| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696030
Identifier: 126696030
GI number: 126696030
Start: 615754
End: 616239
Strand: Direct
Name: 126696030
Synonym: P9301_06921
Alternate gene names: NA
Gene position: 615754-616239 (Clockwise)
Preceding gene: 126696026
Following gene: 126696031
Centisome position: 37.5
GC content: 26.34
Gene sequence:
>486_bases ATGAAAAATTTTCTTTTTGAAACACTGAATAAAAATATTTTATTAATAATATTGGCTTATTTGTTTTGCCAAGGATCAAT TCTTAATGCACAAGAAAAAAAAATACATTCACTTCCCATAAAAAAAGAATCTATACAACCCGATAAATCTACGAAAGATC TCATTCCGATGCCCTCAGGAGATATCAATACTTCTTCAACCAAAGTTAATTTCAATAGAAATCCTTTTCAAGAACCTTTA AAAACTGAATTTCCAACAATAGAAAATTTATATTCAACTTTAAAATTCAGAGGATTAGCACATTCAGATAATAAGCTTTT TGCCATCATTGAAACAGACAGTAATCAAAAATTTTATAAGGTTGGAGATTATCTTGATAATGGATTTGTGATTCAATTTA TTTCATTAGATAATGTAACTGTTGATATCTCAAATGGATCTAAAAATTACAGACTTTCTTTAGTAGATATTGAGAAACTA ATATGA
Upstream 100 bases:
>100_bases ACATATAATAAGGATTAATAGTACTTTATTTCAAAATGAAGCTATAATTTTTATTAGTCGTCTAGATAAATATATTTTTC AACAGTTTTTTTTCGGATCA
Downstream 100 bases:
>100_bases AAAAGAACAAAACATCTACTTTTAAGAAGTTTATAAATAAAATTGGGCAATTTAAATCTATTAATTATCTATCAAAGATA AAATTTACTAAATTAAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKNFLFETLNKNILLIILAYLFCQGSILNAQEKKIHSLPIKKESIQPDKSTKDLIPMPSGDINTSSTKVNFNRNPFQEPL KTEFPTIENLYSTLKFRGLAHSDNKLFAIIETDSNQKFYKVGDYLDNGFVIQFISLDNVTVDISNGSKNYRLSLVDIEKL I
Sequences:
>Translated_161_residues MKNFLFETLNKNILLIILAYLFCQGSILNAQEKKIHSLPIKKESIQPDKSTKDLIPMPSGDINTSSTKVNFNRNPFQEPL KTEFPTIENLYSTLKFRGLAHSDNKLFAIIETDSNQKFYKVGDYLDNGFVIQFISLDNVTVDISNGSKNYRLSLVDIEKL I >Mature_161_residues MKNFLFETLNKNILLIILAYLFCQGSILNAQEKKIHSLPIKKESIQPDKSTKDLIPMPSGDINTSSTKVNFNRNPFQEPL KTEFPTIENLYSTLKFRGLAHSDNKLFAIIETDSNQKFYKVGDYLDNGFVIQFISLDNVTVDISNGSKNYRLSLVDIEKL I
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18380; Mature: 18380
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNFLFETLNKNILLIILAYLFCQGSILNAQEKKIHSLPIKKESIQPDKSTKDLIPMPSG CCCCHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC DINTSSTKVNFNRNPFQEPLKTEFPTIENLYSTLKFRGLAHSDNKLFAIIETDSNQKFYK CCCCCCEEEECCCCCCCCCHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEE VGDYLDNGFVIQFISLDNVTVDISNGSKNYRLSLVDIEKLI ECCCCCCCEEEEEEECCCEEEEECCCCCCEEEEEEEHHHCC >Mature Secondary Structure MKNFLFETLNKNILLIILAYLFCQGSILNAQEKKIHSLPIKKESIQPDKSTKDLIPMPSG CCCCHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC DINTSSTKVNFNRNPFQEPLKTEFPTIENLYSTLKFRGLAHSDNKLFAIIETDSNQKFYK CCCCCCEEEECCCCCCCCCHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEE VGDYLDNGFVIQFISLDNVTVDISNGSKNYRLSLVDIEKLI ECCCCCCCEEEEEEECCCEEEEECCCCCCEEEEEEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA