| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is groES
Identifier: 126696965
GI number: 126696965
Start: 1361285
End: 1361596
Strand: Reverse
Name: groES
Synonym: P9301_16271
Alternate gene names: 126696965
Gene position: 1361596-1361285 (Counterclockwise)
Preceding gene: 126696968
Following gene: 126696964
Centisome position: 82.93
GC content: 40.71
Gene sequence:
>312_bases ATGGCAGCTGTTTCACTTACAGTCTCTACAGTAAAACCACTGGGAGATAGAATATTTATTAAAGTTTCCGCATCTGAGGA AAAAACTGCTGGGGGCATTCTTTTGCCTGATTCAGCTAAAGAAAAACCACAGGTTGGAGAGGTTGCTCAGGTTGGTCCTG GCAAACTTAATGACGATGGTTCTCGACAAACTCCAGAAGTGAGTATTGGCGATAAAGTTTTGTACAGCAAATATGCTGGC ACAGACATCAAATTGGGAGGAGATGAATATGTCTTACTCTCAGAAAAGGATATTTTAGCTGTAGTAAGCTAA
Upstream 100 bases:
>100_bases ATTGCCGCTCTGCAGATTATGTTGTTGATGATACGGATAGAGAATTTCTCTTTCTATTTTTATGACGCAAAGCGTCTCAA TCATGATCCTCCATTAATTT
Downstream 100 bases:
>100_bases AGTATTTTTTTAAAAATTATTAAAACTTATTACTAAATTACTGCCTAAACATGGCTAAAAGAATTATTTACAATGAGCAA GCTCGTAGAGCGCTCGAGAG
Product: co-chaperonin GroES
Products: NA
Alternate protein names: GroES protein; Protein Cpn10
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MAAVSLTVSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAG TDIKLGGDEYVLLSEKDILAVVS
Sequences:
>Translated_103_residues MAAVSLTVSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAG TDIKLGGDEYVLLSEKDILAVVS >Mature_102_residues AAVSLTVSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGT DIKLGGDEYVLLSEKDILAVVS
Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
COG id: COG0234
COG function: function code O; Co-chaperonin GroES (HSP10)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GroES chaperonin family
Homologues:
Organism=Escherichia coli, GI1790585, Length=94, Percent_Identity=38.2978723404255, Blast_Score=65, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17555568, Length=99, Percent_Identity=36.3636363636364, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324594, Length=104, Percent_Identity=35.5769230769231, Blast_Score=73, Evalue=6e-15, Organism=Drosophila melanogaster, GI21358317, Length=99, Percent_Identity=42.4242424242424, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): CH10_PROM0 (A3PES5)
Other databases:
- EMBL: CP000576 - RefSeq: YP_001091851.1 - ProteinModelPortal: A3PES5 - SMR: A3PES5 - STRING: A3PES5 - GeneID: 4911392 - GenomeReviews: CP000576_GR - KEGG: pmg:P9301_16271 - eggNOG: COG0234 - HOGENOM: HBG703377 - OMA: VEYMVLE - ProtClustDB: PRK00364 - BioCyc: PMAR167546:P9301ORF_1659-MONOMER - GO: GO:0005737 - HAMAP: MF_00580 - InterPro: IPR020818 - InterPro: IPR018369 - InterPro: IPR011032 - Gene3D: G3DSA:2.30.33.40 - PANTHER: PTHR10772 - PRINTS: PR00297 - SMART: SM00883
Pfam domain/function: PF00166 Cpn10; SSF50129 GroES_like
EC number: NA
Molecular weight: Translated: 10761; Mature: 10630
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS00681 CHAPERONINS_CPN10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVSLTVSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDG CCEEEEEEECCCCCCCEEEEEEECCCCCCCCCEECCCCCCCCCCCCCEECCCCCCCCCCC SRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVVS CCCCCCEECCCEEEEEECCCCEEEECCCCEEEEECCCEEEEEC >Mature Secondary Structure AAVSLTVSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDG CEEEEEEECCCCCCCEEEEEEECCCCCCCCCEECCCCCCCCCCCCCEECCCCCCCCCCC SRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVVS CCCCCCEECCCEEEEEECCCCEEEECCCCEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA