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The map label for this gene is lraI [H]

Identifier: 126696472

GI number: 126696472

Start: 952569

End: 954110

Strand: Direct

Name: lraI [H]

Synonym: P9301_11341

Alternate gene names: 126696472

Gene position: 952569-954110 (Clockwise)

Preceding gene: 126696470

Following gene: 126696473

Centisome position: 58.02

GC content: 34.89

Gene sequence:

>1542_bases
ATGTCAATTTTTAAAAGACTTTTAACAAATAAAAAAGGTGCGAGTAAGTCAATTATTAAAAATTCCGTAATCGCAGGAAC
AATTATATTTTCTGGTTTTGGGCAGGATGTTATGGCTAAAGGAAAGTCATATGTAGCAGTAGAACCACTAGTTTGTGATT
TAGTTAAATCAATTGCATTACCGTCTGACGAAGTTACATGCTTAGTAGATAGAAAACAAGATGTTCATGACTTAAAGATC
AATCCAAGGCAAGCTAAATTACTAAATAGCGCAGACAAAGTATTTACTCTTGGTAGAGAAATGACGCCAAGTATGAGAAA
TTGGGAAAATAAAAAGAATACTGTTGTTGTAGGTGTTAGTGCAATAGACGTAGATGATCATTCTGATCATGGAGGTCATG
ATGATCACTCAGACCATGGTGGACATGACGATCATTCTAAACATTCCGCTAAAGTAGATGATCATTCTGATCATGGAGGT
CATGATGATCACTCAGACCATGGTGGACATGATGATCATGCTGAAGGTGCTTTCGAATGGGCAGGCAAATTTCAACTTTC
TAAGGGTTCTTACAAATGGTCATTTGAAAAAGTAGATGGCGAATATGCAGATCCTGCAATGAAGATGGTGATTCTCAAAT
CTAATGACATAGAAGGGTCTGAAGATTTAGCTAAAGAATTATTAGGATCTAAAGACTCAATAAGCAGAAAAAATGATGGT
ACTTTGATAGCAAGTAATAAAGCTTTTGTTCTTAACTTTGATCAAAAAAAAGAAAGTACTGTTTTTAACGTGGATATCAA
AGAAGATGGTCAATATATATTTTTTACTGAACACATGCCTTTTGAGTTTGAAGCAACTCAACACTTTTTTAAAGACGTTT
CAAATAGTGATGTAGAACCAATAGCACAAGTTCCAGACGAAGGTGAGGGGCATCATCATCATGACCATGGAGGTCTAGAT
CCACATGTATGGCATGATCCGCATAACATCATAAAAATGGGAGATCTTATAAGCAAAAGTTTAAAGAAAGATATTTCAGT
TTTTAATAGAGGTGACAGAAAACTAATTAATGAAAGATTCGAAAAAGCTGATTCTCTCTTAGAAGACTTAGATAGTTGGA
TCGTCGAACAAGTAAGTTCTATTCCTGAGGAAAACAGAGTAATTGTCTCTAAACACAAAGCAATGGAATACTACGGGGAT
GCATTTGGTTTTGAAACCATTAGTTTACTTGACTTTCTTGGAGACTCCTCAAGCTTAAGGCCAGACAACATAAGTTCTAC
TTTAAAAATGTTAGATGAAGAGAAAGTTCAGGCAATATTTCCTGAACAAATTCCAGCATCTAAGTTATTAAGGAACTTAA
GTAGACAAAGTTCAGTTCCTTTAGCTTCTAATCAAATATTCGTTGATGGATTGATGATGGATGGTAATACGGTTTCAGTA
GCTGTTCACAATACTTGTACAATTGTTGATTCATTAGGTGGAAGCTGTGATAAAGAATCTGGCTCCAATCTTGAGTCTGA
ATGGTACAAACTTTCAGATTAA

Upstream 100 bases:

>100_bases
CCAATAATACAAGTTGCGTATTATTTTCATAACATTTGATACCTTCACTTGTCAGAGATAATGAAAATGATTATCATTTT
TAAGTATTTAATTATTTTTC

Downstream 100 bases:

>100_bases
ATTTTTCTAATAAAAACGGTTTTCATTTCTTATTATTACTATTATTAAACTATTATTTATTTAGTAAAAATCAATAAATG
AGCATCAAAGATAAAGTTCC

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 512

Protein sequence:

>513_residues
MSIFKRLLTNKKGASKSIIKNSVIAGTIIFSGFGQDVMAKGKSYVAVEPLVCDLVKSIALPSDEVTCLVDRKQDVHDLKI
NPRQAKLLNSADKVFTLGREMTPSMRNWENKKNTVVVGVSAIDVDDHSDHGGHDDHSDHGGHDDHSKHSAKVDDHSDHGG
HDDHSDHGGHDDHAEGAFEWAGKFQLSKGSYKWSFEKVDGEYADPAMKMVILKSNDIEGSEDLAKELLGSKDSISRKNDG
TLIASNKAFVLNFDQKKESTVFNVDIKEDGQYIFFTEHMPFEFEATQHFFKDVSNSDVEPIAQVPDEGEGHHHHDHGGLD
PHVWHDPHNIIKMGDLISKSLKKDISVFNRGDRKLINERFEKADSLLEDLDSWIVEQVSSIPEENRVIVSKHKAMEYYGD
AFGFETISLLDFLGDSSSLRPDNISSTLKMLDEEKVQAIFPEQIPASKLLRNLSRQSSVPLASNQIFVDGLMMDGNTVSV
AVHNTCTIVDSLGGSCDKESGSNLESEWYKLSD

Sequences:

>Translated_513_residues
MSIFKRLLTNKKGASKSIIKNSVIAGTIIFSGFGQDVMAKGKSYVAVEPLVCDLVKSIALPSDEVTCLVDRKQDVHDLKI
NPRQAKLLNSADKVFTLGREMTPSMRNWENKKNTVVVGVSAIDVDDHSDHGGHDDHSDHGGHDDHSKHSAKVDDHSDHGG
HDDHSDHGGHDDHAEGAFEWAGKFQLSKGSYKWSFEKVDGEYADPAMKMVILKSNDIEGSEDLAKELLGSKDSISRKNDG
TLIASNKAFVLNFDQKKESTVFNVDIKEDGQYIFFTEHMPFEFEATQHFFKDVSNSDVEPIAQVPDEGEGHHHHDHGGLD
PHVWHDPHNIIKMGDLISKSLKKDISVFNRGDRKLINERFEKADSLLEDLDSWIVEQVSSIPEENRVIVSKHKAMEYYGD
AFGFETISLLDFLGDSSSLRPDNISSTLKMLDEEKVQAIFPEQIPASKLLRNLSRQSSVPLASNQIFVDGLMMDGNTVSV
AVHNTCTIVDSLGGSCDKESGSNLESEWYKLSD
>Mature_512_residues
SIFKRLLTNKKGASKSIIKNSVIAGTIIFSGFGQDVMAKGKSYVAVEPLVCDLVKSIALPSDEVTCLVDRKQDVHDLKIN
PRQAKLLNSADKVFTLGREMTPSMRNWENKKNTVVVGVSAIDVDDHSDHGGHDDHSDHGGHDDHSKHSAKVDDHSDHGGH
DDHSDHGGHDDHAEGAFEWAGKFQLSKGSYKWSFEKVDGEYADPAMKMVILKSNDIEGSEDLAKELLGSKDSISRKNDGT
LIASNKAFVLNFDQKKESTVFNVDIKEDGQYIFFTEHMPFEFEATQHFFKDVSNSDVEPIAQVPDEGEGHHHHDHGGLDP
HVWHDPHNIIKMGDLISKSLKKDISVFNRGDRKLINERFEKADSLLEDLDSWIVEQVSSIPEENRVIVSKHKAMEYYGDA
FGFETISLLDFLGDSSSLRPDNISSTLKMLDEEKVQAIFPEQIPASKLLRNLSRQSSVPLASNQIFVDGLMMDGNTVSVA
VHNTCTIVDSLGGSCDKESGSNLESEWYKLSD

Specific function: This protein is probably a component of a manganese permease, a binding protein-dependent, ATP-driven transport system [H]

COG id: COG0803

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006127
- InterPro:   IPR006129
- InterPro:   IPR006128 [H]

Pfam domain/function: PF01297 SBP_bac_9 [H]

EC number: NA

Molecular weight: Translated: 56997; Mature: 56866

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFKRLLTNKKGASKSIIKNSVIAGTIIFSGFGQDVMAKGKSYVAVEPLVCDLVKSIAL
CHHHHHHHCCCCCCCHHHHHHHHHEEEEEECCCCHHHHHCCCCEEEECHHHHHHHHHHCC
PSDEVTCLVDRKQDVHDLKINPRQAKLLNSADKVFTLGREMTPSMRNWENKKNTVVVGVS
CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCEEEEEEE
AIDVDDHSDHGGHDDHSDHGGHDDHSKHSAKVDDHSDHGGHDDHSDHGGHDDHAEGAFEW
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
AGKFQLSKGSYKWSFEKVDGEYADPAMKMVILKSNDIEGSEDLAKELLGSKDSISRKNDG
CCEEEECCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCC
TLIASNKAFVLNFDQKKESTVFNVDIKEDGQYIFFTEHMPFEFEATQHFFKDVSNSDVEP
CEEECCCEEEEEECCCCCCEEEEEEEECCCCEEEEECCCCCEEHHHHHHHHHCCCCCCCH
IAQVPDEGEGHHHHDHGGLDPHVWHDPHNIIKMGDLISKSLKKDISVFNRGDRKLINERF
HHHCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
EKADSLLEDLDSWIVEQVSSIPEENRVIVSKHKAMEYYGDAFGFETISLLDFLGDSSSLR
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCHHHHHHHHHHCCCCCCC
PDNISSTLKMLDEEKVQAIFPEQIPASKLLRNLSRQSSVPLASNQIFVDGLMMDGNTVSV
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCEEEE
AVHNTCTIVDSLGGSCDKESGSNLESEWYKLSD
EECCCEEEHHHCCCCCCCCCCCCCHHCCEECCC
>Mature Secondary Structure 
SIFKRLLTNKKGASKSIIKNSVIAGTIIFSGFGQDVMAKGKSYVAVEPLVCDLVKSIAL
HHHHHHHCCCCCCCHHHHHHHHHEEEEEECCCCHHHHHCCCCEEEECHHHHHHHHHHCC
PSDEVTCLVDRKQDVHDLKINPRQAKLLNSADKVFTLGREMTPSMRNWENKKNTVVVGVS
CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCEEEEEEE
AIDVDDHSDHGGHDDHSDHGGHDDHSKHSAKVDDHSDHGGHDDHSDHGGHDDHAEGAFEW
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
AGKFQLSKGSYKWSFEKVDGEYADPAMKMVILKSNDIEGSEDLAKELLGSKDSISRKNDG
CCEEEECCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCC
TLIASNKAFVLNFDQKKESTVFNVDIKEDGQYIFFTEHMPFEFEATQHFFKDVSNSDVEP
CEEECCCEEEEEECCCCCCEEEEEEEECCCCEEEEECCCCCEEHHHHHHHHHCCCCCCCH
IAQVPDEGEGHHHHDHGGLDPHVWHDPHNIIKMGDLISKSLKKDISVFNRGDRKLINERF
HHHCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
EKADSLLEDLDSWIVEQVSSIPEENRVIVSKHKAMEYYGDAFGFETISLLDFLGDSSSLR
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCHHHHHHHHHHCCCCCCC
PDNISSTLKMLDEEKVQAIFPEQIPASKLLRNLSRQSSVPLASNQIFVDGLMMDGNTVSV
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCEEEE
AVHNTCTIVDSLGGSCDKESGSNLESEWYKLSD
EECCCEEEHHHCCCCCCCCCCCCCHHCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]