| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696956
Identifier: 126696956
GI number: 126696956
Start: 1353670
End: 1354128
Strand: Direct
Name: 126696956
Synonym: P9301_16181
Alternate gene names: NA
Gene position: 1353670-1354128 (Clockwise)
Preceding gene: 126696955
Following gene: 126696960
Centisome position: 82.45
GC content: 29.41
Gene sequence:
>459_bases ATGACTGAACCTAATTACTGGCTAATGAAAAGTGAGCCTGATGCTTACAGCATAGATACTTTAAAAAATGACGGTGTAAC TTTATGGGATGGAATAAGAAATTATCAGGCTCGAAATTTTATGAGAAAAATGAATAAAGGAGATAAAGTGTTTTTCTATC ATTCGAATTGTAAACCCCCAGGTATTGTGGGACTTATGGAGGTAATAGATCTAAATATTGTTGATCCTACTCAATTTGAT CAAGATTCAAAATATTTTGATCCAAAATCGAAACCTGATAATCCGAGGTGGGATTGTGTAAAAGTAGAATATAAATTTAA ATCAGATAAGATTTTAAGTTTACCTGAATTAAAGATTTTATTTAATGAGGATGAGTTATTAGTCGTAAAAAAAGGAAATA GGTTATCTATATTACCTGTCAGAAATGATACTGCAAAAATACTACTAGAAAAAATATAA
Upstream 100 bases:
>100_bases CTAAACAAAACGCTTTGGATTTAGCTGACTTTCTAAAAAAGTTAACAAAATGCCATACCAGCACCATACCAGCAGCCCTA ATTCCCGCAAATTATAGACT
Downstream 100 bases:
>100_bases AAAATTTTTAATCCTTAAAATTCATTGAAAACATATTGCCAATATAAAGTCTCGTTAAATCCCTATTTTGAAATCCTTTT TGCATCAAAAATCCAGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MTEPNYWLMKSEPDAYSIDTLKNDGVTLWDGIRNYQARNFMRKMNKGDKVFFYHSNCKPPGIVGLMEVIDLNIVDPTQFD QDSKYFDPKSKPDNPRWDCVKVEYKFKSDKILSLPELKILFNEDELLVVKKGNRLSILPVRNDTAKILLEKI
Sequences:
>Translated_152_residues MTEPNYWLMKSEPDAYSIDTLKNDGVTLWDGIRNYQARNFMRKMNKGDKVFFYHSNCKPPGIVGLMEVIDLNIVDPTQFD QDSKYFDPKSKPDNPRWDCVKVEYKFKSDKILSLPELKILFNEDELLVVKKGNRLSILPVRNDTAKILLEKI >Mature_151_residues TEPNYWLMKSEPDAYSIDTLKNDGVTLWDGIRNYQARNFMRKMNKGDKVFFYHSNCKPPGIVGLMEVIDLNIVDPTQFDQ DSKYFDPKSKPDNPRWDCVKVEYKFKSDKILSLPELKILFNEDELLVVKKGNRLSILPVRNDTAKILLEKI
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI83267861, Length=163, Percent_Identity=39.8773006134969, Blast_Score=126, Evalue=8e-30, Organism=Homo sapiens, GI40806221, Length=163, Percent_Identity=39.8773006134969, Blast_Score=126, Evalue=8e-30, Organism=Homo sapiens, GI7661804, Length=163, Percent_Identity=39.8773006134969, Blast_Score=126, Evalue=8e-30, Organism=Homo sapiens, GI83267859, Length=105, Percent_Identity=49.5238095238095, Blast_Score=116, Evalue=6e-27, Organism=Homo sapiens, GI40806219, Length=105, Percent_Identity=49.5238095238095, Blast_Score=116, Evalue=6e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17778; Mature: 17647
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPNYWLMKSEPDAYSIDTLKNDGVTLWDGIRNYQARNFMRKMNKGDKVFFYHSNCKPP CCCCCEEEEECCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC GIVGLMEVIDLNIVDPTQFDQDSKYFDPKSKPDNPRWDCVKVEYKFKSDKILSLPELKIL CCEEEEHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEECCCCEEEE FNEDELLVVKKGNRLSILPVRNDTAKILLEKI ECCCCEEEEECCCEEEEEEECCCHHHHEEECC >Mature Secondary Structure TEPNYWLMKSEPDAYSIDTLKNDGVTLWDGIRNYQARNFMRKMNKGDKVFFYHSNCKPP CCCCEEEEECCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC GIVGLMEVIDLNIVDPTQFDQDSKYFDPKSKPDNPRWDCVKVEYKFKSDKILSLPELKIL CCEEEEHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEECCCCEEEE FNEDELLVVKKGNRLSILPVRNDTAKILLEKI ECCCCEEEEECCCEEEEEEECCCHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA