| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
Click here to switch to the map view.
The map label for this gene is 134298256
Identifier: 134298256
GI number: 134298256
Start: 404147
End: 405004
Strand: Reverse
Name: 134298256
Synonym: Dred_0379
Alternate gene names: NA
Gene position: 405004-404147 (Counterclockwise)
Preceding gene: 134298257
Following gene: 134298255
Centisome position: 11.22
GC content: 34.15
Gene sequence:
>858_bases ATGTTTACACAAGATAAGTTTGTTGCTGGTCAATCTATTGATATGAAAGATGTTCTGATTCAAACTACACCTATTTTAAC TCCCTTTACAACTTTACTATTACCCAAAACCGTTAAGGCAGAAAATGCCACTTTAAATTGGATTGAGGAAGCAATTAACG AGAGTGCCGCTGTAACTTTGGGAGAAGGTGCAGATGCTCCTAATCCTGTAGATGATACCCTAGCACCTATCAGCAACTAT TGCGAATTGATTGGGGCTACTGCAACGGTTTCTAATACTGCCCAAGCCACAAATGCTAAAGGTATCTCTGATTTATTGGC ACATGAAATCGTGAAAAAAACTAAGGCAATGAAAATTAAAATGGAAAATATTTTAATCAATGGTACTAAGGGATATGTTT CCGCAACTAAAACATATACCACAGATGGTATTTTGGCACAGATTAATCCTGTAAACCAAGTTACCAATGCTACTTTTACT AAGACAAAATTTGAGGAAGTTGTTTCTAAAATGTATGATGCAGGAGTTAATGATGAAATGCTTTGTTTCTTACCTGCACA AATGAAAATTCAACTAAATAGTTTTAGTAATGTTGAATTTTTGGCACGTGATATGTTTTTAGGTTTTGACACTGAAAGAT ATGTTACCCCTTATGGTATCGTAACTTTTGTATTATCTGAAAAATTAAACAATAAATTATTTATTGTGAATCCTAACTAT CTCGAATTGGCAGAATTAATTCCCTTCCATGCTACAGTAGAACCTGTTTCTGGTAGCAAGCAATCTATATACCTTGAAAC TCAATTTGGCTTAAAACTATTAAATACTAAGGCAGCAGCCAGTTTTGCAATTTCCTAG
Upstream 100 bases:
>100_bases GACAGTTACACCCAAGCCAAGAAAAATAACGATACCCTTGGTATGGTGAAAGCATTATTTAGCAAGTAATAAAAAATAAA AATTTAGGAGGATGATATTT
Downstream 100 bases:
>100_bases TTTATTTTCTTATGCCTAATTGGTCAGTAAAGGTCAAGGGGGACGGTTTAATACCGTCCCCCCTCTATTTAATGAAAGGG GTGACTATTTTGAACAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MFTQDKFVAGQSIDMKDVLIQTTPILTPFTTLLLPKTVKAENATLNWIEEAINESAAVTLGEGADAPNPVDDTLAPISNY CELIGATATVSNTAQATNAKGISDLLAHEIVKKTKAMKIKMENILINGTKGYVSATKTYTTDGILAQINPVNQVTNATFT KTKFEEVVSKMYDAGVNDEMLCFLPAQMKIQLNSFSNVEFLARDMFLGFDTERYVTPYGIVTFVLSEKLNNKLFIVNPNY LELAELIPFHATVEPVSGSKQSIYLETQFGLKLLNTKAAASFAIS
Sequences:
>Translated_285_residues MFTQDKFVAGQSIDMKDVLIQTTPILTPFTTLLLPKTVKAENATLNWIEEAINESAAVTLGEGADAPNPVDDTLAPISNY CELIGATATVSNTAQATNAKGISDLLAHEIVKKTKAMKIKMENILINGTKGYVSATKTYTTDGILAQINPVNQVTNATFT KTKFEEVVSKMYDAGVNDEMLCFLPAQMKIQLNSFSNVEFLARDMFLGFDTERYVTPYGIVTFVLSEKLNNKLFIVNPNY LELAELIPFHATVEPVSGSKQSIYLETQFGLKLLNTKAAASFAIS >Mature_285_residues MFTQDKFVAGQSIDMKDVLIQTTPILTPFTTLLLPKTVKAENATLNWIEEAINESAAVTLGEGADAPNPVDDTLAPISNY CELIGATATVSNTAQATNAKGISDLLAHEIVKKTKAMKIKMENILINGTKGYVSATKTYTTDGILAQINPVNQVTNATFT KTKFEEVVSKMYDAGVNDEMLCFLPAQMKIQLNSFSNVEFLARDMFLGFDTERYVTPYGIVTFVLSEKLNNKLFIVNPNY LELAELIPFHATVEPVSGSKQSIYLETQFGLKLLNTKAAASFAIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31171; Mature: 31171
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTQDKFVAGQSIDMKDVLIQTTPILTPFTTLLLPKTVKAENATLNWIEEAINESAAVTL CCCCCCCCCCCCCCHHHHHEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEE GEGADAPNPVDDTLAPISNYCELIGATATVSNTAQATNAKGISDLLAHEIVKKTKAMKIK CCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHEEE MENILINGTKGYVSATKTYTTDGILAQINPVNQVTNATFTKTKFEEVVSKMYDAGVNDEM EEEEEEECCCCEEEECEEEECCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCE LCFLPAQMKIQLNSFSNVEFLARDMFLGFDTERYVTPYGIVTFVLSEKLNNKLFIVNPNY EEEECCEEEEEECCCCCHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHCCEEEEECCCH LELAELIPFHATVEPVSGSKQSIYLETQFGLKLLNTKAAASFAIS HHHHHHCCCCEEECCCCCCCCEEEEEEECCEEEECCHHHHEEECC >Mature Secondary Structure MFTQDKFVAGQSIDMKDVLIQTTPILTPFTTLLLPKTVKAENATLNWIEEAINESAAVTL CCCCCCCCCCCCCCHHHHHEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEE GEGADAPNPVDDTLAPISNYCELIGATATVSNTAQATNAKGISDLLAHEIVKKTKAMKIK CCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHEEE MENILINGTKGYVSATKTYTTDGILAQINPVNQVTNATFTKTKFEEVVSKMYDAGVNDEM EEEEEEECCCCEEEECEEEECCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCE LCFLPAQMKIQLNSFSNVEFLARDMFLGFDTERYVTPYGIVTFVLSEKLNNKLFIVNPNY EEEECCEEEEEECCCCCHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHCCEEEEECCCH LELAELIPFHATVEPVSGSKQSIYLETQFGLKLLNTKAAASFAIS HHHHHHCCCCEEECCCCCCCCEEEEEEECCEEEECCHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA