Click here to switch to the map view.

The map label for this gene is 126696396

Identifier: 126696396

GI number: 126696396

Start: 916358

End: 916699

Strand: Direct

Name: 126696396

Synonym: P9301_10581

Alternate gene names: NA

Gene position: 916358-916699 (Clockwise)

Preceding gene: 126696392

Following gene: 126696399

Centisome position: 55.81

GC content: 35.38

Gene sequence:

>342_bases
ATGCATAGACAAGATGCAATTTACCTTGATCAGTTTTGTCCCAAGACAAGTAATAAAAATTGGAGAGAGTCACTTAATAA
ACTTACCAATTATAAATGCATTTATTGCGGTAAACCCTCAGAATCACTCGACCACCTTCACCCAATGTCAAAAGGGGGGA
TTAGCAGTACAAGTAATTGCGTACCATGTTGTTTGTCATGTAATGGAAAGAAATCAGATTCAGAAGTTCTTAGCTGGTAC
AGAAAACAAAATTTTTATGATCCTCGAAGAGCTATGGCGATACGAGCATGGTTTAATGATGATTTAAAACTAGCGTCAGT
TCTTTTAAACTACTTACATTAA

Upstream 100 bases:

>100_bases
GTTTCATAAGAAACATTTACTTTAAGAAGTCTTATTTTATCTTGATAAATCATACTTTAAAAAAAACTGTTATTATTCAA
AGAAAATTATCAAGAATTTT

Downstream 100 bases:

>100_bases
ACAATGAATAATAAATTGATTGAGATTAGAAAAAATATTTTTGTATATCTTTGAATAGGATCCTTTTTTTAGCAAACATT
GTTTTTATTAAATTATTCTT

Product: HNH endonuclease:HNH nuclease

Products: NA

Alternate protein names: HNH Nuclease; McrA/HNH Family Nuclease

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MHRQDAIYLDQFCPKTSNKNWRESLNKLTNYKCIYCGKPSESLDHLHPMSKGGISSTSNCVPCCLSCNGKKSDSEVLSWY
RKQNFYDPRRAMAIRAWFNDDLKLASVLLNYLH

Sequences:

>Translated_113_residues
MHRQDAIYLDQFCPKTSNKNWRESLNKLTNYKCIYCGKPSESLDHLHPMSKGGISSTSNCVPCCLSCNGKKSDSEVLSWY
RKQNFYDPRRAMAIRAWFNDDLKLASVLLNYLH
>Mature_113_residues
MHRQDAIYLDQFCPKTSNKNWRESLNKLTNYKCIYCGKPSESLDHLHPMSKGGISSTSNCVPCCLSCNGKKSDSEVLSWY
RKQNFYDPRRAMAIRAWFNDDLKLASVLLNYLH

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13097; Mature: 13097

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRQDAIYLDQFCPKTSNKNWRESLNKLTNYKCIYCGKPSESLDHLHPMSKGGISSTSNC
CCCCCCCHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCC
VPCCLSCNGKKSDSEVLSWYRKQNFYDPRRAMAIRAWFNDDLKLASVLLNYLH
CEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHC
>Mature Secondary Structure
MHRQDAIYLDQFCPKTSNKNWRESLNKLTNYKCIYCGKPSESLDHLHPMSKGGISSTSNC
CCCCCCCHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCC
VPCCLSCNGKKSDSEVLSWYRKQNFYDPRRAMAIRAWFNDDLKLASVLLNYLH
CEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA