Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

Click here to switch to the map view.

The map label for this gene is 126697116

Identifier: 126697116

GI number: 126697116

Start: 1500099

End: 1501403

Strand: Reverse

Name: 126697116

Synonym: P9301_17781

Alternate gene names: NA

Gene position: 1501403-1500099 (Counterclockwise)

Preceding gene: 126697117

Following gene: 126697115

Centisome position: 91.44

GC content: 31.26

Gene sequence:

>1305_bases
TTGCAATCCTCTGCCTTACCACTTGGCCATGCCGCCGAAAAAGATTCGATTGAGTCTTTTTATGATCTTAACAGTAAGGT
GTCTCATTCTCTATTATTCATATGCAATGGTCATGGAGAAGATGTAATCGCATCGGAAATAATAAAAAGATTACTAAAAA
TTAAAAATAAAAATATTGAAGTTTTACCGTTAGTAGGAAATGGAGATGTATTTAATTCCATAAAATCAAAAAATTTTCGT
AAAATAGGATATTTAAAAGAGCTGCCTAGTGGAGGTTTTAGTAATCAAAGTTTGAAGGGATTTGTGCTTGATTTGTTTGC
AGGATTTTTAATCGATAATTTAAGAAATTTTCTACTTGTAAAACAGAAGTCAAAACATAACTGCCAAATTATTGCAGTAG
GCGATTTCTTACCGTTACTCTACGCTTGGAGTTCAGAATGCGACTTTAGTTTCATTGGAACTCCCAAAAGTGATCATACT
TGGAGTAGTGGGCCAGGTTGGGATTTAAGCGATTTTTATCATAAGTTGAAAGGTTCTGAATGGGATCCATGGGAAATGTT
TTTAATGAAATCTCCAAGATGTAAAAATTTAATTATGAGAGATAAAATTACAGCCAGTAATTTGTATAAAAAAAATATTG
ATGCAAAATACTTGGGTAATCCAATGATGGATTTTGTTAACGTAGCAAACGATAAGATATCAAATATTATTTCTTTTAAA
AGGATTATTTTATTAATTGGAAGTAGATACCCTGAAGCTCTCAAAAATCTTGATAATTTTCTAAATTGTTTGCAAGATTT
TGATTTATCAAAGGATTTGTTAATACTTTTGCCTTTGAGCATTAATGCGAATGTGATTCAAATTCAAAATTATTTAAATA
AATATGGTTTTAAAAAACAAAGTAAAGTTAAATTTCTTATTGAAGAAGATTCAGTATGGAAGAAGAAAGATAAATATGTA
GTAATTGGAAAAGGTAAATTCAATTCATGGGCTAATATGGCAGAAGTTGGCTTGTCTAATGCAGGAACTGCTACAGAGCA
AATTGCTGGCCTTGGAATTCCATCTCTTTCTCTACCGGGACCTGGACCACAATTTACAAAATCATTTGCAAAAAGGCAAT
CAAGATTATTGGGAGGTAGTGTTCTAGTTTGCAAGAACAAAAAAATTCTTTTAAAACGTTTAAGTTTACTTTTGAAAGGA
AAAGTTGATAGGTTAGAACAAGCAAAAATTGGAAAAAAAAGAATGGGGGAACCCGGAGCAAGTAAGAAAATCGTAGATGC
CATAAACCTTCATTTGTTATCTTAG

Upstream 100 bases:

>100_bases
TACCCTTTATTTGAAATTGAAGTTCTTAGAAAACTTCATAATTCAATGCGTAAAAAAATTAAATAAGGCGGCACCCAGAT
TCGAACTGGGGATAAAGGAT

Downstream 100 bases:

>100_bases
TAAATGGCACAAACTTATTTATTATTAATTCTTTTATGTATTCAATAAATGATCGGCAATATCTAAAAATTTGTGCAGAG
ATTGCAAAACTTATGAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MQSSALPLGHAAEKDSIESFYDLNSKVSHSLLFICNGHGEDVIASEIIKRLLKIKNKNIEVLPLVGNGDVFNSIKSKNFR
KIGYLKELPSGGFSNQSLKGFVLDLFAGFLIDNLRNFLLVKQKSKHNCQIIAVGDFLPLLYAWSSECDFSFIGTPKSDHT
WSSGPGWDLSDFYHKLKGSEWDPWEMFLMKSPRCKNLIMRDKITASNLYKKNIDAKYLGNPMMDFVNVANDKISNIISFK
RIILLIGSRYPEALKNLDNFLNCLQDFDLSKDLLILLPLSINANVIQIQNYLNKYGFKKQSKVKFLIEEDSVWKKKDKYV
VIGKGKFNSWANMAEVGLSNAGTATEQIAGLGIPSLSLPGPGPQFTKSFAKRQSRLLGGSVLVCKNKKILLKRLSLLLKG
KVDRLEQAKIGKKRMGEPGASKKIVDAINLHLLS

Sequences:

>Translated_434_residues
MQSSALPLGHAAEKDSIESFYDLNSKVSHSLLFICNGHGEDVIASEIIKRLLKIKNKNIEVLPLVGNGDVFNSIKSKNFR
KIGYLKELPSGGFSNQSLKGFVLDLFAGFLIDNLRNFLLVKQKSKHNCQIIAVGDFLPLLYAWSSECDFSFIGTPKSDHT
WSSGPGWDLSDFYHKLKGSEWDPWEMFLMKSPRCKNLIMRDKITASNLYKKNIDAKYLGNPMMDFVNVANDKISNIISFK
RIILLIGSRYPEALKNLDNFLNCLQDFDLSKDLLILLPLSINANVIQIQNYLNKYGFKKQSKVKFLIEEDSVWKKKDKYV
VIGKGKFNSWANMAEVGLSNAGTATEQIAGLGIPSLSLPGPGPQFTKSFAKRQSRLLGGSVLVCKNKKILLKRLSLLLKG
KVDRLEQAKIGKKRMGEPGASKKIVDAINLHLLS
>Mature_434_residues
MQSSALPLGHAAEKDSIESFYDLNSKVSHSLLFICNGHGEDVIASEIIKRLLKIKNKNIEVLPLVGNGDVFNSIKSKNFR
KIGYLKELPSGGFSNQSLKGFVLDLFAGFLIDNLRNFLLVKQKSKHNCQIIAVGDFLPLLYAWSSECDFSFIGTPKSDHT
WSSGPGWDLSDFYHKLKGSEWDPWEMFLMKSPRCKNLIMRDKITASNLYKKNIDAKYLGNPMMDFVNVANDKISNIISFK
RIILLIGSRYPEALKNLDNFLNCLQDFDLSKDLLILLPLSINANVIQIQNYLNKYGFKKQSKVKFLIEEDSVWKKKDKYV
VIGKGKFNSWANMAEVGLSNAGTATEQIAGLGIPSLSLPGPGPQFTKSFAKRQSRLLGGSVLVCKNKKILLKRLSLLLKG
KVDRLEQAKIGKKRMGEPGASKKIVDAINLHLLS

Specific function: Unknown

COG id: COG4370

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48609; Mature: 48609

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSSALPLGHAAEKDSIESFYDLNSKVSHSLLFICNGHGEDVIASEIIKRLLKIKNKNIE
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEE
VLPLVGNGDVFNSIKSKNFRKIGYLKELPSGGFSNQSLKGFVLDLFAGFLIDNLRNFLLV
EEEEECCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEE
KQKSKHNCQIIAVGDFLPLLYAWSSECDFSFIGTPKSDHTWSSGPGWDLSDFYHKLKGSE
ECCCCCCEEEEEECCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCC
WDPWEMFLMKSPRCKNLIMRDKITASNLYKKNIDAKYLGNPMMDFVNVANDKISNIISFK
CCHHHHHEECCCCHHCCHHHCCCCHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHH
RIILLIGSRYPEALKNLDNFLNCLQDFDLSKDLLILLPLSINANVIQIQNYLNKYGFKKQ
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCC
SKVKFLIEEDSVWKKKDKYVVIGKGKFNSWANMAEVGLSNAGTATEQIAGLGIPSLSLPG
CCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCC
PGPQFTKSFAKRQSRLLGGSVLVCKNKKILLKRLSLLLKGKVDRLEQAKIGKKRMGEPGA
CCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
SKKIVDAINLHLLS
CHHHHHHHHHEECC
>Mature Secondary Structure
MQSSALPLGHAAEKDSIESFYDLNSKVSHSLLFICNGHGEDVIASEIIKRLLKIKNKNIE
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEE
VLPLVGNGDVFNSIKSKNFRKIGYLKELPSGGFSNQSLKGFVLDLFAGFLIDNLRNFLLV
EEEEECCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEE
KQKSKHNCQIIAVGDFLPLLYAWSSECDFSFIGTPKSDHTWSSGPGWDLSDFYHKLKGSE
ECCCCCCEEEEEECCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCC
WDPWEMFLMKSPRCKNLIMRDKITASNLYKKNIDAKYLGNPMMDFVNVANDKISNIISFK
CCHHHHHEECCCCHHCCHHHCCCCHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHH
RIILLIGSRYPEALKNLDNFLNCLQDFDLSKDLLILLPLSINANVIQIQNYLNKYGFKKQ
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCC
SKVKFLIEEDSVWKKKDKYVVIGKGKFNSWANMAEVGLSNAGTATEQIAGLGIPSLSLPG
CCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCC
PGPQFTKSFAKRQSRLLGGSVLVCKNKKILLKRLSLLLKGKVDRLEQAKIGKKRMGEPGA
CCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
SKKIVDAINLHLLS
CHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA