| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696031
Identifier: 126696031
GI number: 126696031
Start: 616236
End: 617621
Strand: Direct
Name: 126696031
Synonym: P9301_06931
Alternate gene names: NA
Gene position: 616236-617621 (Clockwise)
Preceding gene: 126696030
Following gene: 126696032
Centisome position: 37.53
GC content: 24.75
Gene sequence:
>1386_bases ATGAAAAAGAACAAAACATCTACTTTTAAGAAGTTTATAAATAAAATTGGGCAATTTAAATCTATTAATTATCTATCAAA GATAAAATTTACTAAATTAAAATCTTTTTCTTTTCTTTCTGAAATCTCAAAGAGAAAAAGATATAAAAAAATTCTAGAAA AGCTAAATCAATTTAAAGATCTTGAAATTACAAATAAAAAAGAGAAGAATATCAAAAAATCCAACCATGCCAACTCTTCC ATTTTAAAAACAAAGATTTTTAAGAAAATAATTGAAAAAATTAATAAATTAGAAAATCTTAAAATTAAGATCCAAAAATA CAACAAGTCTCACAATTCTGGAAATATTCTGAAACTAGAAACTTTAAGAAATGATTTTCTGGAAGTATTTGATAGGATTA AAAATTATAAATTTTCAGGAAGCAAATTTAAATTAGCAAAAAATAAAAACAACGAAAGATATCAGCAAAAAATTGGTGTT GCATTTTATGGGGACCATAATTTAATTATTGTTAGTGCCAATATTGACTTAAATAATAATATAAAAATAATTGCCTTAAA TGAAATCCCAGTTCCAAGCAATGTGATTGGGGACTCCTTAGTAGAAGATACGAACGAATTGGCCAATATTTTACTGGACT CTCTAACTCTTTTAGAACTTTTAGAATCGCCATTATTATTAGTTTTATCAAGTTCCTTTTTTAATATTCATACTTTCAAT ACCTCTGATTTAAAACAGATTTCACAATCTGACAAAAAGGTTGAATCTAAGAGTCCATATTTACCTGCTAATACACTTGT AGATTTTCTCAGGATGAACGATGTTAAAATTAAAAATGGATTGGTACGAACTATTTATGCAAAAAAGGACTTTATTAAGA GTTGGACAGATACGTTAGAGATAGTTAATTTACCAATAATTGGTTTAGTGCCTGCATCTGTGCATGTATTTGATTCTATA ACTTCAAAAATTACAGAGGAAATTACTGTTTTATTAGATATTGAATCTTCAGAAACAACTTTATTAATAGGAAGTAATTT AGATAGATTAAATTCCTATAAATTACCATTTGGTTATTCCCTATACATCACAGATAATTTAAAAAAATCTAGCAAAAGTT ATTTTGAAAGAGCTTTAAATTCAGTAAAATTAATAATGAAAGATTTAAATCAAGAATTACCTTTAAATATATTTGTAATG GGAAAAGGATTAGATAAATTATTAGATTCTGAAATTAATCTACCAGAAGGTTTTAAATCTATATCTAATTTGAACTTGGC TAATTATTTATATAAACCTCAAACAATGCAAATCCATGAAATAGGTTCTAAATCTATTGAGAATAGTCTCTATTCTTTAA TTTCAATATTGTCATCATGCGTATAA
Upstream 100 bases:
>100_bases GATTTGTGATTCAATTTATTTCATTAGATAATGTAACTGTTGATATCTCAAATGGATCTAAAAATTACAGACTTTCTTTA GTAGATATTGAGAAACTAAT
Downstream 100 bases:
>100_bases AATATAACTTTGCCTTTAAAAATTCCAAATTAAGTCCATGGCAAAGGCCTGCTCCTCCTAATTTACTAGTTACAGATGCC AGCATAGATAAAAAATTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MKKNKTSTFKKFINKIGQFKSINYLSKIKFTKLKSFSFLSEISKRKRYKKILEKLNQFKDLEITNKKEKNIKKSNHANSS ILKTKIFKKIIEKINKLENLKIKIQKYNKSHNSGNILKLETLRNDFLEVFDRIKNYKFSGSKFKLAKNKNNERYQQKIGV AFYGDHNLIIVSANIDLNNNIKIIALNEIPVPSNVIGDSLVEDTNELANILLDSLTLLELLESPLLLVLSSSFFNIHTFN TSDLKQISQSDKKVESKSPYLPANTLVDFLRMNDVKIKNGLVRTIYAKKDFIKSWTDTLEIVNLPIIGLVPASVHVFDSI TSKITEEITVLLDIESSETTLLIGSNLDRLNSYKLPFGYSLYITDNLKKSSKSYFERALNSVKLIMKDLNQELPLNIFVM GKGLDKLLDSEINLPEGFKSISNLNLANYLYKPQTMQIHEIGSKSIENSLYSLISILSSCV
Sequences:
>Translated_461_residues MKKNKTSTFKKFINKIGQFKSINYLSKIKFTKLKSFSFLSEISKRKRYKKILEKLNQFKDLEITNKKEKNIKKSNHANSS ILKTKIFKKIIEKINKLENLKIKIQKYNKSHNSGNILKLETLRNDFLEVFDRIKNYKFSGSKFKLAKNKNNERYQQKIGV AFYGDHNLIIVSANIDLNNNIKIIALNEIPVPSNVIGDSLVEDTNELANILLDSLTLLELLESPLLLVLSSSFFNIHTFN TSDLKQISQSDKKVESKSPYLPANTLVDFLRMNDVKIKNGLVRTIYAKKDFIKSWTDTLEIVNLPIIGLVPASVHVFDSI TSKITEEITVLLDIESSETTLLIGSNLDRLNSYKLPFGYSLYITDNLKKSSKSYFERALNSVKLIMKDLNQELPLNIFVM GKGLDKLLDSEINLPEGFKSISNLNLANYLYKPQTMQIHEIGSKSIENSLYSLISILSSCV >Mature_461_residues MKKNKTSTFKKFINKIGQFKSINYLSKIKFTKLKSFSFLSEISKRKRYKKILEKLNQFKDLEITNKKEKNIKKSNHANSS ILKTKIFKKIIEKINKLENLKIKIQKYNKSHNSGNILKLETLRNDFLEVFDRIKNYKFSGSKFKLAKNKNNERYQQKIGV AFYGDHNLIIVSANIDLNNNIKIIALNEIPVPSNVIGDSLVEDTNELANILLDSLTLLELLESPLLLVLSSSFFNIHTFN TSDLKQISQSDKKVESKSPYLPANTLVDFLRMNDVKIKNGLVRTIYAKKDFIKSWTDTLEIVNLPIIGLVPASVHVFDSI TSKITEEITVLLDIESSETTLLIGSNLDRLNSYKLPFGYSLYITDNLKKSSKSYFERALNSVKLIMKDLNQELPLNIFVM GKGLDKLLDSEINLPEGFKSISNLNLANYLYKPQTMQIHEIGSKSIENSLYSLISILSSCV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52731; Mature: 52731
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNKTSTFKKFINKIGQFKSINYLSKIKFTKLKSFSFLSEISKRKRYKKILEKLNQFKD CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LEITNKKEKNIKKSNHANSSILKTKIFKKIIEKINKLENLKIKIQKYNKSHNSGNILKLE CCCCCCHHHHCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEH TLRNDFLEVFDRIKNYKFSGSKFKLAKNKNNERYQQKIGVAFYGDHNLIIVSANIDLNNN HHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCEEEECCCEEEEEEEECCCCCC IKIIALNEIPVPSNVIGDSLVEDTNELANILLDSLTLLELLESPLLLVLSSSFFNIHTFN EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCCEEEEECC TSDLKQISQSDKKVESKSPYLPANTLVDFLRMNDVKIKNGLVRTIYAKKDFIKSWTDTLE HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEECCCCEEHHHHHHHHHHHHHHHHH IVNLPIIGLVPASVHVFDSITSKITEEITVLLDIESSETTLLIGSNLDRLNSYKLPFGYS HHCCCEEEECCCHHHHHHHHHHHHHHCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEE LYITDNLKKSSKSYFERALNSVKLIMKDLNQELPLNIFVMGKGLDKLLDSEINLPEGFKS EEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCCCCCHHHHH ISNLNLANYLYKPQTMQIHEIGSKSIENSLYSLISILSSCV HHCCCHHHHCCCCCCEEHHHHCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKNKTSTFKKFINKIGQFKSINYLSKIKFTKLKSFSFLSEISKRKRYKKILEKLNQFKD CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LEITNKKEKNIKKSNHANSSILKTKIFKKIIEKINKLENLKIKIQKYNKSHNSGNILKLE CCCCCCHHHHCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEH TLRNDFLEVFDRIKNYKFSGSKFKLAKNKNNERYQQKIGVAFYGDHNLIIVSANIDLNNN HHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCEEEECCCEEEEEEEECCCCCC IKIIALNEIPVPSNVIGDSLVEDTNELANILLDSLTLLELLESPLLLVLSSSFFNIHTFN EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCCEEEEECC TSDLKQISQSDKKVESKSPYLPANTLVDFLRMNDVKIKNGLVRTIYAKKDFIKSWTDTLE HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEECCCCEEHHHHHHHHHHHHHHHHH IVNLPIIGLVPASVHVFDSITSKITEEITVLLDIESSETTLLIGSNLDRLNSYKLPFGYS HHCCCEEEECCCHHHHHHHHHHHHHHCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEE LYITDNLKKSSKSYFERALNSVKLIMKDLNQELPLNIFVMGKGLDKLLDSEINLPEGFKS EEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCCCCCHHHHH ISNLNLANYLYKPQTMQIHEIGSKSIENSLYSLISILSSCV HHCCCHHHHCCCCCCEEHHHHCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA