| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is kch [C]
Identifier: 126696109
GI number: 126696109
Start: 670121
End: 671176
Strand: Direct
Name: kch [C]
Synonym: P9301_07711
Alternate gene names: 126696109
Gene position: 670121-671176 (Clockwise)
Preceding gene: 126696108
Following gene: 126696110
Centisome position: 40.81
GC content: 34.0
Gene sequence:
>1056_bases ATGAAGCTTAGATTATTTGAGTTCTATTTTATTAAAGACTATTTAAGGCCTTGGTTTGGTCTTATTTATTCTTTATTCTT TCTGTTTTTTTTAGGTGCAATTGGCTATCGAATAACAGAGGGATGGGAATGGAGTGATTGCTTATGGATGGTTCTGATCA CAATAACCACTATTGGTTTTGGAGAAGTTCAACCTTTAAGCCCTGAAGGCAGGATAGTAACTGTTTTAGTAATCGTAGGC GGATTGATCTTTATTCAATTTACCTTTCAAAAAGCTGTTAGATTATTCGAATCCGGCTATTTTCAAAGAGTAAACGAATT ACGTTTTAAAAGACTTCTTAGAAAAATGGAAAATCATGTAATTTTGTGCGGATATGGGAGGGTAGGTCAGGAAATATCTA ACCAAATAAAAACGCAAAATATTCCAATTATTGTTGTTGAGAGCGATGAAGATAGAAAAAAGATTGCTGAAGAAAATGGT TTAGAAGTTCTTTGCGCTGATGCAACTCTTGACGAGACTTTAAAACTAGCAGGATTAGAAAAATGCAAAAGTTTGGTCGT CACTTTACCTAATGATGCTGCAAATTTATATGTAGTTTTGAGTGCTAAAGGGATAAGAAGTTCTATAAGAGTAATTGCAA GAGCTGGAACTGAAGAAGCCGCAAGTAAATTGAGATTAGCTGGAGCAAGTATAGTCGTAAGCCCTTATATAGCTGCAGGA AGAGCAATGGCATCAATGGCTTTAAGACCAATTGCTATTGATTTTCTAGATCTACTTGCAGGAAGTGAATGTGAAATTGA AGAATTTGAATTAAGTAATGATATTAGTCTTTTTGAAACAGCAGAGAAAAGATCACTTTCTGAACTTGGAATAGGTAAAA AAAGCGGTGCAAAAATATTAGCCATTAAAGAAAATGAAAAGTTGTTCACTAATCCTGGAGGTAATTTCATACTTCAACCA GGTCAAGTATTAATAGCCTTTGGTAGTAAAGAACAGCTAAATATTTTGAATGGTCTGTTAGGTAATCTTGTTGTAGCAGT AGAGCTATTAAAGTAG
Upstream 100 bases:
>100_bases ATCCTGCTTAATATATATTTCACTTAAACAAATAAATAGTTTTAGGAACATAATAGAAAATTTTTTTGAAATTTTTGAAT AGTTAACGATAATAAGGGAT
Downstream 100 bases:
>100_bases ATAGATCGAGATTCAGAATTAATTGCTAAATTGATTGTGGGTGGAAAAAATCAAATGAAAATATTTAAATTTCTATTTGT AATTCCTTTAATAACTTTAA
Product: VIC family potassium channel protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: MjK1 [H]
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MKLRLFEFYFIKDYLRPWFGLIYSLFFLFFLGAIGYRITEGWEWSDCLWMVLITITTIGFGEVQPLSPEGRIVTVLVIVG GLIFIQFTFQKAVRLFESGYFQRVNELRFKRLLRKMENHVILCGYGRVGQEISNQIKTQNIPIIVVESDEDRKKIAEENG LEVLCADATLDETLKLAGLEKCKSLVVTLPNDAANLYVVLSAKGIRSSIRVIARAGTEEAASKLRLAGASIVVSPYIAAG RAMASMALRPIAIDFLDLLAGSECEIEEFELSNDISLFETAEKRSLSELGIGKKSGAKILAIKENEKLFTNPGGNFILQP GQVLIAFGSKEQLNILNGLLGNLVVAVELLK
Sequences:
>Translated_351_residues MKLRLFEFYFIKDYLRPWFGLIYSLFFLFFLGAIGYRITEGWEWSDCLWMVLITITTIGFGEVQPLSPEGRIVTVLVIVG GLIFIQFTFQKAVRLFESGYFQRVNELRFKRLLRKMENHVILCGYGRVGQEISNQIKTQNIPIIVVESDEDRKKIAEENG LEVLCADATLDETLKLAGLEKCKSLVVTLPNDAANLYVVLSAKGIRSSIRVIARAGTEEAASKLRLAGASIVVSPYIAAG RAMASMALRPIAIDFLDLLAGSECEIEEFELSNDISLFETAEKRSLSELGIGKKSGAKILAIKENEKLFTNPGGNFILQP GQVLIAFGSKEQLNILNGLLGNLVVAVELLK >Mature_351_residues MKLRLFEFYFIKDYLRPWFGLIYSLFFLFFLGAIGYRITEGWEWSDCLWMVLITITTIGFGEVQPLSPEGRIVTVLVIVG GLIFIQFTFQKAVRLFESGYFQRVNELRFKRLLRKMENHVILCGYGRVGQEISNQIKTQNIPIIVVESDEDRKKIAEENG LEVLCADATLDETLKLAGLEKCKSLVVTLPNDAANLYVVLSAKGIRSSIRVIARAGTEEAASKLRLAGASIVVSPYIAAG RAMASMALRPIAIDFLDLLAGSECEIEEFELSNDISLFETAEKRSLSELGIGKKSGAKILAIKENEKLFTNPGGNFILQP GQVLIAFGSKEQLNILNGLLGNLVVAVELLK
Specific function: Potassium channel protein. Seems to conduct potassium at low membrane potentials [H]
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787503, Length=195, Percent_Identity=25.1282051282051, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1786685, Length=116, Percent_Identity=33.6206896551724, Blast_Score=73, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013099 - InterPro: IPR003280 - InterPro: IPR016040 - InterPro: IPR006037 - InterPro: IPR003148 [H]
Pfam domain/function: PF07885 Ion_trans_2; PF02080 TrkA_C; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 39010; Mature: 39010
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRLFEFYFIKDYLRPWFGLIYSLFFLFFLGAIGYRITEGWEWSDCLWMVLITITTIGF CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHCCC GEVQPLSPEGRIVTVLVIVGGLIFIQFTFQKAVRLFESGYFQRVNELRFKRLLRKMENHV CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE ILCGYGRVGQEISNQIKTQNIPIIVVESDEDRKKIAEENGLEVLCADATLDETLKLAGLE EEEECCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHH KCKSLVVTLPNDAANLYVVLSAKGIRSSIRVIARAGTEEAASKLRLAGASIVVSPYIAAG HHHHEEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCHHHHH RAMASMALRPIAIDFLDLLAGSECEIEEFELSNDISLFETAEKRSLSELGIGKKSGAKIL HHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEE AIKENEKLFTNPGGNFILQPGQVLIAFGSKEQLNILNGLLGNLVVAVELLK EEECCCEEEECCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLRLFEFYFIKDYLRPWFGLIYSLFFLFFLGAIGYRITEGWEWSDCLWMVLITITTIGF CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHCCC GEVQPLSPEGRIVTVLVIVGGLIFIQFTFQKAVRLFESGYFQRVNELRFKRLLRKMENHV CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE ILCGYGRVGQEISNQIKTQNIPIIVVESDEDRKKIAEENGLEVLCADATLDETLKLAGLE EEEECCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHH KCKSLVVTLPNDAANLYVVLSAKGIRSSIRVIARAGTEEAASKLRLAGASIVVSPYIAAG HHHHEEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCHHHHH RAMASMALRPIAIDFLDLLAGSECEIEEFELSNDISLFETAEKRSLSELGIGKKSGAKIL HHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEE AIKENEKLFTNPGGNFILQPGQVLIAFGSKEQLNILNGLLGNLVVAVELLK EEECCCEEEECCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]