Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

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The map label for this gene is 134298256

Identifier: 134298256

GI number: 134298256

Start: 404147

End: 405004

Strand: Reverse

Name: 134298256

Synonym: Dred_0379

Alternate gene names: NA

Gene position: 405004-404147 (Counterclockwise)

Preceding gene: 134298257

Following gene: 134298255

Centisome position: 11.22

GC content: 34.15

Gene sequence:

>858_bases
ATGTTTACACAAGATAAGTTTGTTGCTGGTCAATCTATTGATATGAAAGATGTTCTGATTCAAACTACACCTATTTTAAC
TCCCTTTACAACTTTACTATTACCCAAAACCGTTAAGGCAGAAAATGCCACTTTAAATTGGATTGAGGAAGCAATTAACG
AGAGTGCCGCTGTAACTTTGGGAGAAGGTGCAGATGCTCCTAATCCTGTAGATGATACCCTAGCACCTATCAGCAACTAT
TGCGAATTGATTGGGGCTACTGCAACGGTTTCTAATACTGCCCAAGCCACAAATGCTAAAGGTATCTCTGATTTATTGGC
ACATGAAATCGTGAAAAAAACTAAGGCAATGAAAATTAAAATGGAAAATATTTTAATCAATGGTACTAAGGGATATGTTT
CCGCAACTAAAACATATACCACAGATGGTATTTTGGCACAGATTAATCCTGTAAACCAAGTTACCAATGCTACTTTTACT
AAGACAAAATTTGAGGAAGTTGTTTCTAAAATGTATGATGCAGGAGTTAATGATGAAATGCTTTGTTTCTTACCTGCACA
AATGAAAATTCAACTAAATAGTTTTAGTAATGTTGAATTTTTGGCACGTGATATGTTTTTAGGTTTTGACACTGAAAGAT
ATGTTACCCCTTATGGTATCGTAACTTTTGTATTATCTGAAAAATTAAACAATAAATTATTTATTGTGAATCCTAACTAT
CTCGAATTGGCAGAATTAATTCCCTTCCATGCTACAGTAGAACCTGTTTCTGGTAGCAAGCAATCTATATACCTTGAAAC
TCAATTTGGCTTAAAACTATTAAATACTAAGGCAGCAGCCAGTTTTGCAATTTCCTAG

Upstream 100 bases:

>100_bases
GACAGTTACACCCAAGCCAAGAAAAATAACGATACCCTTGGTATGGTGAAAGCATTATTTAGCAAGTAATAAAAAATAAA
AATTTAGGAGGATGATATTT

Downstream 100 bases:

>100_bases
TTTATTTTCTTATGCCTAATTGGTCAGTAAAGGTCAAGGGGGACGGTTTAATACCGTCCCCCCTCTATTTAATGAAAGGG
GTGACTATTTTGAACAAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MFTQDKFVAGQSIDMKDVLIQTTPILTPFTTLLLPKTVKAENATLNWIEEAINESAAVTLGEGADAPNPVDDTLAPISNY
CELIGATATVSNTAQATNAKGISDLLAHEIVKKTKAMKIKMENILINGTKGYVSATKTYTTDGILAQINPVNQVTNATFT
KTKFEEVVSKMYDAGVNDEMLCFLPAQMKIQLNSFSNVEFLARDMFLGFDTERYVTPYGIVTFVLSEKLNNKLFIVNPNY
LELAELIPFHATVEPVSGSKQSIYLETQFGLKLLNTKAAASFAIS

Sequences:

>Translated_285_residues
MFTQDKFVAGQSIDMKDVLIQTTPILTPFTTLLLPKTVKAENATLNWIEEAINESAAVTLGEGADAPNPVDDTLAPISNY
CELIGATATVSNTAQATNAKGISDLLAHEIVKKTKAMKIKMENILINGTKGYVSATKTYTTDGILAQINPVNQVTNATFT
KTKFEEVVSKMYDAGVNDEMLCFLPAQMKIQLNSFSNVEFLARDMFLGFDTERYVTPYGIVTFVLSEKLNNKLFIVNPNY
LELAELIPFHATVEPVSGSKQSIYLETQFGLKLLNTKAAASFAIS
>Mature_285_residues
MFTQDKFVAGQSIDMKDVLIQTTPILTPFTTLLLPKTVKAENATLNWIEEAINESAAVTLGEGADAPNPVDDTLAPISNY
CELIGATATVSNTAQATNAKGISDLLAHEIVKKTKAMKIKMENILINGTKGYVSATKTYTTDGILAQINPVNQVTNATFT
KTKFEEVVSKMYDAGVNDEMLCFLPAQMKIQLNSFSNVEFLARDMFLGFDTERYVTPYGIVTFVLSEKLNNKLFIVNPNY
LELAELIPFHATVEPVSGSKQSIYLETQFGLKLLNTKAAASFAIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31171; Mature: 31171

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTQDKFVAGQSIDMKDVLIQTTPILTPFTTLLLPKTVKAENATLNWIEEAINESAAVTL
CCCCCCCCCCCCCCHHHHHEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEE
GEGADAPNPVDDTLAPISNYCELIGATATVSNTAQATNAKGISDLLAHEIVKKTKAMKIK
CCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHEEE
MENILINGTKGYVSATKTYTTDGILAQINPVNQVTNATFTKTKFEEVVSKMYDAGVNDEM
EEEEEEECCCCEEEECEEEECCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCE
LCFLPAQMKIQLNSFSNVEFLARDMFLGFDTERYVTPYGIVTFVLSEKLNNKLFIVNPNY
EEEECCEEEEEECCCCCHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHCCEEEEECCCH
LELAELIPFHATVEPVSGSKQSIYLETQFGLKLLNTKAAASFAIS
HHHHHHCCCCEEECCCCCCCCEEEEEEECCEEEECCHHHHEEECC
>Mature Secondary Structure
MFTQDKFVAGQSIDMKDVLIQTTPILTPFTTLLLPKTVKAENATLNWIEEAINESAAVTL
CCCCCCCCCCCCCCHHHHHEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEE
GEGADAPNPVDDTLAPISNYCELIGATATVSNTAQATNAKGISDLLAHEIVKKTKAMKIK
CCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHEEE
MENILINGTKGYVSATKTYTTDGILAQINPVNQVTNATFTKTKFEEVVSKMYDAGVNDEM
EEEEEEECCCCEEEECEEEECCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCE
LCFLPAQMKIQLNSFSNVEFLARDMFLGFDTERYVTPYGIVTFVLSEKLNNKLFIVNPNY
EEEECCEEEEEECCCCCHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHCCEEEEECCCH
LELAELIPFHATVEPVSGSKQSIYLETQFGLKLLNTKAAASFAIS
HHHHHHCCCCEEECCCCCCCCEEEEEEECCEEEECCHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA