| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134298251
Identifier: 134298251
GI number: 134298251
Start: 397103
End: 398425
Strand: Reverse
Name: 134298251
Synonym: Dred_0374
Alternate gene names: NA
Gene position: 398425-397103 (Counterclockwise)
Preceding gene: 134298252
Following gene: 134298250
Centisome position: 11.04
GC content: 30.39
Gene sequence:
>1323_bases TTGAATTTACAAGAGTATATAAATGTTGTCCATGATGGCAAACCAGATTGGTTTGTAAGTGAATGTAATAGTTATTACCA CCAAAGCAGAATCAATAATATTATTGACATAAAAGAATATTTGAGTGGTAGTCATTTAATCAATAATAGGCCAGCGGAAA TGTGGAACGGAAAAGTATTTGAACCCAGGAGAATAGTTTTACAGTATGCTAAGACAGTTTTAAATTTTAGTACAAGTTAT CTGTTAAAAAATCCCGTAACAATTACAGGTGAAGAAAATGACGTTAAAGTGATGAAGAAAGTTTATAAGCAAGGTAAATT CAATAGAACTGATTTAGATATAATGGACAAGTTAGTTAAATATGGGGCTATCTATGAATATATATTTGTTGATAAAGACG GAAAGATTAAGAGTAAATTGATTAATCCAGAGGATGCTTATCCTATCTATAATGAGCAGGGAGAAATGATTTGTTTTATA GAACATTATACAACTGATTATAATGTTAGTTACTACAATATCTTTACTGATAGTACAGTCCAAAAATGGTCTGATGCTGG AGGGGATTTTAATTTCTTAGGAGTTTTTAATAATCCTAGTGGGCTACCTTGTGTTTATAAGAATTTGAATGAGTTAGATA ATACAGATGGAAGATCAGATTTAGAGGATTTTATAAACATCATAGATAATATGGAGGATTTGATTAGTAAATATACTGAC AGTATTTACAAGTTTCTAAATCCTATTCCTGTAGTGATAGGACAGAGATTAAATATAAAAGATGGCAAAGGTGAGATACC AACAAACTTAGTTGGTGTTGGTCTTAATTTAGATGATGGAGCAGACATGAAATTTATTCATGGTCAATTGGATTTTGAAA GTTTTGAGAGCGTTTGGAAGGTATTAAAGCAATCATTGTTAGATATTAGTAATACTCCTGCTGTCAGTATGAATAATACA GATATTAGCAATTTATCAGAAGTAAGTATAAAATTATTGTTTTCCCTAGCAGATATTAAAGCAGGATTAAATGAGCGATA TATTAGAGAAGGATTTGAACAAAGGTTTAAAAAAATAGAGAAATTGTTGAGGTTGCAGGGTATAGAGATTAATTCAGATA ATATTGATGTTGTGTTCCAGTATGCAAGGCCACTAAATGAAACGGATATTATTGATAATATTAAGGTGCTGAAGGAATTA GGAGTAATGAGTTTACAGAGTGCAATTGAGAATTGTCCAATGATATACGATGTTGGAAGTGAAATGGAAAGATTAGGTAA AGAGAGGAATGGATTAGATAATACGGATATTGTAAATAGTTAA
Upstream 100 bases:
>100_bases TGGTATGTTTGACATTAAATTGTTTCACGTGAAACATATATTATAATTGACAACTTAATCATTTGTCAAGGTGTCAATTT TAGATAAGGAGGGGTTAACT
Downstream 100 bases:
>100_bases TTAGGATGGGTTGTTTTAATTGATAATGATTATTAATTAGAAGTATAGGGGATATGTGGGATGGGGATGCAGAACATTTG TTCGGTATTTTCGCCCATGT
Product: phage portal protein, SPP1
Products: NA
Alternate protein names: Phage Portal Protein SPP1 Family; Portal Protein; Phage Portal Protein
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MNLQEYINVVHDGKPDWFVSECNSYYHQSRINNIIDIKEYLSGSHLINNRPAEMWNGKVFEPRRIVLQYAKTVLNFSTSY LLKNPVTITGEENDVKVMKKVYKQGKFNRTDLDIMDKLVKYGAIYEYIFVDKDGKIKSKLINPEDAYPIYNEQGEMICFI EHYTTDYNVSYYNIFTDSTVQKWSDAGGDFNFLGVFNNPSGLPCVYKNLNELDNTDGRSDLEDFINIIDNMEDLISKYTD SIYKFLNPIPVVIGQRLNIKDGKGEIPTNLVGVGLNLDDGADMKFIHGQLDFESFESVWKVLKQSLLDISNTPAVSMNNT DISNLSEVSIKLLFSLADIKAGLNERYIREGFEQRFKKIEKLLRLQGIEINSDNIDVVFQYARPLNETDIIDNIKVLKEL GVMSLQSAIENCPMIYDVGSEMERLGKERNGLDNTDIVNS
Sequences:
>Translated_440_residues MNLQEYINVVHDGKPDWFVSECNSYYHQSRINNIIDIKEYLSGSHLINNRPAEMWNGKVFEPRRIVLQYAKTVLNFSTSY LLKNPVTITGEENDVKVMKKVYKQGKFNRTDLDIMDKLVKYGAIYEYIFVDKDGKIKSKLINPEDAYPIYNEQGEMICFI EHYTTDYNVSYYNIFTDSTVQKWSDAGGDFNFLGVFNNPSGLPCVYKNLNELDNTDGRSDLEDFINIIDNMEDLISKYTD SIYKFLNPIPVVIGQRLNIKDGKGEIPTNLVGVGLNLDDGADMKFIHGQLDFESFESVWKVLKQSLLDISNTPAVSMNNT DISNLSEVSIKLLFSLADIKAGLNERYIREGFEQRFKKIEKLLRLQGIEINSDNIDVVFQYARPLNETDIIDNIKVLKEL GVMSLQSAIENCPMIYDVGSEMERLGKERNGLDNTDIVNS >Mature_440_residues MNLQEYINVVHDGKPDWFVSECNSYYHQSRINNIIDIKEYLSGSHLINNRPAEMWNGKVFEPRRIVLQYAKTVLNFSTSY LLKNPVTITGEENDVKVMKKVYKQGKFNRTDLDIMDKLVKYGAIYEYIFVDKDGKIKSKLINPEDAYPIYNEQGEMICFI EHYTTDYNVSYYNIFTDSTVQKWSDAGGDFNFLGVFNNPSGLPCVYKNLNELDNTDGRSDLEDFINIIDNMEDLISKYTD SIYKFLNPIPVVIGQRLNIKDGKGEIPTNLVGVGLNLDDGADMKFIHGQLDFESFESVWKVLKQSLLDISNTPAVSMNNT DISNLSEVSIKLLFSLADIKAGLNERYIREGFEQRFKKIEKLLRLQGIEINSDNIDVVFQYARPLNETDIIDNIKVLKEL GVMSLQSAIENCPMIYDVGSEMERLGKERNGLDNTDIVNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50433; Mature: 50433
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLQEYINVVHDGKPDWFVSECNSYYHQSRINNIIDIKEYLSGSHLINNRPAEMWNGKVF CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC EPRRIVLQYAKTVLNFSTSYLLKNPVTITGEENDVKVMKKVYKQGKFNRTDLDIMDKLVK CHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH YGAIYEYIFVDKDGKIKSKLINPEDAYPIYNEQGEMICFIEHYTTDYNVSYYNIFTDSTV HCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCHH QKWSDAGGDFNFLGVFNNPSGLPCVYKNLNELDNTDGRSDLEDFINIIDNMEDLISKYTD HHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH SIYKFLNPIPVVIGQRLNIKDGKGEIPTNLVGVGLNLDDGADMKFIHGQLDFESFESVWK HHHHHHCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHH VLKQSLLDISNTPAVSMNNTDISNLSEVSIKLLFSLADIKAGLNERYIREGFEQRFKKIE HHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KLLRLQGIEINSDNIDVVFQYARPLNETDIIDNIKVLKELGVMSLQSAIENCPMIYDVGS HHHHHCCCEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCH EMERLGKERNGLDNTDIVNS HHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNLQEYINVVHDGKPDWFVSECNSYYHQSRINNIIDIKEYLSGSHLINNRPAEMWNGKVF CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC EPRRIVLQYAKTVLNFSTSYLLKNPVTITGEENDVKVMKKVYKQGKFNRTDLDIMDKLVK CHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH YGAIYEYIFVDKDGKIKSKLINPEDAYPIYNEQGEMICFIEHYTTDYNVSYYNIFTDSTV HCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCHH QKWSDAGGDFNFLGVFNNPSGLPCVYKNLNELDNTDGRSDLEDFINIIDNMEDLISKYTD HHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH SIYKFLNPIPVVIGQRLNIKDGKGEIPTNLVGVGLNLDDGADMKFIHGQLDFESFESVWK HHHHHHCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHH VLKQSLLDISNTPAVSMNNTDISNLSEVSIKLLFSLADIKAGLNERYIREGFEQRFKKIE HHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KLLRLQGIEINSDNIDVVFQYARPLNETDIIDNIKVLKELGVMSLQSAIENCPMIYDVGS HHHHHCCCEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCH EMERLGKERNGLDNTDIVNS HHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA