| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696391
Identifier: 126696391
GI number: 126696391
Start: 912873
End: 913667
Strand: Direct
Name: 126696391
Synonym: P9301_10531
Alternate gene names: NA
Gene position: 912873-913667 (Clockwise)
Preceding gene: 126696389
Following gene: 126696392
Centisome position: 55.6
GC content: 29.94
Gene sequence:
>795_bases ATGATATCTAATTTAATTAAACGTAAAATTTTCACTTTATTAAAAGTCCAATATTCAAACATGTTGGAATACAGGGTAGA AATTGCATTATGGGCAATTTCAGGGATTATTCCTTTTTTCATGTTAAACATTTGGACAAACAATAATCTTAATGAATCCA TAAACATCAGCGATGTTATGCTTTCTAGGTATTTCTTATGTGCTTTTTTTGTAAGACAGTTTTCTGTAGTCTGGGTTGTA TTTAGTTTTGAAGAGGATTCTCTTATGGGGAAAGTATCTCCGTATTTAATCCAACCTTTAAATCCATTTTTCAGATATTT TGCACAACATCTAGCGGAACAAATAACAAGATTTCCTTTTGCACTAATAATCGCATTTTTCTTTTTTATTTTTAATCCAG AAAGTTTATGGATACCAAATTTAGGTATTTTACTCTTATCAATAGTATCTACTTTCTTATCCTTCTTGATTCAATTTTTA ATTCAGTCAATAGTTGCATGTCTATGTTTCTGGACAGAAAAAGCATCATCGATTGAAAGATTGTTATTTATTCCAACTTT ATTTCTCTCAGGTCTTTTAGCACCAGTAGTCTCATTTCCAAATTACGTTAAATCTTGGATTTATTTGACTCCTTTTCCAT ATCTAATTGATTTCCCTGCGAACTTACTGTCAGGTAATGAAACAAATATTAGTGGAGGCTTAATTATGCAAATTCTATGG ATTTTTATACTTTTCCCGTTATTTAAGAAAATCTGGTCTGAAGGAACGAAAAAATATACAGCAATGGGTTCATGA
Upstream 100 bases:
>100_bases TCACTAAAAACTATCCTAAATAATTTTGATATTGAAGACCTTTTTATAAATGAACCACCTATAGATGAAGTTATTGGGAA GGTATTAATCAAAAAAGATT
Downstream 100 bases:
>100_bases ATATAAGAAAATATTCAAAAGTTTATAAAAAATTCTTACATACTTCTTTAGCTTCTGAATTGGAGTATAAGACAAATATA TTAGTTGATTTAATTACTGC
Product: putative multidrug efflux ABC transporter
Products: NA
Alternate protein names: Abc Transporter Integral Membrane Protein; ABC Transporter Inner Membrane Subunit; ABC Transporter Permease; Abc Transporter Permease Protein; ABC Transporter Permease Protein; ABC-Type Transport System Permease Component-Like; Integral Membrane Protein; ABC-2 Type Transport System Permease Protein
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MISNLIKRKIFTLLKVQYSNMLEYRVEIALWAISGIIPFFMLNIWTNNNLNESINISDVMLSRYFLCAFFVRQFSVVWVV FSFEEDSLMGKVSPYLIQPLNPFFRYFAQHLAEQITRFPFALIIAFFFFIFNPESLWIPNLGILLLSIVSTFLSFLIQFL IQSIVACLCFWTEKASSIERLLFIPTLFLSGLLAPVVSFPNYVKSWIYLTPFPYLIDFPANLLSGNETNISGGLIMQILW IFILFPLFKKIWSEGTKKYTAMGS
Sequences:
>Translated_264_residues MISNLIKRKIFTLLKVQYSNMLEYRVEIALWAISGIIPFFMLNIWTNNNLNESINISDVMLSRYFLCAFFVRQFSVVWVV FSFEEDSLMGKVSPYLIQPLNPFFRYFAQHLAEQITRFPFALIIAFFFFIFNPESLWIPNLGILLLSIVSTFLSFLIQFL IQSIVACLCFWTEKASSIERLLFIPTLFLSGLLAPVVSFPNYVKSWIYLTPFPYLIDFPANLLSGNETNISGGLIMQILW IFILFPLFKKIWSEGTKKYTAMGS >Mature_264_residues MISNLIKRKIFTLLKVQYSNMLEYRVEIALWAISGIIPFFMLNIWTNNNLNESINISDVMLSRYFLCAFFVRQFSVVWVV FSFEEDSLMGKVSPYLIQPLNPFFRYFAQHLAEQITRFPFALIIAFFFFIFNPESLWIPNLGILLLSIVSTFLSFLIQFL IQSIVACLCFWTEKASSIERLLFIPTLFLSGLLAPVVSFPNYVKSWIYLTPFPYLIDFPANLLSGNETNISGGLIMQILW IFILFPLFKKIWSEGTKKYTAMGS
Specific function: Unknown
COG id: COG4587
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30691; Mature: 30691
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISNLIKRKIFTLLKVQYSNMLEYRVEIALWAISGIIPFFMLNIWTNNNLNESINISDVM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH LSRYFLCAFFVRQFSVVWVVFSFEEDSLMGKVSPYLIQPLNPFFRYFAQHLAEQITRFPF HHHHHHHHHHHHHHHHHHEEEECCCCHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCHH ALIIAFFFFIFNPESLWIPNLGILLLSIVSTFLSFLIQFLIQSIVACLCFWTEKASSIER HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFIPTLFLSGLLAPVVSFPNYVKSWIYLTPFPYLIDFPANLLSGNETNISGGLIMQILW HHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHCCHHHHCCCCCCCCCHHHHHHHH IFILFPLFKKIWSEGTKKYTAMGS HHHHHHHHHHHHHCCCHHHCCCCC >Mature Secondary Structure MISNLIKRKIFTLLKVQYSNMLEYRVEIALWAISGIIPFFMLNIWTNNNLNESINISDVM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH LSRYFLCAFFVRQFSVVWVVFSFEEDSLMGKVSPYLIQPLNPFFRYFAQHLAEQITRFPF HHHHHHHHHHHHHHHHHHEEEECCCCHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCHH ALIIAFFFFIFNPESLWIPNLGILLLSIVSTFLSFLIQFLIQSIVACLCFWTEKASSIER HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFIPTLFLSGLLAPVVSFPNYVKSWIYLTPFPYLIDFPANLLSGNETNISGGLIMQILW HHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHCCHHHHCCCCCCCCCHHHHHHHH IFILFPLFKKIWSEGTKKYTAMGS HHHHHHHHHHHHHCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA