| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696392
Identifier: 126696392
GI number: 126696392
Start: 913664
End: 914458
Strand: Direct
Name: 126696392
Synonym: P9301_10541
Alternate gene names: NA
Gene position: 913664-914458 (Clockwise)
Preceding gene: 126696391
Following gene: 126696396
Centisome position: 55.65
GC content: 26.29
Gene sequence:
>795_bases ATGAATATAAGAAAATATTCAAAAGTTTATAAAAAATTCTTACATACTTCTTTAGCTTCTGAATTGGAGTATAAGACAAA TATATTAGTTGATTTAATTACTGCAATTTTAAGTTTAGTAGGGAGTATTTTTCTATTATCTATTTTCTTTCAAAATAATG GATATATTGGAGGTTGGAAATTTGAACAGGCATTAATCATCCAAGCTATCTATACAATTTTGAATGGAATAACAAATACA TGGTTCAATCCTAATCTTACAGAAATAGTTAAACATATAAGAGAAGGAACATTAGACTTCGTACTTTTAAAACCTATTGA TAGTCAATTTTTTATTTCATTAAAAAAAATAAATCCATCCGGATTTTTAGAAATTATGCTTGGATTTTTCCTGTTGCTCT TCTGCATAAGAATAAATCAAATAAATTTAAGTTTAAGTTTTCTATGCCTATCCTTGATTACGATAAGCTGCTCAATTTGT ATTCTATATAGCCTATGGTTTTTTATATCTACTACTACTATTTGGTTTGTTAAGACTTGGAATGCAATAGAAGTATTAAG ATCATTTCTTTATATTGGAAGATTTCCTCTAAATTCATTTTCATTTTCTTTAAGAGTTTTTTTTAGTATTTTCATTCCTA TTGCTTTTATAACTACGATTCCTTCTGAAGTTTTTCTAGGACTTTCTCAATTGTGGAAAATATTGCTTGAAGTTATTGTT GCTTCAGTATTTCTTATAACTTCAAGAAAGTTCTGGTTATTTGCACTAAAGTTCTATTCATCAGCATCTAGCTAA
Upstream 100 bases:
>100_bases GTGGAGGCTTAATTATGCAAATTCTATGGATTTTTATACTTTTCCCGTTATTTAAGAAAATCTGGTCTGAAGGAACGAAA AAATATACAGCAATGGGTTC
Downstream 100 bases:
>100_bases CTATTATTTAATAACCTCCCTGCAAAATTCCCAAATTTGTTGTTTGCTTTTCAGATTAGAAAGCTTAGATAATTTCTTGA AATGAGGTTTAGATTTTTCC
Product: membrane protein, multidrug efflux associated
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MNIRKYSKVYKKFLHTSLASELEYKTNILVDLITAILSLVGSIFLLSIFFQNNGYIGGWKFEQALIIQAIYTILNGITNT WFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKKINPSGFLEIMLGFFLLLFCIRINQINLSLSFLCLSLITISCSIC ILYSLWFFISTTTIWFVKTWNAIEVLRSFLYIGRFPLNSFSFSLRVFFSIFIPIAFITTIPSEVFLGLSQLWKILLEVIV ASVFLITSRKFWLFALKFYSSASS
Sequences:
>Translated_264_residues MNIRKYSKVYKKFLHTSLASELEYKTNILVDLITAILSLVGSIFLLSIFFQNNGYIGGWKFEQALIIQAIYTILNGITNT WFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKKINPSGFLEIMLGFFLLLFCIRINQINLSLSFLCLSLITISCSIC ILYSLWFFISTTTIWFVKTWNAIEVLRSFLYIGRFPLNSFSFSLRVFFSIFIPIAFITTIPSEVFLGLSQLWKILLEVIV ASVFLITSRKFWLFALKFYSSASS >Mature_264_residues MNIRKYSKVYKKFLHTSLASELEYKTNILVDLITAILSLVGSIFLLSIFFQNNGYIGGWKFEQALIIQAIYTILNGITNT WFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKKINPSGFLEIMLGFFLLLFCIRINQINLSLSFLCLSLITISCSIC ILYSLWFFISTTTIWFVKTWNAIEVLRSFLYIGRFPLNSFSFSLRVFFSIFIPIAFITTIPSEVFLGLSQLWKILLEVIV ASVFLITSRKFWLFALKFYSSASS
Specific function: Unknown
COG id: COG3694
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30478; Mature: 30478
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIRKYSKVYKKFLHTSLASELEYKTNILVDLITAILSLVGSIFLLSIFFQNNGYIGGWK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHH FEQALIIQAIYTILNGITNTWFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKKINPS HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHEEEEEECCCH GFLEIMLGFFLLLFCIRINQINLSLSFLCLSLITISCSICILYSLWFFISTTTIWFVKTW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC NAIEVLRSFLYIGRFPLNSFSFSLRVFFSIFIPIAFITTIPSEVFLGLSQLWKILLEVIV CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASVFLITSRKFWLFALKFYSSASS HHHHHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure MNIRKYSKVYKKFLHTSLASELEYKTNILVDLITAILSLVGSIFLLSIFFQNNGYIGGWK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHH FEQALIIQAIYTILNGITNTWFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKKINPS HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHEEEEEECCCH GFLEIMLGFFLLLFCIRINQINLSLSFLCLSLITISCSICILYSLWFFISTTTIWFVKTW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC NAIEVLRSFLYIGRFPLNSFSFSLRVFFSIFIPIAFITTIPSEVFLGLSQLWKILLEVIV CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASVFLITSRKFWLFALKFYSSASS HHHHHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA