| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126697116
Identifier: 126697116
GI number: 126697116
Start: 1500099
End: 1501403
Strand: Reverse
Name: 126697116
Synonym: P9301_17781
Alternate gene names: NA
Gene position: 1501403-1500099 (Counterclockwise)
Preceding gene: 126697117
Following gene: 126697115
Centisome position: 91.44
GC content: 31.26
Gene sequence:
>1305_bases TTGCAATCCTCTGCCTTACCACTTGGCCATGCCGCCGAAAAAGATTCGATTGAGTCTTTTTATGATCTTAACAGTAAGGT GTCTCATTCTCTATTATTCATATGCAATGGTCATGGAGAAGATGTAATCGCATCGGAAATAATAAAAAGATTACTAAAAA TTAAAAATAAAAATATTGAAGTTTTACCGTTAGTAGGAAATGGAGATGTATTTAATTCCATAAAATCAAAAAATTTTCGT AAAATAGGATATTTAAAAGAGCTGCCTAGTGGAGGTTTTAGTAATCAAAGTTTGAAGGGATTTGTGCTTGATTTGTTTGC AGGATTTTTAATCGATAATTTAAGAAATTTTCTACTTGTAAAACAGAAGTCAAAACATAACTGCCAAATTATTGCAGTAG GCGATTTCTTACCGTTACTCTACGCTTGGAGTTCAGAATGCGACTTTAGTTTCATTGGAACTCCCAAAAGTGATCATACT TGGAGTAGTGGGCCAGGTTGGGATTTAAGCGATTTTTATCATAAGTTGAAAGGTTCTGAATGGGATCCATGGGAAATGTT TTTAATGAAATCTCCAAGATGTAAAAATTTAATTATGAGAGATAAAATTACAGCCAGTAATTTGTATAAAAAAAATATTG ATGCAAAATACTTGGGTAATCCAATGATGGATTTTGTTAACGTAGCAAACGATAAGATATCAAATATTATTTCTTTTAAA AGGATTATTTTATTAATTGGAAGTAGATACCCTGAAGCTCTCAAAAATCTTGATAATTTTCTAAATTGTTTGCAAGATTT TGATTTATCAAAGGATTTGTTAATACTTTTGCCTTTGAGCATTAATGCGAATGTGATTCAAATTCAAAATTATTTAAATA AATATGGTTTTAAAAAACAAAGTAAAGTTAAATTTCTTATTGAAGAAGATTCAGTATGGAAGAAGAAAGATAAATATGTA GTAATTGGAAAAGGTAAATTCAATTCATGGGCTAATATGGCAGAAGTTGGCTTGTCTAATGCAGGAACTGCTACAGAGCA AATTGCTGGCCTTGGAATTCCATCTCTTTCTCTACCGGGACCTGGACCACAATTTACAAAATCATTTGCAAAAAGGCAAT CAAGATTATTGGGAGGTAGTGTTCTAGTTTGCAAGAACAAAAAAATTCTTTTAAAACGTTTAAGTTTACTTTTGAAAGGA AAAGTTGATAGGTTAGAACAAGCAAAAATTGGAAAAAAAAGAATGGGGGAACCCGGAGCAAGTAAGAAAATCGTAGATGC CATAAACCTTCATTTGTTATCTTAG
Upstream 100 bases:
>100_bases TACCCTTTATTTGAAATTGAAGTTCTTAGAAAACTTCATAATTCAATGCGTAAAAAAATTAAATAAGGCGGCACCCAGAT TCGAACTGGGGATAAAGGAT
Downstream 100 bases:
>100_bases TAAATGGCACAAACTTATTTATTATTAATTCTTTTATGTATTCAATAAATGATCGGCAATATCTAAAAATTTGTGCAGAG ATTGCAAAACTTATGAGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MQSSALPLGHAAEKDSIESFYDLNSKVSHSLLFICNGHGEDVIASEIIKRLLKIKNKNIEVLPLVGNGDVFNSIKSKNFR KIGYLKELPSGGFSNQSLKGFVLDLFAGFLIDNLRNFLLVKQKSKHNCQIIAVGDFLPLLYAWSSECDFSFIGTPKSDHT WSSGPGWDLSDFYHKLKGSEWDPWEMFLMKSPRCKNLIMRDKITASNLYKKNIDAKYLGNPMMDFVNVANDKISNIISFK RIILLIGSRYPEALKNLDNFLNCLQDFDLSKDLLILLPLSINANVIQIQNYLNKYGFKKQSKVKFLIEEDSVWKKKDKYV VIGKGKFNSWANMAEVGLSNAGTATEQIAGLGIPSLSLPGPGPQFTKSFAKRQSRLLGGSVLVCKNKKILLKRLSLLLKG KVDRLEQAKIGKKRMGEPGASKKIVDAINLHLLS
Sequences:
>Translated_434_residues MQSSALPLGHAAEKDSIESFYDLNSKVSHSLLFICNGHGEDVIASEIIKRLLKIKNKNIEVLPLVGNGDVFNSIKSKNFR KIGYLKELPSGGFSNQSLKGFVLDLFAGFLIDNLRNFLLVKQKSKHNCQIIAVGDFLPLLYAWSSECDFSFIGTPKSDHT WSSGPGWDLSDFYHKLKGSEWDPWEMFLMKSPRCKNLIMRDKITASNLYKKNIDAKYLGNPMMDFVNVANDKISNIISFK RIILLIGSRYPEALKNLDNFLNCLQDFDLSKDLLILLPLSINANVIQIQNYLNKYGFKKQSKVKFLIEEDSVWKKKDKYV VIGKGKFNSWANMAEVGLSNAGTATEQIAGLGIPSLSLPGPGPQFTKSFAKRQSRLLGGSVLVCKNKKILLKRLSLLLKG KVDRLEQAKIGKKRMGEPGASKKIVDAINLHLLS >Mature_434_residues MQSSALPLGHAAEKDSIESFYDLNSKVSHSLLFICNGHGEDVIASEIIKRLLKIKNKNIEVLPLVGNGDVFNSIKSKNFR KIGYLKELPSGGFSNQSLKGFVLDLFAGFLIDNLRNFLLVKQKSKHNCQIIAVGDFLPLLYAWSSECDFSFIGTPKSDHT WSSGPGWDLSDFYHKLKGSEWDPWEMFLMKSPRCKNLIMRDKITASNLYKKNIDAKYLGNPMMDFVNVANDKISNIISFK RIILLIGSRYPEALKNLDNFLNCLQDFDLSKDLLILLPLSINANVIQIQNYLNKYGFKKQSKVKFLIEEDSVWKKKDKYV VIGKGKFNSWANMAEVGLSNAGTATEQIAGLGIPSLSLPGPGPQFTKSFAKRQSRLLGGSVLVCKNKKILLKRLSLLLKG KVDRLEQAKIGKKRMGEPGASKKIVDAINLHLLS
Specific function: Unknown
COG id: COG4370
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48609; Mature: 48609
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSSALPLGHAAEKDSIESFYDLNSKVSHSLLFICNGHGEDVIASEIIKRLLKIKNKNIE CCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEE VLPLVGNGDVFNSIKSKNFRKIGYLKELPSGGFSNQSLKGFVLDLFAGFLIDNLRNFLLV EEEEECCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEE KQKSKHNCQIIAVGDFLPLLYAWSSECDFSFIGTPKSDHTWSSGPGWDLSDFYHKLKGSE ECCCCCCEEEEEECCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCC WDPWEMFLMKSPRCKNLIMRDKITASNLYKKNIDAKYLGNPMMDFVNVANDKISNIISFK CCHHHHHEECCCCHHCCHHHCCCCHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHH RIILLIGSRYPEALKNLDNFLNCLQDFDLSKDLLILLPLSINANVIQIQNYLNKYGFKKQ HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCC SKVKFLIEEDSVWKKKDKYVVIGKGKFNSWANMAEVGLSNAGTATEQIAGLGIPSLSLPG CCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCC PGPQFTKSFAKRQSRLLGGSVLVCKNKKILLKRLSLLLKGKVDRLEQAKIGKKRMGEPGA CCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC SKKIVDAINLHLLS CHHHHHHHHHEECC >Mature Secondary Structure MQSSALPLGHAAEKDSIESFYDLNSKVSHSLLFICNGHGEDVIASEIIKRLLKIKNKNIE CCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEE VLPLVGNGDVFNSIKSKNFRKIGYLKELPSGGFSNQSLKGFVLDLFAGFLIDNLRNFLLV EEEEECCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEE KQKSKHNCQIIAVGDFLPLLYAWSSECDFSFIGTPKSDHTWSSGPGWDLSDFYHKLKGSE ECCCCCCEEEEEECCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCC WDPWEMFLMKSPRCKNLIMRDKITASNLYKKNIDAKYLGNPMMDFVNVANDKISNIISFK CCHHHHHEECCCCHHCCHHHCCCCHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHH RIILLIGSRYPEALKNLDNFLNCLQDFDLSKDLLILLPLSINANVIQIQNYLNKYGFKKQ HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCC SKVKFLIEEDSVWKKKDKYVVIGKGKFNSWANMAEVGLSNAGTATEQIAGLGIPSLSLPG CCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCC PGPQFTKSFAKRQSRLLGGSVLVCKNKKILLKRLSLLLKGKVDRLEQAKIGKKRMGEPGA CCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC SKKIVDAINLHLLS CHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA