| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is hemH
Identifier: 126695889
GI number: 126695889
Start: 480716
End: 481891
Strand: Direct
Name: hemH
Synonym: P9301_05511
Alternate gene names: 126695889
Gene position: 480716-481891 (Clockwise)
Preceding gene: 126695883
Following gene: 126695890
Centisome position: 29.28
GC content: 37.07
Gene sequence:
>1176_bases ATGGTTAAAATAGGCGTCTTACTAATGAATTTAGGAGGGCCTGAACGCATTACTGATGTCGGCCCATTCTTATACAATCT TTTTTCTGATCCAGAAATTATCAGGACACCTTTCCCTGTTTTTCAAAAGCCCCTAGCTTGGTTAATTAGCACGCTTAGGA GTACTACATCACAACAGGCCTACCTTTCCATAGGTGGAGGTTCACCTATCAGAAGGATAACTGAACAACAAGCAAGAGAA TTACAATCTAAATTAAGGGAAAAGGGATTTAATGCTACTACCTACATTGCTATGAGGTATTGGCATCCTTTTACCGAATC AGCAATTGCTGATATGAAAGCAGATGGCATAGATCAAGTTGTTGTAATACCCTTGTATCCGCATTTTTCGATAAGTACTA GTGGTTCGAGCTTTAGAGAATTAAAAAAATTGAGAGATTCTGATGATGAATTTAAGAAGGTTCCAATGAGATGTGTAAGG AGTTGGTTCAGTCAATCAGGTTATTTAAAGTCTATGGTTGAATTAATTTCTGAACAAATTTCACTTTGTGAATCACCTTC AAAAGCCCATATATTTTTCACTGCTCATGGAGTTCCTAAGAGTTACGTAGAGGAAGCTGGAGACCCTTACAAACAACAAA TTGAAGATTGTTCCTTATTAATAATAAATGAGTTGGAAAAATGTTTAGGGTATAGTAACCCTCATACTCTCTCTTACCAG AGTAGAGTTGGTCCTGTTGAATGGTTGAAACCTTATACAGAAGAGGTATTGGCGGATCTTGGAAGGTCAAATGTTAATGA TCTAGTTGTGGTTCCTATAAGTTTCGTTGGAGAGCATATCGAAACGTTGCAAGAAATTGATATTGAATATAAAGAAATTG CTGAAAAAGCTGGTATTAAAAACTTTCGGAGAGTTAAGGCTCTTAATACCCATCCTACTTTTATTGAAGGTCTTAGTGAT CTAGTGATTTCCTGCTTGGAAGGGCCTCTAGTTAATATTGAGGAGGCTTCTCAGTTGCCTGAAAAAGTTAAACTTTATCC TCAGGAGAAGTGGCAATGGGGTTGGAATAATAGTTCAGAGGTGTGGAACGGAAGGGTTGCAATGATTATTTTTCTTGTGC TTTTTATTGAACTTATTTCAGGCTCTGGACCTCTACATAAATTAGGCATCTTATAA
Upstream 100 bases:
>100_bases TCATTGACATTATTAATTTCCTGAATTACGTTCATTTACTTATATAATTGACCATATAATGACGTTTTTAATGTTGATTT TCAATCTCCATAAATCTTAA
Downstream 100 bases:
>100_bases GGAAAAATTGATATTCATTTGAAAATTTTAAATTTTTTAAAAGATTTTTTTTGAATATATTTCTGACATTACATTTCTAA ATGAGGCAAAAGTATTTAAT
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MVKIGVLLMNLGGPERITDVGPFLYNLFSDPEIIRTPFPVFQKPLAWLISTLRSTTSQQAYLSIGGGSPIRRITEQQARE LQSKLREKGFNATTYIAMRYWHPFTESAIADMKADGIDQVVVIPLYPHFSISTSGSSFRELKKLRDSDDEFKKVPMRCVR SWFSQSGYLKSMVELISEQISLCESPSKAHIFFTAHGVPKSYVEEAGDPYKQQIEDCSLLIINELEKCLGYSNPHTLSYQ SRVGPVEWLKPYTEEVLADLGRSNVNDLVVVPISFVGEHIETLQEIDIEYKEIAEKAGIKNFRRVKALNTHPTFIEGLSD LVISCLEGPLVNIEEASQLPEKVKLYPQEKWQWGWNNSSEVWNGRVAMIIFLVLFIELISGSGPLHKLGIL
Sequences:
>Translated_391_residues MVKIGVLLMNLGGPERITDVGPFLYNLFSDPEIIRTPFPVFQKPLAWLISTLRSTTSQQAYLSIGGGSPIRRITEQQARE LQSKLREKGFNATTYIAMRYWHPFTESAIADMKADGIDQVVVIPLYPHFSISTSGSSFRELKKLRDSDDEFKKVPMRCVR SWFSQSGYLKSMVELISEQISLCESPSKAHIFFTAHGVPKSYVEEAGDPYKQQIEDCSLLIINELEKCLGYSNPHTLSYQ SRVGPVEWLKPYTEEVLADLGRSNVNDLVVVPISFVGEHIETLQEIDIEYKEIAEKAGIKNFRRVKALNTHPTFIEGLSD LVISCLEGPLVNIEEASQLPEKVKLYPQEKWQWGWNNSSEVWNGRVAMIIFLVLFIELISGSGPLHKLGIL >Mature_391_residues MVKIGVLLMNLGGPERITDVGPFLYNLFSDPEIIRTPFPVFQKPLAWLISTLRSTTSQQAYLSIGGGSPIRRITEQQARE LQSKLREKGFNATTYIAMRYWHPFTESAIADMKADGIDQVVVIPLYPHFSISTSGSSFRELKKLRDSDDEFKKVPMRCVR SWFSQSGYLKSMVELISEQISLCESPSKAHIFFTAHGVPKSYVEEAGDPYKQQIEDCSLLIINELEKCLGYSNPHTLSYQ SRVGPVEWLKPYTEEVLADLGRSNVNDLVVVPISFVGEHIETLQEIDIEYKEIAEKAGIKNFRRVKALNTHPTFIEGLSD LVISCLEGPLVNIEEASQLPEKVKLYPQEKWQWGWNNSSEVWNGRVAMIIFLVLFIELISGSGPLHKLGIL
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family
Homologues:
Organism=Homo sapiens, GI60499021, Length=331, Percent_Identity=35.3474320241692, Blast_Score=190, Evalue=1e-48, Organism=Homo sapiens, GI60499025, Length=331, Percent_Identity=35.3474320241692, Blast_Score=190, Evalue=2e-48, Organism=Escherichia coli, GI1786681, Length=328, Percent_Identity=30.7926829268293, Blast_Score=132, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6324750, Length=345, Percent_Identity=35.9420289855072, Blast_Score=194, Evalue=2e-50, Organism=Drosophila melanogaster, GI17864156, Length=331, Percent_Identity=32.02416918429, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24651774, Length=260, Percent_Identity=29.6153846153846, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI45552018, Length=139, Percent_Identity=39.568345323741, Blast_Score=111, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEMH_PROM0 (A3PBP9)
Other databases:
- EMBL: CP000576 - RefSeq: YP_001090775.1 - ProteinModelPortal: A3PBP9 - SMR: A3PBP9 - STRING: A3PBP9 - GeneID: 4912160 - GenomeReviews: CP000576_GR - KEGG: pmg:P9301_05511 - eggNOG: COG0276 - HOGENOM: HBG697135 - OMA: WLQKPLA - ProtClustDB: PRK00035 - BioCyc: PMAR167546:P9301ORF_0564-MONOMER - GO: GO:0005737 - HAMAP: MF_00323 - InterPro: IPR001015 - InterPro: IPR019772 - PANTHER: PTHR11108 - TIGRFAMs: TIGR00109
Pfam domain/function: PF00762 Ferrochelatase
EC number: =4.99.1.1
Molecular weight: Translated: 44229; Mature: 44229
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKIGVLLMNLGGPERITDVGPFLYNLFSDPEIIRTPFPVFQKPLAWLISTLRSTTSQQA CEEEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCE YLSIGGGSPIRRITEQQARELQSKLREKGFNATTYIAMRYWHPFTESAIADMKADGIDQV EEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEHHCCCHHHHHHHHHCCCCCCCE VVIPLYPHFSISTSGSSFRELKKLRDSDDEFKKVPMRCVRSWFSQSGYLKSMVELISEQI EEEEECCCCEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SLCESPSKAHIFFTAHGVPKSYVEEAGDPYKQQIEDCSLLIINELEKCLGYSNPHTLSYQ HHHCCCCCEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH SRVGPVEWLKPYTEEVLADLGRSNVNDLVVVPISFVGEHIETLQEIDIEYKEIAEKAGIK HCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHCCH NFRRVKALNTHPTFIEGLSDLVISCLEGPLVNIEEASQLPEKVKLYPQEKWQWGWNNSSE HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHCCCCCHHCCCCCCCCCH VWNGRVAMIIFLVLFIELISGSGPLHKLGIL HHCCHHHHHHHHHHHHHHHCCCCCCHHCCCC >Mature Secondary Structure MVKIGVLLMNLGGPERITDVGPFLYNLFSDPEIIRTPFPVFQKPLAWLISTLRSTTSQQA CEEEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCE YLSIGGGSPIRRITEQQARELQSKLREKGFNATTYIAMRYWHPFTESAIADMKADGIDQV EEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEHHCCCHHHHHHHHHCCCCCCCE VVIPLYPHFSISTSGSSFRELKKLRDSDDEFKKVPMRCVRSWFSQSGYLKSMVELISEQI EEEEECCCCEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SLCESPSKAHIFFTAHGVPKSYVEEAGDPYKQQIEDCSLLIINELEKCLGYSNPHTLSYQ HHHCCCCCEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH SRVGPVEWLKPYTEEVLADLGRSNVNDLVVVPISFVGEHIETLQEIDIEYKEIAEKAGIK HCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHCCH NFRRVKALNTHPTFIEGLSDLVISCLEGPLVNIEEASQLPEKVKLYPQEKWQWGWNNSSE HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHCCCCCHHCCCCCCCCCH VWNGRVAMIIFLVLFIELISGSGPLHKLGIL HHCCHHHHHHHHHHHHHHHCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA