| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is csoS2
Identifier: 126695916
GI number: 126695916
Start: 505542
End: 507836
Strand: Direct
Name: csoS2
Synonym: P9301_05781
Alternate gene names: NA
Gene position: 505542-507836 (Clockwise)
Preceding gene: 126695915
Following gene: 126695917
Centisome position: 30.79
GC content: 37.69
Gene sequence:
>2295_bases ATGTCAAAAAAAACCAGTAGAGAGATTGCACTTGAAAGAAGAAAGGCGATGAGTGATAGCGGTAAAAAAGCTGCTGCTTA TTCTTCAACTACCAAAGATAGAGTTAGATCTTCTCAAGATATAAATATTTCTGGGACTCAGTCTTCTCCTAATAATCATA ATATTTCAAAACCAGCTACAAAACATATTCCAAAAACTCAAGTAAACAGAAATTCTTCAACAAGTTTATCTAGTAAAGAG TTAGTAATAGAGAGAAGAAAAGCAATGTCTACCCATGGAAAATCAGCTATAACTTCATCCGATAGAACACGTACTGATGT TAAAAAAGAAAGTCCTGTAAACATAGTTAATTCAACTATAAATAAAAATCAAGAAAGTCAGGATTCAACTAGTACAGGAT CTAAGTCCCTCAAACCCAGCGTTAAGAGAAGAATTAATCAGAAGAGAAAGCCTATTACTAATACAAGTAGAGATATTGTT TTAGCGAGAAGAGAAGCTCAATCTAAGCATGGTAAATCAGCAACTAAACAAAATACCAGTGCCGCTTCTTTGGCTAGAAG GGGTGATCCAGATTTAAGTAGTAGAGAAATTTCTCAAAGAGTGAGAGAGTTAAGAAGTAAAACTGGTGCTACAGGCAAAA AAGGTAATGGTAAATGTAGACCATGTGGTCCAAATAAAAATGGCTCCAAACAAAATATTGCAGATGCTAGCTGGAAAGTT GGTAAAAGTGAAACTGATTCAGGTCAAATAGTGACTGGAACACAAGCCAATAGATCTGTAAAAACTACAGGTAATGAAGC AAGTACATGTAGAACAGTTACAGGCACCCAATACATGGGAGCGGAAGTTGTTGATCAATTTTGTCAAGATAGACCAAGTT ATAAACAACCACTTAGATCTACTGTTACTGCAACAACATCAGGGAATAAAGTGACTGGGAATGAAGTTGGTAGATCTGAT AGGGTCACAGGCGATGAGCCAGGGACTTGTAAAAACCTTACAGGTACTGAATATGTATCTTCTAATCAATCACAGAAGTA TTGTGGTGATGTTCCAAAAAATCCTTCAAAGGTTAAACACAGTACTACAACCGATGGATTAAAAGTATCTGGATCACTTC CTGGTAGATCAACCTTAGTTACTGGAGATGAATCAGGTTCTGGACATCAGTTAACTGGAGATCAATATCTTGGTTCTGAG CCAAATCCAAAAGGCAAAGCATTTGAAAAAGTAGGTAGCTACAACACTCTTAATGGGAGTAATGTAACTGGTACAGGGGT TGGAAGATCAGACCATATGACAGGCAATGAACATGGGAGTTGTAAGAATGTAACCGGCGATGAGTATATAGGATCTCAAC AATACGAGAAGTTTTGCGGTTCAAAACCAAAACCAGAAGCTAGAAAAGTAGGTTTAAGCCTTTCTTCAAAGTCAAATTTA ATAAGCGGCACTATGACGGGAAGATCAGAAATAGTAACTGGAGATGAACCAGGTTCATGCAAAGTGTTAACAGGAACACC ATACGCAGGCTTAGATCAGATTAAAGAGAATTGTAATACTGAAACTTCTGAAGATATGAAATCAAGAGCAACAGTTAATT CTGGAAATAATTCAAATGCCAGACTTACAGGACAACAACCAGGAATTGGCGGAGTAATGACAGGTGCTAAGAAAGGTGCT TGTAAAAACCTAACAGGGACTCCTTATGTTGGTGGAGATCAGTTCTCACAAGCTTGTGATAATCCTCCAAATGATACTGC TTATGCTAATCCGGAAAAATCAGCAGGTAACACTTGGAACGAATTCTCTGTTAAATCACCATCAAGAGATAAATATTCTG AAAAAAATACTCAAGGTGTTACTGGCAATGAATATGAAAATGGTTCAAAGGTAACAGGACCTTTTGATATGGCAGTTGAT AAGGTCACTGGTACTGAAAAATTTAGATTTGAACCGAATAAAAATATTACTTATAAACAAAAAATGGAAATTGAAGAGGC AGACCGTGCTGCAAAGACACCAGAAAAAAGAGTCGCATCAAGGATTACTGGTGAAGGACAATCAGTGGGAAACGTAACTG GTGATGATTGGGATCGCGGTGATAAGGTCACAGGCACAGAGGGAGCTTCTTCTAGGAAGCGAAATCCATCAAGAGCAGGA TTCATGAGTGCAATGCCCCCTATGGAAATAAAAAGAAATGAGGAAACAGAAAAACCAGATTTCTTGATAACCGGATCTAG TGGTAATACTCGTGAGGGACAACTTGTTACCTTTTCAGGTGGTGCAAGAGGTTAA
Upstream 100 bases:
>100_bases GGACGTTAAAGCTACTTATCGTAGTTAATATCTTTCTCCAAAAAAATTTTTGGAGAAAGTTTTTCAAAAAAGTTTTTAAA GAATTTCAAACTTGAAGATT
Downstream 100 bases:
>100_bases CTAAATAATGCCTTTAAGAGGACTGGCTAAAGCCAAGAACTTCACATTGGGGCCAACCGCTCCAATGAAAACTTTTACTG AAAATATACATATACAAACT
Product: carboxysome shell protein CsoS2
Products: NA
Alternate protein names: Carboxysome; Tat Pathway Signal Sequence Domain Protein
Number of amino acids: Translated: 764; Mature: 763
Protein sequence:
>764_residues MSKKTSREIALERRKAMSDSGKKAAAYSSTTKDRVRSSQDINISGTQSSPNNHNISKPATKHIPKTQVNRNSSTSLSSKE LVIERRKAMSTHGKSAITSSDRTRTDVKKESPVNIVNSTINKNQESQDSTSTGSKSLKPSVKRRINQKRKPITNTSRDIV LARREAQSKHGKSATKQNTSAASLARRGDPDLSSREISQRVRELRSKTGATGKKGNGKCRPCGPNKNGSKQNIADASWKV GKSETDSGQIVTGTQANRSVKTTGNEASTCRTVTGTQYMGAEVVDQFCQDRPSYKQPLRSTVTATTSGNKVTGNEVGRSD RVTGDEPGTCKNLTGTEYVSSNQSQKYCGDVPKNPSKVKHSTTTDGLKVSGSLPGRSTLVTGDESGSGHQLTGDQYLGSE PNPKGKAFEKVGSYNTLNGSNVTGTGVGRSDHMTGNEHGSCKNVTGDEYIGSQQYEKFCGSKPKPEARKVGLSLSSKSNL ISGTMTGRSEIVTGDEPGSCKVLTGTPYAGLDQIKENCNTETSEDMKSRATVNSGNNSNARLTGQQPGIGGVMTGAKKGA CKNLTGTPYVGGDQFSQACDNPPNDTAYANPEKSAGNTWNEFSVKSPSRDKYSEKNTQGVTGNEYENGSKVTGPFDMAVD KVTGTEKFRFEPNKNITYKQKMEIEEADRAAKTPEKRVASRITGEGQSVGNVTGDDWDRGDKVTGTEGASSRKRNPSRAG FMSAMPPMEIKRNEETEKPDFLITGSSGNTREGQLVTFSGGARG
Sequences:
>Translated_764_residues MSKKTSREIALERRKAMSDSGKKAAAYSSTTKDRVRSSQDINISGTQSSPNNHNISKPATKHIPKTQVNRNSSTSLSSKE LVIERRKAMSTHGKSAITSSDRTRTDVKKESPVNIVNSTINKNQESQDSTSTGSKSLKPSVKRRINQKRKPITNTSRDIV LARREAQSKHGKSATKQNTSAASLARRGDPDLSSREISQRVRELRSKTGATGKKGNGKCRPCGPNKNGSKQNIADASWKV GKSETDSGQIVTGTQANRSVKTTGNEASTCRTVTGTQYMGAEVVDQFCQDRPSYKQPLRSTVTATTSGNKVTGNEVGRSD RVTGDEPGTCKNLTGTEYVSSNQSQKYCGDVPKNPSKVKHSTTTDGLKVSGSLPGRSTLVTGDESGSGHQLTGDQYLGSE PNPKGKAFEKVGSYNTLNGSNVTGTGVGRSDHMTGNEHGSCKNVTGDEYIGSQQYEKFCGSKPKPEARKVGLSLSSKSNL ISGTMTGRSEIVTGDEPGSCKVLTGTPYAGLDQIKENCNTETSEDMKSRATVNSGNNSNARLTGQQPGIGGVMTGAKKGA CKNLTGTPYVGGDQFSQACDNPPNDTAYANPEKSAGNTWNEFSVKSPSRDKYSEKNTQGVTGNEYENGSKVTGPFDMAVD KVTGTEKFRFEPNKNITYKQKMEIEEADRAAKTPEKRVASRITGEGQSVGNVTGDDWDRGDKVTGTEGASSRKRNPSRAG FMSAMPPMEIKRNEETEKPDFLITGSSGNTREGQLVTFSGGARG >Mature_763_residues SKKTSREIALERRKAMSDSGKKAAAYSSTTKDRVRSSQDINISGTQSSPNNHNISKPATKHIPKTQVNRNSSTSLSSKEL VIERRKAMSTHGKSAITSSDRTRTDVKKESPVNIVNSTINKNQESQDSTSTGSKSLKPSVKRRINQKRKPITNTSRDIVL ARREAQSKHGKSATKQNTSAASLARRGDPDLSSREISQRVRELRSKTGATGKKGNGKCRPCGPNKNGSKQNIADASWKVG KSETDSGQIVTGTQANRSVKTTGNEASTCRTVTGTQYMGAEVVDQFCQDRPSYKQPLRSTVTATTSGNKVTGNEVGRSDR VTGDEPGTCKNLTGTEYVSSNQSQKYCGDVPKNPSKVKHSTTTDGLKVSGSLPGRSTLVTGDESGSGHQLTGDQYLGSEP NPKGKAFEKVGSYNTLNGSNVTGTGVGRSDHMTGNEHGSCKNVTGDEYIGSQQYEKFCGSKPKPEARKVGLSLSSKSNLI SGTMTGRSEIVTGDEPGSCKVLTGTPYAGLDQIKENCNTETSEDMKSRATVNSGNNSNARLTGQQPGIGGVMTGAKKGAC KNLTGTPYVGGDQFSQACDNPPNDTAYANPEKSAGNTWNEFSVKSPSRDKYSEKNTQGVTGNEYENGSKVTGPFDMAVDK VTGTEKFRFEPNKNITYKQKMEIEEADRAAKTPEKRVASRITGEGQSVGNVTGDDWDRGDKVTGTEGASSRKRNPSRAGF MSAMPPMEIKRNEETEKPDFLITGSSGNTREGQLVTFSGGARG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81739; Mature: 81608
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKTSREIALERRKAMSDSGKKAAAYSSTTKDRVRSSQDINISGTQSSPNNHNISKPAT CCCCHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCHH KHIPKTQVNRNSSTSLSSKELVIERRKAMSTHGKSAITSSDRTRTDVKKESPVNIVNSTI HCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCHHHHCCCCCCHHHHHHHH NKNQESQDSTSTGSKSLKPSVKRRINQKRKPITNTSRDIVLARREAQSKHGKSATKQNTS CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHCCCHHHCCCH AASLARRGDPDLSSREISQRVRELRSKTGATGKKGNGKCRPCGPNKNGSKQNIADASWKV HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GKSETDSGQIVTGTQANRSVKTTGNEASTCRTVTGTQYMGAEVVDQFCQDRPSYKQPLRS CCCCCCCCCEEECCCCCCEEECCCCCCCCEEEECCCHHHCHHHHHHHHHCCCCHHHHHHH TVTATTSGNKVTGNEVGRSDRVTGDEPGTCKNLTGTEYVSSNQSQKYCGDVPKNPSKVKH HEEEECCCCEECCHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHCCCCCCCHHHCCC STTTDGLKVSGSLPGRSTLVTGDESGSGHQLTGDQYLGSEPNPKGKAFEKVGSYNTLNGS CCCCCCEEEECCCCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCHHHHHHCCCCCCCCC NVTGTGVGRSDHMTGNEHGSCKNVTGDEYIGSQQYEKFCGSKPKPEARKVGLSLSSKSNL CCEECCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCHHHHHCCEECCCCCE ISGTMTGRSEIVTGDEPGSCKVLTGTPYAGLDQIKENCNTETSEDMKSRATVNSGNNSNA EEEECCCCCEEEECCCCCCEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHEECCCCCCCC RLTGQQPGIGGVMTGAKKGACKNLTGTPYVGGDQFSQACDNPPNDTAYANPEKSAGNTWN EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC EFSVKSPSRDKYSEKNTQGVTGNEYENGSKVTGPFDMAVDKVTGTEKFRFEPNKNITYKQ CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCHH KMEIEEADRAAKTPEKRVASRITGEGQSVGNVTGDDWDRGDKVTGTEGASSRKRNPSRAG HCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH FMSAMPPMEIKRNEETEKPDFLITGSSGNTREGQLVTFSGGARG HHHCCCCHHHCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCC >Mature Secondary Structure SKKTSREIALERRKAMSDSGKKAAAYSSTTKDRVRSSQDINISGTQSSPNNHNISKPAT CCCHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCHH KHIPKTQVNRNSSTSLSSKELVIERRKAMSTHGKSAITSSDRTRTDVKKESPVNIVNSTI HCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCHHHHCCCCCCHHHHHHHH NKNQESQDSTSTGSKSLKPSVKRRINQKRKPITNTSRDIVLARREAQSKHGKSATKQNTS CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHCCCHHHCCCH AASLARRGDPDLSSREISQRVRELRSKTGATGKKGNGKCRPCGPNKNGSKQNIADASWKV HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GKSETDSGQIVTGTQANRSVKTTGNEASTCRTVTGTQYMGAEVVDQFCQDRPSYKQPLRS CCCCCCCCCEEECCCCCCEEECCCCCCCCEEEECCCHHHCHHHHHHHHHCCCCHHHHHHH TVTATTSGNKVTGNEVGRSDRVTGDEPGTCKNLTGTEYVSSNQSQKYCGDVPKNPSKVKH HEEEECCCCEECCHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHCCCCCCCHHHCCC STTTDGLKVSGSLPGRSTLVTGDESGSGHQLTGDQYLGSEPNPKGKAFEKVGSYNTLNGS CCCCCCEEEECCCCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCHHHHHHCCCCCCCCC NVTGTGVGRSDHMTGNEHGSCKNVTGDEYIGSQQYEKFCGSKPKPEARKVGLSLSSKSNL CCEECCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCHHHHHCCEECCCCCE ISGTMTGRSEIVTGDEPGSCKVLTGTPYAGLDQIKENCNTETSEDMKSRATVNSGNNSNA EEEECCCCCEEEECCCCCCEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHEECCCCCCCC RLTGQQPGIGGVMTGAKKGACKNLTGTPYVGGDQFSQACDNPPNDTAYANPEKSAGNTWN EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC EFSVKSPSRDKYSEKNTQGVTGNEYENGSKVTGPFDMAVDKVTGTEKFRFEPNKNITYKQ CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCHH KMEIEEADRAAKTPEKRVASRITGEGQSVGNVTGDDWDRGDKVTGTEGASSRKRNPSRAG HCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH FMSAMPPMEIKRNEETEKPDFLITGSSGNTREGQLVTFSGGARG HHHCCCCHHHCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA