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The map label for this gene is fdx4 [H]

Identifier: 126696671

GI number: 126696671

Start: 1114821

End: 1115171

Strand: Direct

Name: fdx4 [H]

Synonym: P9301_13331

Alternate gene names: 126696671

Gene position: 1114821-1115171 (Clockwise)

Preceding gene: 126696669

Following gene: 126696676

Centisome position: 67.9

GC content: 32.48

Gene sequence:

>351_bases
ATGACAAAAGGGGTTCATAAACACCTTCTACTATGCGCAACGCCCACAAAACAGAAATGCTTTAAAGGCAATGAAGGTCA
AAAAGCATGGGAATGTATGAAAAAGACTTTAAAAAAATTTGAGAATGATCCCTCTACAAAAAACGTTCATATATTAAGAT
CAAAAGCTGACTGTTTAAGGGTATGTAAGAACGGCCCAATTCTTCTTATTTGGCCTGATGGCATTTGGTATGAGAAAATC
TCTCCAGAAAAAATTTCTGAAATTTTTACCTCACATATTATTAATGGTAAGCCAATAGAAAAATGGATTTTCAAAAAAAC
ACCATTTTTAAATAGTCCTAGATACTCATAA

Upstream 100 bases:

>100_bases
ACATTGTAGTTTCTTCACCTTTTAGTGAAGAAGTTTTTTGCAGTAGCTCATAACATTGCCTAGAATCATTCAAAAAGCAT
TAAGGGAAGGTTTTTTAAAA

Downstream 100 bases:

>100_bases
ACCAGTTCTTTACGACTTCGTCTGACCAGCAGCCATTAATCGAATGAAAACCATTATGACCTCCTTTTTCAGTTATAAAA
ATAGTGAATTTATCAATAGA

Product: ferredoxin

Products: NA

Alternate protein names: AaFd4 [H]

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MTKGVHKHLLLCATPTKQKCFKGNEGQKAWECMKKTLKKFENDPSTKNVHILRSKADCLRVCKNGPILLIWPDGIWYEKI
SPEKISEIFTSHIINGKPIEKWIFKKTPFLNSPRYS

Sequences:

>Translated_116_residues
MTKGVHKHLLLCATPTKQKCFKGNEGQKAWECMKKTLKKFENDPSTKNVHILRSKADCLRVCKNGPILLIWPDGIWYEKI
SPEKISEIFTSHIINGKPIEKWIFKKTPFLNSPRYS
>Mature_115_residues
TKGVHKHLLLCATPTKQKCFKGNEGQKAWECMKKTLKKFENDPSTKNVHILRSKADCLRVCKNGPILLIWPDGIWYEKIS
PEKISEIFTSHIINGKPIEKWIFKKTPFLNSPRYS

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG3411

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 2Fe2S Shethna-type ferredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002023
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01257 Complex1_24kDa [H]

EC number: NA

Molecular weight: Translated: 13456; Mature: 13325

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKGVHKHLLLCATPTKQKCFKGNEGQKAWECMKKTLKKFENDPSTKNVHILRSKADCLR
CCCCCCCEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHH
VCKNGPILLIWPDGIWYEKISPEKISEIFTSHIINGKPIEKWIFKKTPFLNSPRYS
HHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TKGVHKHLLLCATPTKQKCFKGNEGQKAWECMKKTLKKFENDPSTKNVHILRSKADCLR
CCCCCCEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHH
VCKNGPILLIWPDGIWYEKISPEKISEIFTSHIINGKPIEKWIFKKTPFLNSPRYS
HHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320; 10441520; 10884354; 12089152 [H]