Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

Click here to switch to the map view.

The map label for this gene is 126696392

Identifier: 126696392

GI number: 126696392

Start: 913664

End: 914458

Strand: Direct

Name: 126696392

Synonym: P9301_10541

Alternate gene names: NA

Gene position: 913664-914458 (Clockwise)

Preceding gene: 126696391

Following gene: 126696396

Centisome position: 55.65

GC content: 26.29

Gene sequence:

>795_bases
ATGAATATAAGAAAATATTCAAAAGTTTATAAAAAATTCTTACATACTTCTTTAGCTTCTGAATTGGAGTATAAGACAAA
TATATTAGTTGATTTAATTACTGCAATTTTAAGTTTAGTAGGGAGTATTTTTCTATTATCTATTTTCTTTCAAAATAATG
GATATATTGGAGGTTGGAAATTTGAACAGGCATTAATCATCCAAGCTATCTATACAATTTTGAATGGAATAACAAATACA
TGGTTCAATCCTAATCTTACAGAAATAGTTAAACATATAAGAGAAGGAACATTAGACTTCGTACTTTTAAAACCTATTGA
TAGTCAATTTTTTATTTCATTAAAAAAAATAAATCCATCCGGATTTTTAGAAATTATGCTTGGATTTTTCCTGTTGCTCT
TCTGCATAAGAATAAATCAAATAAATTTAAGTTTAAGTTTTCTATGCCTATCCTTGATTACGATAAGCTGCTCAATTTGT
ATTCTATATAGCCTATGGTTTTTTATATCTACTACTACTATTTGGTTTGTTAAGACTTGGAATGCAATAGAAGTATTAAG
ATCATTTCTTTATATTGGAAGATTTCCTCTAAATTCATTTTCATTTTCTTTAAGAGTTTTTTTTAGTATTTTCATTCCTA
TTGCTTTTATAACTACGATTCCTTCTGAAGTTTTTCTAGGACTTTCTCAATTGTGGAAAATATTGCTTGAAGTTATTGTT
GCTTCAGTATTTCTTATAACTTCAAGAAAGTTCTGGTTATTTGCACTAAAGTTCTATTCATCAGCATCTAGCTAA

Upstream 100 bases:

>100_bases
GTGGAGGCTTAATTATGCAAATTCTATGGATTTTTATACTTTTCCCGTTATTTAAGAAAATCTGGTCTGAAGGAACGAAA
AAATATACAGCAATGGGTTC

Downstream 100 bases:

>100_bases
CTATTATTTAATAACCTCCCTGCAAAATTCCCAAATTTGTTGTTTGCTTTTCAGATTAGAAAGCTTAGATAATTTCTTGA
AATGAGGTTTAGATTTTTCC

Product: membrane protein, multidrug efflux associated

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNIRKYSKVYKKFLHTSLASELEYKTNILVDLITAILSLVGSIFLLSIFFQNNGYIGGWKFEQALIIQAIYTILNGITNT
WFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKKINPSGFLEIMLGFFLLLFCIRINQINLSLSFLCLSLITISCSIC
ILYSLWFFISTTTIWFVKTWNAIEVLRSFLYIGRFPLNSFSFSLRVFFSIFIPIAFITTIPSEVFLGLSQLWKILLEVIV
ASVFLITSRKFWLFALKFYSSASS

Sequences:

>Translated_264_residues
MNIRKYSKVYKKFLHTSLASELEYKTNILVDLITAILSLVGSIFLLSIFFQNNGYIGGWKFEQALIIQAIYTILNGITNT
WFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKKINPSGFLEIMLGFFLLLFCIRINQINLSLSFLCLSLITISCSIC
ILYSLWFFISTTTIWFVKTWNAIEVLRSFLYIGRFPLNSFSFSLRVFFSIFIPIAFITTIPSEVFLGLSQLWKILLEVIV
ASVFLITSRKFWLFALKFYSSASS
>Mature_264_residues
MNIRKYSKVYKKFLHTSLASELEYKTNILVDLITAILSLVGSIFLLSIFFQNNGYIGGWKFEQALIIQAIYTILNGITNT
WFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKKINPSGFLEIMLGFFLLLFCIRINQINLSLSFLCLSLITISCSIC
ILYSLWFFISTTTIWFVKTWNAIEVLRSFLYIGRFPLNSFSFSLRVFFSIFIPIAFITTIPSEVFLGLSQLWKILLEVIV
ASVFLITSRKFWLFALKFYSSASS

Specific function: Unknown

COG id: COG3694

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30478; Mature: 30478

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRKYSKVYKKFLHTSLASELEYKTNILVDLITAILSLVGSIFLLSIFFQNNGYIGGWK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHH
FEQALIIQAIYTILNGITNTWFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKKINPS
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHEEEEEECCCH
GFLEIMLGFFLLLFCIRINQINLSLSFLCLSLITISCSICILYSLWFFISTTTIWFVKTW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
NAIEVLRSFLYIGRFPLNSFSFSLRVFFSIFIPIAFITTIPSEVFLGLSQLWKILLEVIV
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASVFLITSRKFWLFALKFYSSASS
HHHHHHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNIRKYSKVYKKFLHTSLASELEYKTNILVDLITAILSLVGSIFLLSIFFQNNGYIGGWK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHH
FEQALIIQAIYTILNGITNTWFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKKINPS
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHEEEEEECCCH
GFLEIMLGFFLLLFCIRINQINLSLSFLCLSLITISCSICILYSLWFFISTTTIWFVKTW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
NAIEVLRSFLYIGRFPLNSFSFSLRVFFSIFIPIAFITTIPSEVFLGLSQLWKILLEVIV
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASVFLITSRKFWLFALKFYSSASS
HHHHHHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA