Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

Click here to switch to the map view.

The map label for this gene is yuiD [H]

Identifier: 126696515

GI number: 126696515

Start: 990097

End: 990450

Strand: Direct

Name: yuiD [H]

Synonym: P9301_11771

Alternate gene names: 126696515

Gene position: 990097-990450 (Clockwise)

Preceding gene: 126696514

Following gene: 126696517

Centisome position: 60.3

GC content: 33.9

Gene sequence:

>354_bases
ATGTTCGAGACTGGTGGTATGCCTTCAAGCCATTCGGCCTTAATAACTGGTGCTGCATCTGGTGTAGGTTATGAATTGGG
ATTTGATAGCTCAATATTTGCATTATCAGTTGCTGTAGCACTAATAGTTATGTATGACGCTAGTGGTGTTCGAAAATCAG
CTGGTATTCAAGCTGTAGAAATCAATAAACTATCAAAAAAACTAGACCCTAAATCTGAATTACTTTTAAAAGAAAACTTG
GGCCATACAAAAATTGAAGTCATAGTGGGAAGTTTTTTAGGACCATTAATTACTTTGCCTGGTATGTTTTTTTTAGGTTC
ACCTCTAAAAATATTTGATTTGATAATAAATTAA

Upstream 100 bases:

>100_bases
TAATTCAGTTCTTTTCTGGAGCTTATTATCATGTTTACTAGCTCAATTTTTTAAAATTGTATTCAATTTCTTTTCAACTG
GAAAGATCAGGTTTGGAATA

Downstream 100 bases:

>100_bases
GAACCCTTTTAAAAACTAATTTGGGTTGCATCTATAAAGTTTTTTGCGACTTTTGGAGAACTTGGCAAATGTAAGTGAAT
CCAACTTGCATGCAATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MFETGGMPSSHSALITGAASGVGYELGFDSSIFALSVAVALIVMYDASGVRKSAGIQAVEINKLSKKLDPKSELLLKENL
GHTKIEVIVGSFLGPLITLPGMFFLGSPLKIFDLIIN

Sequences:

>Translated_117_residues
MFETGGMPSSHSALITGAASGVGYELGFDSSIFALSVAVALIVMYDASGVRKSAGIQAVEINKLSKKLDPKSELLLKENL
GHTKIEVIVGSFLGPLITLPGMFFLGSPLKIFDLIIN
>Mature_117_residues
MFETGGMPSSHSALITGAASGVGYELGFDSSIFALSVAVALIVMYDASGVRKSAGIQAVEINKLSKKLDPKSELLLKENL
GHTKIEVIVGSFLGPLITLPGMFFLGSPLKIFDLIIN

Specific function: Unknown

COG id: COG1963

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003832 [H]

Pfam domain/function: PF02681 DUF212 [H]

EC number: NA

Molecular weight: Translated: 12313; Mature: 12313

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFETGGMPSSHSALITGAASGVGYELGFDSSIFALSVAVALIVMYDASGVRKSAGIQAVE
CCCCCCCCCCCCEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCEEEE
INKLSKKLDPKSELLLKENLGHTKIEVIVGSFLGPLITLPGMFFLGSPLKIFDLIIN
HHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHCC
>Mature Secondary Structure
MFETGGMPSSHSALITGAASGVGYELGFDSSIFALSVAVALIVMYDASGVRKSAGIQAVE
CCCCCCCCCCCCEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCEEEE
INKLSKKLDPKSELLLKENLGHTKIEVIVGSFLGPLITLPGMFFLGSPLKIFDLIIN
HHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]