| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134298252
Identifier: 134298252
GI number: 134298252
Start: 398514
End: 400094
Strand: Reverse
Name: 134298252
Synonym: Dred_0375
Alternate gene names: NA
Gene position: 400094-398514 (Counterclockwise)
Preceding gene: 134298253
Following gene: 134298251
Centisome position: 11.09
GC content: 33.14
Gene sequence:
>1581_bases ATGGCAAGAACCGTTAAATCAACTTCCGATAAACTAAAGATAATTAATGCTGATTTTAAATTATGGGCTAAGAATTTTGT AAAGATAGTTGATAATAATGGAGATGAAATTCCTTTTATCTTGAATGAGCAACAAGATTATTTTTATCAGAACATGGATA AATTTAATATAATCAGCAAGAGCCGCCAATTAGGATTTACGACATATAGTTTGGCATATTGTTTGTGGCTTGCTTGCACT AGAGCAAATACTAACTGTCTGATAGTTTCATACAATGTAGAATCAACACAATCCATTTTTGAGAGATTAAAACAAATGTA TGCTTCTATTCCAGATAAATATAAGCCAGCGGAAAAACGTAATAACCGTATTGAATTATTGTTAGAAAATAATTCAAGAA TTATCGTTAAGACCGCAGGAAATAAATCCTTGGGGCGTGGTATGACGCTTCAGTATGTTCTATTGAGCGAATTTGCCTTT TATCCAGACGATCAACAAAGAGATTCATTAGTTAGTTTGGAGCAAGCACTAGCCAAGAATAATGACAGTAAGATAGTTAT TGAGACAACTTCTAATGGTTACAATTATTACCAAAAATTATTTATGTCTGCCTATAAAGGTAATTCAAAATATAAAAGTT TCTTTTTTCCTTGGTTTTCTTCTGCTATAAGTAAACAATTTAAGCATGAGATAGAATTGGCTGAGAAATGGTTTAGAGCA AACAATAAAGGTCATAGAATGGAGCCAGAACATTTAGAGCGTGATGAGGTTGCCCTTCGAGAAAAAGGAATCTCCTTTAA ATTGTTAATGTGGAGAAGGTGGAAACTAGAGGATATTGACACTGAGGATTTTCAGCAAGAATATCCAAGTACGCCAGAGG AAAGTTTTAAGGCCACAAGTCGATCAGTTTTTGATACGCAGAAAATTACGGAGCGAATTAATTATATCCTTCTTCCCCTT CGAGTGAATGAAGTGAATAAAAAATTATCGCAAACTCTTGATTCTTATTTGAACAAGAGTTTTTTTATTTACCGAAATGT TAAATCTAACGAGCGATATTTTATCGGCGTTGATACTTCTTCTGGTAGTGGTGGAGATTATTCTGCTGTCAGTGTATTCG ATAGCCAGGGGGAGCAAATAGCAACATTCTATGATAATAAAATTCCTGTCTATAAATTTGCCCAGGTAGTTTATGACATT GGAATGTATTTTAATTATGGTTTCTTAGTTGTTGAGAAAAATTCCTTTGGACAATCAGTAATTGAAAAGTTAAGGACTGA GTTTGGATATTTGAATATGTACAAGATGAAGCAGTTTGATGAAAGAGGACGTAAGCGATATAAAATTGGATGGGTTACTA CCAGCGTCACTAAACCTAAATTAATTAGTGATTATAAAGAGCAGTTTGAAATGGACTTAATTCTATTGAATGATAATGAG ACATTAGAAGAAATGAAAATATTTACAAGTTATGAAAACGGTAAGACAGGAAATATCAGAGGTGAAGGTTTCCATGATGA TATGGTTATTGCTTCTGCATTAGCCATACAAGGGATGAAAAGCGGTAAATGGTATGTTTGA
Upstream 100 bases:
>100_bases CTTAAATTGCAAAAGGAGATTCAAGCCAATATTAAATCAGCAAAAAGGAAAGAAAAAGATATTGCCGATGATGATGGGCT AGAGTTGTAGGTGGTTGACA
Downstream 100 bases:
>100_bases CATTAAATTGTTTCACGTGAAACATATATTATAATTGACAACTTAATCATTTGTCAAGGTGTCAATTTTAGATAAGGAGG GGTTAACTTTGAATTTACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 526; Mature: 525
Protein sequence:
>526_residues MARTVKSTSDKLKIINADFKLWAKNFVKIVDNNGDEIPFILNEQQDYFYQNMDKFNIISKSRQLGFTTYSLAYCLWLACT RANTNCLIVSYNVESTQSIFERLKQMYASIPDKYKPAEKRNNRIELLLENNSRIIVKTAGNKSLGRGMTLQYVLLSEFAF YPDDQQRDSLVSLEQALAKNNDSKIVIETTSNGYNYYQKLFMSAYKGNSKYKSFFFPWFSSAISKQFKHEIELAEKWFRA NNKGHRMEPEHLERDEVALREKGISFKLLMWRRWKLEDIDTEDFQQEYPSTPEESFKATSRSVFDTQKITERINYILLPL RVNEVNKKLSQTLDSYLNKSFFIYRNVKSNERYFIGVDTSSGSGGDYSAVSVFDSQGEQIATFYDNKIPVYKFAQVVYDI GMYFNYGFLVVEKNSFGQSVIEKLRTEFGYLNMYKMKQFDERGRKRYKIGWVTTSVTKPKLISDYKEQFEMDLILLNDNE TLEEMKIFTSYENGKTGNIRGEGFHDDMVIASALAIQGMKSGKWYV
Sequences:
>Translated_526_residues MARTVKSTSDKLKIINADFKLWAKNFVKIVDNNGDEIPFILNEQQDYFYQNMDKFNIISKSRQLGFTTYSLAYCLWLACT RANTNCLIVSYNVESTQSIFERLKQMYASIPDKYKPAEKRNNRIELLLENNSRIIVKTAGNKSLGRGMTLQYVLLSEFAF YPDDQQRDSLVSLEQALAKNNDSKIVIETTSNGYNYYQKLFMSAYKGNSKYKSFFFPWFSSAISKQFKHEIELAEKWFRA NNKGHRMEPEHLERDEVALREKGISFKLLMWRRWKLEDIDTEDFQQEYPSTPEESFKATSRSVFDTQKITERINYILLPL RVNEVNKKLSQTLDSYLNKSFFIYRNVKSNERYFIGVDTSSGSGGDYSAVSVFDSQGEQIATFYDNKIPVYKFAQVVYDI GMYFNYGFLVVEKNSFGQSVIEKLRTEFGYLNMYKMKQFDERGRKRYKIGWVTTSVTKPKLISDYKEQFEMDLILLNDNE TLEEMKIFTSYENGKTGNIRGEGFHDDMVIASALAIQGMKSGKWYV >Mature_525_residues ARTVKSTSDKLKIINADFKLWAKNFVKIVDNNGDEIPFILNEQQDYFYQNMDKFNIISKSRQLGFTTYSLAYCLWLACTR ANTNCLIVSYNVESTQSIFERLKQMYASIPDKYKPAEKRNNRIELLLENNSRIIVKTAGNKSLGRGMTLQYVLLSEFAFY PDDQQRDSLVSLEQALAKNNDSKIVIETTSNGYNYYQKLFMSAYKGNSKYKSFFFPWFSSAISKQFKHEIELAEKWFRAN NKGHRMEPEHLERDEVALREKGISFKLLMWRRWKLEDIDTEDFQQEYPSTPEESFKATSRSVFDTQKITERINYILLPLR VNEVNKKLSQTLDSYLNKSFFIYRNVKSNERYFIGVDTSSGSGGDYSAVSVFDSQGEQIATFYDNKIPVYKFAQVVYDIG MYFNYGFLVVEKNSFGQSVIEKLRTEFGYLNMYKMKQFDERGRKRYKIGWVTTSVTKPKLISDYKEQFEMDLILLNDNET LEEMKIFTSYENGKTGNIRGEGFHDDMVIASALAIQGMKSGKWYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61501; Mature: 61369
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTVKSTSDKLKIINADFKLWAKNFVKIVDNNGDEIPFILNEQQDYFYQNMDKFNIISK CCCCCCCCCCCEEEEECCHHHHHHHHHEEECCCCCCCCEEECCCHHHHHHCCCHHHHHHH SRQLGFTTYSLAYCLWLACTRANTNCLIVSYNVESTQSIFERLKQMYASIPDKYKPAEKR CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHC NNRIELLLENNSRIIVKTAGNKSLGRGMTLQYVLLSEFAFYPDDQQRDSLVSLEQALAKN CCEEEEEEECCCEEEEEECCCCCCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHCC NDSKIVIETTSNGYNYYQKLFMSAYKGNSKYKSFFFPWFSSAISKQFKHEIELAEKWFRA CCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHC NNKGHRMEPEHLERDEVALREKGISFKLLMWRRWKLEDIDTEDFQQEYPSTPEESFKATS CCCCCCCCHHHCCHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHHHHCCCCCHHHHHHHH RSVFDTQKITERINYILLPLRVNEVNKKLSQTLDSYLNKSFFIYRNVKSNERYFIGVDTS HHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECC SGSGGDYSAVSVFDSQGEQIATFYDNKIPVYKFAQVVYDIGMYFNYGFLVVEKNSFGQSV CCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHH IEKLRTEFGYLNMYKMKQFDERGRKRYKIGWVTTSVTKPKLISDYKEQFEMDLILLNDNE HHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHCCEEEEEECCCC TLEEMKIFTSYENGKTGNIRGEGFHDDMVIASALAIQGMKSGKWYV CHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ARTVKSTSDKLKIINADFKLWAKNFVKIVDNNGDEIPFILNEQQDYFYQNMDKFNIISK CCCCCCCCCCEEEEECCHHHHHHHHHEEECCCCCCCCEEECCCHHHHHHCCCHHHHHHH SRQLGFTTYSLAYCLWLACTRANTNCLIVSYNVESTQSIFERLKQMYASIPDKYKPAEKR CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHC NNRIELLLENNSRIIVKTAGNKSLGRGMTLQYVLLSEFAFYPDDQQRDSLVSLEQALAKN CCEEEEEEECCCEEEEEECCCCCCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHCC NDSKIVIETTSNGYNYYQKLFMSAYKGNSKYKSFFFPWFSSAISKQFKHEIELAEKWFRA CCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHC NNKGHRMEPEHLERDEVALREKGISFKLLMWRRWKLEDIDTEDFQQEYPSTPEESFKATS CCCCCCCCHHHCCHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHHHHCCCCCHHHHHHHH RSVFDTQKITERINYILLPLRVNEVNKKLSQTLDSYLNKSFFIYRNVKSNERYFIGVDTS HHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECC SGSGGDYSAVSVFDSQGEQIATFYDNKIPVYKFAQVVYDIGMYFNYGFLVVEKNSFGQSV CCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHH IEKLRTEFGYLNMYKMKQFDERGRKRYKIGWVTTSVTKPKLISDYKEQFEMDLILLNDNE HHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHCCEEEEEECCCC TLEEMKIFTSYENGKTGNIRGEGFHDDMVIASALAIQGMKSGKWYV CHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA