Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

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The map label for this gene is 126696391

Identifier: 126696391

GI number: 126696391

Start: 912873

End: 913667

Strand: Direct

Name: 126696391

Synonym: P9301_10531

Alternate gene names: NA

Gene position: 912873-913667 (Clockwise)

Preceding gene: 126696389

Following gene: 126696392

Centisome position: 55.6

GC content: 29.94

Gene sequence:

>795_bases
ATGATATCTAATTTAATTAAACGTAAAATTTTCACTTTATTAAAAGTCCAATATTCAAACATGTTGGAATACAGGGTAGA
AATTGCATTATGGGCAATTTCAGGGATTATTCCTTTTTTCATGTTAAACATTTGGACAAACAATAATCTTAATGAATCCA
TAAACATCAGCGATGTTATGCTTTCTAGGTATTTCTTATGTGCTTTTTTTGTAAGACAGTTTTCTGTAGTCTGGGTTGTA
TTTAGTTTTGAAGAGGATTCTCTTATGGGGAAAGTATCTCCGTATTTAATCCAACCTTTAAATCCATTTTTCAGATATTT
TGCACAACATCTAGCGGAACAAATAACAAGATTTCCTTTTGCACTAATAATCGCATTTTTCTTTTTTATTTTTAATCCAG
AAAGTTTATGGATACCAAATTTAGGTATTTTACTCTTATCAATAGTATCTACTTTCTTATCCTTCTTGATTCAATTTTTA
ATTCAGTCAATAGTTGCATGTCTATGTTTCTGGACAGAAAAAGCATCATCGATTGAAAGATTGTTATTTATTCCAACTTT
ATTTCTCTCAGGTCTTTTAGCACCAGTAGTCTCATTTCCAAATTACGTTAAATCTTGGATTTATTTGACTCCTTTTCCAT
ATCTAATTGATTTCCCTGCGAACTTACTGTCAGGTAATGAAACAAATATTAGTGGAGGCTTAATTATGCAAATTCTATGG
ATTTTTATACTTTTCCCGTTATTTAAGAAAATCTGGTCTGAAGGAACGAAAAAATATACAGCAATGGGTTCATGA

Upstream 100 bases:

>100_bases
TCACTAAAAACTATCCTAAATAATTTTGATATTGAAGACCTTTTTATAAATGAACCACCTATAGATGAAGTTATTGGGAA
GGTATTAATCAAAAAAGATT

Downstream 100 bases:

>100_bases
ATATAAGAAAATATTCAAAAGTTTATAAAAAATTCTTACATACTTCTTTAGCTTCTGAATTGGAGTATAAGACAAATATA
TTAGTTGATTTAATTACTGC

Product: putative multidrug efflux ABC transporter

Products: NA

Alternate protein names: Abc Transporter Integral Membrane Protein; ABC Transporter Inner Membrane Subunit; ABC Transporter Permease; Abc Transporter Permease Protein; ABC Transporter Permease Protein; ABC-Type Transport System Permease Component-Like; Integral Membrane Protein; ABC-2 Type Transport System Permease Protein

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MISNLIKRKIFTLLKVQYSNMLEYRVEIALWAISGIIPFFMLNIWTNNNLNESINISDVMLSRYFLCAFFVRQFSVVWVV
FSFEEDSLMGKVSPYLIQPLNPFFRYFAQHLAEQITRFPFALIIAFFFFIFNPESLWIPNLGILLLSIVSTFLSFLIQFL
IQSIVACLCFWTEKASSIERLLFIPTLFLSGLLAPVVSFPNYVKSWIYLTPFPYLIDFPANLLSGNETNISGGLIMQILW
IFILFPLFKKIWSEGTKKYTAMGS

Sequences:

>Translated_264_residues
MISNLIKRKIFTLLKVQYSNMLEYRVEIALWAISGIIPFFMLNIWTNNNLNESINISDVMLSRYFLCAFFVRQFSVVWVV
FSFEEDSLMGKVSPYLIQPLNPFFRYFAQHLAEQITRFPFALIIAFFFFIFNPESLWIPNLGILLLSIVSTFLSFLIQFL
IQSIVACLCFWTEKASSIERLLFIPTLFLSGLLAPVVSFPNYVKSWIYLTPFPYLIDFPANLLSGNETNISGGLIMQILW
IFILFPLFKKIWSEGTKKYTAMGS
>Mature_264_residues
MISNLIKRKIFTLLKVQYSNMLEYRVEIALWAISGIIPFFMLNIWTNNNLNESINISDVMLSRYFLCAFFVRQFSVVWVV
FSFEEDSLMGKVSPYLIQPLNPFFRYFAQHLAEQITRFPFALIIAFFFFIFNPESLWIPNLGILLLSIVSTFLSFLIQFL
IQSIVACLCFWTEKASSIERLLFIPTLFLSGLLAPVVSFPNYVKSWIYLTPFPYLIDFPANLLSGNETNISGGLIMQILW
IFILFPLFKKIWSEGTKKYTAMGS

Specific function: Unknown

COG id: COG4587

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30691; Mature: 30691

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISNLIKRKIFTLLKVQYSNMLEYRVEIALWAISGIIPFFMLNIWTNNNLNESINISDVM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
LSRYFLCAFFVRQFSVVWVVFSFEEDSLMGKVSPYLIQPLNPFFRYFAQHLAEQITRFPF
HHHHHHHHHHHHHHHHHHEEEECCCCHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCHH
ALIIAFFFFIFNPESLWIPNLGILLLSIVSTFLSFLIQFLIQSIVACLCFWTEKASSIER
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFIPTLFLSGLLAPVVSFPNYVKSWIYLTPFPYLIDFPANLLSGNETNISGGLIMQILW
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHCCHHHHCCCCCCCCCHHHHHHHH
IFILFPLFKKIWSEGTKKYTAMGS
HHHHHHHHHHHHHCCCHHHCCCCC
>Mature Secondary Structure
MISNLIKRKIFTLLKVQYSNMLEYRVEIALWAISGIIPFFMLNIWTNNNLNESINISDVM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
LSRYFLCAFFVRQFSVVWVVFSFEEDSLMGKVSPYLIQPLNPFFRYFAQHLAEQITRFPF
HHHHHHHHHHHHHHHHHHEEEECCCCHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCHH
ALIIAFFFFIFNPESLWIPNLGILLLSIVSTFLSFLIQFLIQSIVACLCFWTEKASSIER
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFIPTLFLSGLLAPVVSFPNYVKSWIYLTPFPYLIDFPANLLSGNETNISGGLIMQILW
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHCCHHHHCCCCCCCCCHHHHHHHH
IFILFPLFKKIWSEGTKKYTAMGS
HHHHHHHHHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA