| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134298255
Identifier: 134298255
GI number: 134298255
Start: 402784
End: 403617
Strand: Reverse
Name: 134298255
Synonym: Dred_0378
Alternate gene names: NA
Gene position: 403617-402784 (Counterclockwise)
Preceding gene: 134298256
Following gene: 134298254
Centisome position: 11.19
GC content: 28.54
Gene sequence:
>834_bases ATGAAATCAAATATTAAGGAGATGTTTCCTGTTTGGGTAAATGATAATAAATACTATGATTTAATTCTAAGTAATGATTT AGATAGTTTCTTTAGTTGTCAGTTATTGGAAATGATTAAAGGATGGAAGGTAAATTTCTTCAATAGTGATTTTAAGGCGT TAGGTATAACCGAGAACGCTAGTAACGAAAGTGATGTAATTGGCGTTGACCTTTCCCTATGTTCTGGGAAAACATTTGAC AATCATGTAGTAATGATGAACCAAGATGATGATTATAATTATAATTCAGCCAACTTCAATATAATAGATAGAATTAGCAG GGAGAATTATTTCTCTAAGTATTGTGGCTCAACATTATTAACAATATGGAGTTTGTATAATATTCCACTTCCAAAATCAG AAGAAGCAAAAATGATTTTATTGTGTATAGATTCGACATTCAAAGGATTTTACAGTCCTTATCCAATGCCTAAAGAAGCA AATAAAAAATATTTAGTTGATTATATGGATTTTCCAGAATTATACGAGTGCCTACAAAGACACAAACAATATGAATTTTT AAACCTAATTAGCAAATATAATCTTGCTGGAAAAATTAAACCAAAACAAGGATATTTACATACGGATATTAACTTGAAAG CATTAAGGGAGGTTTTTGACCTTCCTTTTTTGTTGCCCAAAAATAGATTCTACAAGAAAGAAGAATATGAAACTTATGTC AATAGATTACCTAGAAATGATTATAGGTTAGTTAAAGATGATATTTCTGAATGTATGTATTCTATTGCATTAACTAATAG AGATTTTATTAGTTATAGCGAACGAATTGAATAA
Upstream 100 bases:
>100_bases CACCTTGGAATGTAGAAAGAAGTGGAGGTGAATATTTGTTCTAACCTTGAATGGTTAAATTCTATACTCACATATCACAA TAGACAGCAACATATATAAA
Downstream 100 bases:
>100_bases TTAATATTTAACCAGAGGGCTCATGTCGTGAGACAGCAATAAGTCCCTCTCTTTTTTTATGTCATTTTTTTAGAAAAGGA GAGGAAATTTAATATGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKSNIKEMFPVWVNDNKYYDLILSNDLDSFFSCQLLEMIKGWKVNFFNSDFKALGITENASNESDVIGVDLSLCSGKTFD NHVVMMNQDDDYNYNSANFNIIDRISRENYFSKYCGSTLLTIWSLYNIPLPKSEEAKMILLCIDSTFKGFYSPYPMPKEA NKKYLVDYMDFPELYECLQRHKQYEFLNLISKYNLAGKIKPKQGYLHTDINLKALREVFDLPFLLPKNRFYKKEEYETYV NRLPRNDYRLVKDDISECMYSIALTNRDFISYSERIE
Sequences:
>Translated_277_residues MKSNIKEMFPVWVNDNKYYDLILSNDLDSFFSCQLLEMIKGWKVNFFNSDFKALGITENASNESDVIGVDLSLCSGKTFD NHVVMMNQDDDYNYNSANFNIIDRISRENYFSKYCGSTLLTIWSLYNIPLPKSEEAKMILLCIDSTFKGFYSPYPMPKEA NKKYLVDYMDFPELYECLQRHKQYEFLNLISKYNLAGKIKPKQGYLHTDINLKALREVFDLPFLLPKNRFYKKEEYETYV NRLPRNDYRLVKDDISECMYSIALTNRDFISYSERIE >Mature_277_residues MKSNIKEMFPVWVNDNKYYDLILSNDLDSFFSCQLLEMIKGWKVNFFNSDFKALGITENASNESDVIGVDLSLCSGKTFD NHVVMMNQDDDYNYNSANFNIIDRISRENYFSKYCGSTLLTIWSLYNIPLPKSEEAKMILLCIDSTFKGFYSPYPMPKEA NKKYLVDYMDFPELYECLQRHKQYEFLNLISKYNLAGKIKPKQGYLHTDINLKALREVFDLPFLLPKNRFYKKEEYETYV NRLPRNDYRLVKDDISECMYSIALTNRDFISYSERIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32815; Mature: 32815
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSNIKEMFPVWVNDNKYYDLILSNDLDSFFSCQLLEMIKGWKVNFFNSDFKALGITENA CCCCCCHHCCEEECCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCC SNESDVIGVDLSLCSGKTFDNHVVMMNQDDDYNYNSANFNIIDRISRENYFSKYCGSTLL CCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TIWSLYNIPLPKSEEAKMILLCIDSTFKGFYSPYPMPKEANKKYLVDYMDFPELYECLQR HHHHHHCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHH HKQYEFLNLISKYNLAGKIKPKQGYLHTDINLKALREVFDLPFLLPKNRFYKKEEYETYV HHHHHHHHHHHHCCCCEEECCCCCEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHH NRLPRNDYRLVKDDISECMYSIALTNRDFISYSERIE HHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure MKSNIKEMFPVWVNDNKYYDLILSNDLDSFFSCQLLEMIKGWKVNFFNSDFKALGITENA CCCCCCHHCCEEECCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCC SNESDVIGVDLSLCSGKTFDNHVVMMNQDDDYNYNSANFNIIDRISRENYFSKYCGSTLL CCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TIWSLYNIPLPKSEEAKMILLCIDSTFKGFYSPYPMPKEANKKYLVDYMDFPELYECLQR HHHHHHCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHH HKQYEFLNLISKYNLAGKIKPKQGYLHTDINLKALREVFDLPFLLPKNRFYKKEEYETYV HHHHHHHHHHHHCCCCEEECCCCCEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHH NRLPRNDYRLVKDDISECMYSIALTNRDFISYSERIE HHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA