Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

Click here to switch to the map view.

The map label for this gene is 126697115

Identifier: 126697115

GI number: 126697115

Start: 1499797

End: 1500063

Strand: Reverse

Name: 126697115

Synonym: P9301_17771

Alternate gene names: NA

Gene position: 1500063-1499797 (Counterclockwise)

Preceding gene: 126697116

Following gene: 126697112

Centisome position: 91.36

GC content: 27.34

Gene sequence:

>267_bases
ATGTATTCAATAAATGATCGGCAATATCTAAAAATTTGTGCAGAGATTGCAAAACTTATGAGTATAAGCTTATCTTCTGC
AAAAAAGAAAGTAGAAATTCAAATTGCAAAAGAAGGCTCGAAAACTATTCAAGAAAAAATACAAGTTGCGCAAAATGTTT
TAAAAATTTGTGAAAAAAATGATGGAGATAAATTAAGTTCTTCAAGAATACTTGATAAGCTTATGGAAACTCTTGATGGT
GAAGATAATTTTTTAACTGAAGATTGA

Upstream 100 bases:

>100_bases
GAATGGGGGAACCCGGAGCAAGTAAGAAAATCGTAGATGCCATAAACCTTCATTTGTTATCTTAGTAAATGGCACAAACT
TATTTATTATTAATTCTTTT

Downstream 100 bases:

>100_bases
TTCTTAATGTTCAAATATATTTGAGAATTTTAGTATGTCTAAATCAGCATGTACAGAAACTGTTTCGAAACATTTTTGAG
CTAATTCATATCTATCCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MYSINDRQYLKICAEIAKLMSISLSSAKKKVEIQIAKEGSKTIQEKIQVAQNVLKICEKNDGDKLSSSRILDKLMETLDG
EDNFLTED

Sequences:

>Translated_88_residues
MYSINDRQYLKICAEIAKLMSISLSSAKKKVEIQIAKEGSKTIQEKIQVAQNVLKICEKNDGDKLSSSRILDKLMETLDG
EDNFLTED
>Mature_88_residues
MYSINDRQYLKICAEIAKLMSISLSSAKKKVEIQIAKEGSKTIQEKIQVAQNVLKICEKNDGDKLSSSRILDKLMETLDG
EDNFLTED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9939; Mature: 9939

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSINDRQYLKICAEIAKLMSISLSSAKKKVEIQIAKEGSKTIQEKIQVAQNVLKICEKN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHCCC
DGDKLSSSRILDKLMETLDGEDNFLTED
CCCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MYSINDRQYLKICAEIAKLMSISLSSAKKKVEIQIAKEGSKTIQEKIQVAQNVLKICEKN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHCCC
DGDKLSSSRILDKLMETLDGEDNFLTED
CCCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA