| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
Click here to switch to the map view.
The map label for this gene is cdsA [H]
Identifier: 126696530
GI number: 126696530
Start: 1005534
End: 1006391
Strand: Direct
Name: cdsA [H]
Synonym: P9301_11921
Alternate gene names: 126696530
Gene position: 1005534-1006391 (Clockwise)
Preceding gene: 126696529
Following gene: 126696535
Centisome position: 61.24
GC content: 30.77
Gene sequence:
>858_bases ATGAGATTTAAAAGCGGATTACTAATAGGAATTTTTGGTTTAATTGTTGTTTTGTTGGGGGGATGGTTTTTTACCTTGGC AACTGCGTTGCTTACATATTTAGCATTATTAGAATTTTTTAGAATGGCAGAATTTAAAGGAATAAGACCAGCTACAAAAA CCACATTATTTTCGTCGTTTATTATTATAGTTTCTACTTATCTTGAGACCATTGGTGTGCTTGAAGGAGAAATTTCAAAT TCAATTTTGCCAATCTGTTCAGTTGGGATATGCACTTGGTTACTTTTGCAACCAAAATCTGGGACAATTTCAGATATTGC AGCATCTATTTTTGGATTATTCTATTTAGGTTTTTTACCTAGTTACTGGATTAAGTTGAGGGGATTAGATTCAGTGATAA TAAGTTCAAATCAGAGTATTATGTCGTTTGAGAACTTATCAAATACCACAGGTCTTCATTTAACTTTAACTTCTTGTTTT TTAATTGTAGCTAGTGATATTGGTTCTTATTTCATTGGGAAGTCATTTGGTAAAACATCTCTATCTCCAATATCTCCGAG CAAAACTATAGAAGGTTTAATTGGAGGAATATCCTGTTCAATTTTACTAGCAATATTTTTCGCATTTTTAATGAATTGGG AAAATCCATTAATTGTTGGAATAATTTATGGAATTTCAATTTCTCTTATGGCATTAGTTGGAGATTTAATAGAATCTATG ATGAAGAGAGATGCAAAAATAAAAGATTCCGGAACTTTTTTACCGGGACATGGAGGGATTCTTGACAGAATTGACAGTTA CATCTTTACTCCATCTGTTTTGTATTACTTTTTTATAATTCTCAAATATCTAAATTAA
Upstream 100 bases:
>100_bases AGTGGACATAGATAGGTTTAATTGGATAAATAATCAAAGTTTATGCAACAAAGATCTGGTAAATTTTAATATAAAGGTCT TAGAAACATAGCAATTTCAT
Downstream 100 bases:
>100_bases TTAAGAAAAATTTTATTCCAAAAAATAATCTTTGATAATTTTGCTAGATAATGATGGAAGATCTATATGTGGAAGATGAC CACAATTTTGTAACCCTACA
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MRFKSGLLIGIFGLIVVLLGGWFFTLATALLTYLALLEFFRMAEFKGIRPATKTTLFSSFIIIVSTYLETIGVLEGEISN SILPICSVGICTWLLLQPKSGTISDIAASIFGLFYLGFLPSYWIKLRGLDSVIISSNQSIMSFENLSNTTGLHLTLTSCF LIVASDIGSYFIGKSFGKTSLSPISPSKTIEGLIGGISCSILLAIFFAFLMNWENPLIVGIIYGISISLMALVGDLIESM MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVLYYFFIILKYLN
Sequences:
>Translated_285_residues MRFKSGLLIGIFGLIVVLLGGWFFTLATALLTYLALLEFFRMAEFKGIRPATKTTLFSSFIIIVSTYLETIGVLEGEISN SILPICSVGICTWLLLQPKSGTISDIAASIFGLFYLGFLPSYWIKLRGLDSVIISSNQSIMSFENLSNTTGLHLTLTSCF LIVASDIGSYFIGKSFGKTSLSPISPSKTIEGLIGGISCSILLAIFFAFLMNWENPLIVGIIYGISISLMALVGDLIESM MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVLYYFFIILKYLN >Mature_285_residues MRFKSGLLIGIFGLIVVLLGGWFFTLATALLTYLALLEFFRMAEFKGIRPATKTTLFSSFIIIVSTYLETIGVLEGEISN SILPICSVGICTWLLLQPKSGTISDIAASIFGLFYLGFLPSYWIKLRGLDSVIISSNQSIMSFENLSNTTGLHLTLTSCF LIVASDIGSYFIGKSFGKTSLSPISPSKTIEGLIGGISCSILLAIFFAFLMNWENPLIVGIIYGISISLMALVGDLIESM MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVLYYFFIILKYLN
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=107, Percent_Identity=45.7943925233645, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1787677, Length=118, Percent_Identity=44.0677966101695, Blast_Score=96, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 31230; Mature: 31230
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFKSGLLIGIFGLIVVLLGGWFFTLATALLTYLALLEFFRMAEFKGIRPATKTTLFSSF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IIIVSTYLETIGVLEGEISNSILPICSVGICTWLLLQPKSGTISDIAASIFGLFYLGFLP HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH SYWIKLRGLDSVIISSNQSIMSFENLSNTTGLHLTLTSCFLIVASDIGSYFIGKSFGKTS HHHHHHCCCCHHEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LSPISPSKTIEGLIGGISCSILLAIFFAFLMNWENPLIVGIIYGISISLMALVGDLIESM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHH MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVLYYFFIILKYLN HHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure MRFKSGLLIGIFGLIVVLLGGWFFTLATALLTYLALLEFFRMAEFKGIRPATKTTLFSSF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IIIVSTYLETIGVLEGEISNSILPICSVGICTWLLLQPKSGTISDIAASIFGLFYLGFLP HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH SYWIKLRGLDSVIISSNQSIMSFENLSNTTGLHLTLTSCFLIVASDIGSYFIGKSFGKTS HHHHHHCCCCHHEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LSPISPSKTIEGLIGGISCSILLAIFFAFLMNWENPLIVGIIYGISISLMALVGDLIESM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHH MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVLYYFFIILKYLN HHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]