGTAAATATTGGGCTAAAGGAAATCTTTGTGAAGCTGAGACAAT TCAGGTAAGCGGCCAAAATGCCAATGAATGTCAAGATACAAATTGTAAAACTTTTGAAGAAAAATAA
Upstream 100 bases:
>100_bases AAACTTGAAATTAAACCCCTTTGGTATTCCTCTCTTTGCCAAGGCTTATATTCAGTAATAATTTGGGCAGACTACATTAA AAAACACGAGGTGAAATTCC
Downstream 100 bases:
>100_bases AGAAGTTACAAAAAATATGCATATGTTTTATTAAATGGAAAAAAATATAATTAGGCTAAGCCTAATATATTTTAGGAGGT AATTCCATGCAAAACATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MHKSPRVLCEVNTCTHWLLGNLCTAANIDILYEEEGKMAQKDAHTECKTFYKKNGITSYLGSMDNVNWGGLVSGSFREGQ QITPAVVCIVESCKYWAKGNLCEAETIQVSGQNANECQDTNCKTFEEK
Sequences:
>Translated_128_residues MHKSPRVLCEVNTCTHWLLGNLCTAANIDILYEEEGKMAQKDAHTECKTFYKKNGITSYLGSMDNVNWGGLVSGSFREGQ QITPAVVCIVESCKYWAKGNLCEAETIQVSGQNANECQDTNCKTFEEK >Mature_128_residues MHKSPRVLCEVNTCTHWLLGNLCTAANIDILYEEEGKMAQKDAHTECKTFYKKNGITSYLGSMDNVNWGGLVSGSFREGQ QITPAVVCIVESCKYWAKGNLCEAETIQVSGQNANECQDTNCKTFEEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14249; Mature: 14249
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 7.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKSPRVLCEVNTCTHWLLGNLCTAANIDILYEEEGKMAQKDAHTECKTFYKKNGITSYL CCCCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCHHCCHHHHHHHHHHCCHHHHH GSMDNVNWGGLVSGSFREGQQITPAVVCIVESCKYWAKGNLCEAETIQVSGQNANECQDT CCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC NCKTFEEK CCCCCCCC >Mature Secondary Structure MHKSPRVLCEVNTCTHWLLGNLCTAANIDILYEEEGKMAQKDAHTECKTFYKKNGITSYL CCCCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCHHCCHHHHHHHHHHCCHHHHH GSMDNVNWGGLVSGSFREGQQITPAVVCIVESCKYWAKGNLCEAETIQVSGQNANECQDT CCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC NCKTFEEK CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA