| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is csoS3
Identifier: 126695917
GI number: 126695917
Start: 507844
End: 509373
Strand: Direct
Name: csoS3
Synonym: P9301_05791
Alternate gene names: NA
Gene position: 507844-509373 (Clockwise)
Preceding gene: 126695916
Following gene: 126695918
Centisome position: 30.93
GC content: 32.81
Gene sequence:
>1530_bases ATGCCTTTAAGAGGACTGGCTAAAGCCAAGAACTTCACATTGGGGCCAACCGCTCCAATGAAAACTTTTACTGAAAATAT ACATATACAAACTAAAGATTCAAATAATTTACGAAATTCTGGAAAGTCTCATAAATTAACCAATAATATTCAAAATGAAA ATCTATTTAGGTATGAAAGCAAAATAAAAAGTGATTTTGACGAAATTGTTCCAACTCTCAAGGAAATTGCCCGAATTCAA CATCACGAAGATTTTATAAATAAAGCTCAGAAAATATCAAGAAAAAATTTGGGAATAGATTTACCCCTCCATGTATTAGA TAAATCTTGGGTTAAACCTCTTGATATGAGGGCTTTATATGCATGGTGTGCTTTCAAACAGCATGATAAACTTAGCGACA ATTTTTTTAATAATGATCCACTTGAAGGTGCTGCTGGAAGTAGGGATGCGGAAGACTTTGAAAAATTTCTCTTAGATTGT GGAATACATTTACTTGATATAACTCCTTGTTCAGATGGAAGATTAGCTCATTCAGTTGCTTATGTAATGAGAATACCTTT TAGTTCAGTAAGAAGAAGATCTCATGCTGGAGCACTGTTTGATATTGAAAATACCGTTAATCGATGGGTAAAAACTGAAC ATAAAAGATATAGAGAGAATGTTCCTAATGAAGCTCATAAAGATACCAGGTACTTAAAAGTTGTAACTTATCATTTCAGT TCAGTAGATCCTTTGCATCAGGGATGCGCAGCTCATGGGAGTAATGACAAGTTAGCTGCAGCAGAAGGTAGAAATAAATT ATATGCTTTCAAAGAGGCTGTAGAGAATAGCTTTTGCTGCGGAGCTTCTGTGGATTTAATGTTAATTGGACTTGATACAG ACACTGATTCATTAAAAATACATTTATCAACTAGTGATGGCGGTATAGATTTAGAAAAAACCATTTCTACATTAGAAATT TATAATTCAACAATAAATTTTTCAAAAGAGGATGCAGAGAGAGAAATTTGCCAGACAATTTCTAAGCAATCTTCAAAAGA TAAACTTAGTGGACTGGAAAAATTTACGTATAAATTAATTGTCAATAATATTTCTCAAATTGATTATGTTAAGAGTTTTC ATAATGGTTCTTATGAAGATATTGGACATGCAGAGAGGTTTATTGGAGTAGGCATAGGTTTCAAAGAAGTACATCTCAGG AATTTAACTTATTTTGCTCATTTAGATACAGTCGAAGAAGGTGCTCCAGATTTAGATGTAGGAGTGAAGATTTTTACTGG ATTAAATGTTTCTCAAGATCTACCTATTCCGGTAGTGATAAGATTTGATTACTCTGGAAAAGTTCCCGGAGCAAAAGAGA GGGCAATAAATGATTGTGAAAGAGTTAATAATGCGATATCAATTAGATATAAAAATTTAGTTGATCAAGGTTTGTTACAT ACTTGCTCTACTATTAGAGATAGGGACAACATTCATTCCGCCCAAATTATTGGAATGTCTTTAGATAAAAAAACAGAGGA GGCTCACTAA
Upstream 100 bases:
>100_bases GAAACAGAAAAACCAGATTTCTTGATAACCGGATCTAGTGGTAATACTCGTGAGGGACAACTTGTTACCTTTTCAGGTGG TGCAAGAGGTTAACTAAATA
Downstream 100 bases:
>100_bases TTATGTTAATTTGCAAGGTTGTAAAACCACTTGTCTCAACCAATAGGATTCCTGGTTTTGAACATAAACATCTGCAGGTT GTATTAGATGGATCTTCTAA
Product: carboxysome shell protein CsoS3
Products: NA
Alternate protein names: Carboxysome Shell; Carboxysome Peptide; Carboxysome Shell Carbonic Anhydrase Epsilon
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MPLRGLAKAKNFTLGPTAPMKTFTENIHIQTKDSNNLRNSGKSHKLTNNIQNENLFRYESKIKSDFDEIVPTLKEIARIQ HHEDFINKAQKISRKNLGIDLPLHVLDKSWVKPLDMRALYAWCAFKQHDKLSDNFFNNDPLEGAAGSRDAEDFEKFLLDC GIHLLDITPCSDGRLAHSVAYVMRIPFSSVRRRSHAGALFDIENTVNRWVKTEHKRYRENVPNEAHKDTRYLKVVTYHFS SVDPLHQGCAAHGSNDKLAAAEGRNKLYAFKEAVENSFCCGASVDLMLIGLDTDTDSLKIHLSTSDGGIDLEKTISTLEI YNSTINFSKEDAEREICQTISKQSSKDKLSGLEKFTYKLIVNNISQIDYVKSFHNGSYEDIGHAERFIGVGIGFKEVHLR NLTYFAHLDTVEEGAPDLDVGVKIFTGLNVSQDLPIPVVIRFDYSGKVPGAKERAINDCERVNNAISIRYKNLVDQGLLH TCSTIRDRDNIHSAQIIGMSLDKKTEEAH
Sequences:
>Translated_509_residues MPLRGLAKAKNFTLGPTAPMKTFTENIHIQTKDSNNLRNSGKSHKLTNNIQNENLFRYESKIKSDFDEIVPTLKEIARIQ HHEDFINKAQKISRKNLGIDLPLHVLDKSWVKPLDMRALYAWCAFKQHDKLSDNFFNNDPLEGAAGSRDAEDFEKFLLDC GIHLLDITPCSDGRLAHSVAYVMRIPFSSVRRRSHAGALFDIENTVNRWVKTEHKRYRENVPNEAHKDTRYLKVVTYHFS SVDPLHQGCAAHGSNDKLAAAEGRNKLYAFKEAVENSFCCGASVDLMLIGLDTDTDSLKIHLSTSDGGIDLEKTISTLEI YNSTINFSKEDAEREICQTISKQSSKDKLSGLEKFTYKLIVNNISQIDYVKSFHNGSYEDIGHAERFIGVGIGFKEVHLR NLTYFAHLDTVEEGAPDLDVGVKIFTGLNVSQDLPIPVVIRFDYSGKVPGAKERAINDCERVNNAISIRYKNLVDQGLLH TCSTIRDRDNIHSAQIIGMSLDKKTEEAH >Mature_508_residues PLRGLAKAKNFTLGPTAPMKTFTENIHIQTKDSNNLRNSGKSHKLTNNIQNENLFRYESKIKSDFDEIVPTLKEIARIQH HEDFINKAQKISRKNLGIDLPLHVLDKSWVKPLDMRALYAWCAFKQHDKLSDNFFNNDPLEGAAGSRDAEDFEKFLLDCG IHLLDITPCSDGRLAHSVAYVMRIPFSSVRRRSHAGALFDIENTVNRWVKTEHKRYRENVPNEAHKDTRYLKVVTYHFSS VDPLHQGCAAHGSNDKLAAAEGRNKLYAFKEAVENSFCCGASVDLMLIGLDTDTDSLKIHLSTSDGGIDLEKTISTLEIY NSTINFSKEDAEREICQTISKQSSKDKLSGLEKFTYKLIVNNISQIDYVKSFHNGSYEDIGHAERFIGVGIGFKEVHLRN LTYFAHLDTVEEGAPDLDVGVKIFTGLNVSQDLPIPVVIRFDYSGKVPGAKERAINDCERVNNAISIRYKNLVDQGLLHT CSTIRDRDNIHSAQIIGMSLDKKTEEAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57424; Mature: 57293
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLRGLAKAKNFTLGPTAPMKTFTENIHIQTKDSNNLRNSGKSHKLTNNIQNENLFRYES CCCCCCCCCCCCCCCCCCCHHHHCCCEEEEECCCCCHHCCCCCCHHHCCCCCCCHHHHHH KIKSDFDEIVPTLKEIARIQHHEDFINKAQKISRKNLGIDLPLHVLDKSWVKPLDMRALY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHH AWCAFKQHDKLSDNFFNNDPLEGAAGSRDAEDFEKFLLDCGIHLLDITPCSDGRLAHSVA HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHH YVMRIPFSSVRRRSHAGALFDIENTVNRWVKTEHKRYRENVPNEAHKDTRYLKVVTYHFS HHHHCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEEECC SVDPLHQGCAAHGSNDKLAAAEGRNKLYAFKEAVENSFCCGASVDLMLIGLDTDTDSLKI CCCHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEE HLSTSDGGIDLEKTISTLEIYNSTINFSKEDAEREICQTISKQSSKDKLSGLEKFTYKLI EEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VNNISQIDYVKSFHNGSYEDIGHAERFIGVGIGFKEVHLRNLTYFAHLDTVEEGAPDLDV HHHHHHHHHHHHHCCCCCHHHCHHHHHHCCCCCHHHHHHHCEEEEEEECHHHCCCCCCCC GVKIFTGLNVSQDLPIPVVIRFDYSGKVPGAKERAINDCERVNNAISIRYKNLVDQGLLH CEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH TCSTIRDRDNIHSAQIIGMSLDKKTEEAH HHHHHHHCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure PLRGLAKAKNFTLGPTAPMKTFTENIHIQTKDSNNLRNSGKSHKLTNNIQNENLFRYES CCCCCCCCCCCCCCCCCCHHHHCCCEEEEECCCCCHHCCCCCCHHHCCCCCCCHHHHHH KIKSDFDEIVPTLKEIARIQHHEDFINKAQKISRKNLGIDLPLHVLDKSWVKPLDMRALY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHH AWCAFKQHDKLSDNFFNNDPLEGAAGSRDAEDFEKFLLDCGIHLLDITPCSDGRLAHSVA HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHH YVMRIPFSSVRRRSHAGALFDIENTVNRWVKTEHKRYRENVPNEAHKDTRYLKVVTYHFS HHHHCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEEECC SVDPLHQGCAAHGSNDKLAAAEGRNKLYAFKEAVENSFCCGASVDLMLIGLDTDTDSLKI CCCHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEE HLSTSDGGIDLEKTISTLEIYNSTINFSKEDAEREICQTISKQSSKDKLSGLEKFTYKLI EEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VNNISQIDYVKSFHNGSYEDIGHAERFIGVGIGFKEVHLRNLTYFAHLDTVEEGAPDLDV HHHHHHHHHHHHHCCCCCHHHCHHHHHHCCCCCHHHHHHHCEEEEEEECHHHCCCCCCCC GVKIFTGLNVSQDLPIPVVIRFDYSGKVPGAKERAINDCERVNNAISIRYKNLVDQGLLH CEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH TCSTIRDRDNIHSAQIIGMSLDKKTEEAH HHHHHHHCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA