| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is ilvB [H]
Identifier: 126695890
GI number: 126695890
Start: 482029
End: 483792
Strand: Direct
Name: ilvB [H]
Synonym: P9301_05521
Alternate gene names: 126695890
Gene position: 482029-483792 (Clockwise)
Preceding gene: 126695889
Following gene: 126695891
Centisome position: 29.36
GC content: 36.73
Gene sequence:
>1764_bases GTGACCCTTACTTCGAGATCCTTTTCACAGGGTAGTTCAAAACATGAAAATCCAGTTTGGATAACTGGTGCAGATGCACT AATGGATTCTTTAAAAATTCATGGAGTAAAAGTTATATTTGGATATCCTGGCGGAGCCATATTACCAATATACGACGCTG TTCATAAGGCAGAACAAGATGGTTGGTTAAAACACTATATGGTTCGGCATGAACAAGGTGGTTCACATGCGGCTGATGGA TATGCAAGATCTACTGGTGAAGTAGGAGTATGTTTTGGAACCTCAGGCCCAGGTGCAACAAATTTGGTAACTGGAATTGC TACTGCGCAAATGGATTCAGTCCCTCTAGTTGTAGTTACAGGTCAAGTCCCAAGACCTGCTATAGGAACAGATGCTTTTC AAGAAACTGATATTTTTGGTATAACTCTTCCAATAGTGAAACATTCATGGGTAATAAGGGATCCTTCAGATATCGCGAAA GTAGTTTCTGAAGCTTTTTTTATAGCCTCATCTGGAAGGCCTGGCCCTGTTTTAATTGATATACCCAAAGATGTAGGTCA GGAGTTCTTTAATTACCAAAGAGTTTTGCCAGGTGAGATTATTCCAAAAGGATTTAAAAGGAATGGAGAAATTAATGATT GCGATATCAACAAAGCAATTAAATTAATAGAAGATTCTAAAAGACCTCTTCTATACGTAGGAGGTGGGGCTATATCTTCA GGAGCTCATGATGAAATAAAAACTTTGGCAAAGAATTATCAAATACCAGTTACCACAACCTTAATGGGAAAGGGTGCTTT CGATGAAAAAGATAATTTATCAGTAGGAATGTTAGGAATGCATGGAACTGCTTATGCAAATTTTGCTGTTACAGAATGCG ATCTTTTAATTGCTATTGGAGCTAGATTCGATGATAGGGTGACAGGTAAATTAGATACTTTTGCACCTAATGCAAAGGTG ATTCATATAGATATTGACCCGGCAGAAGTTAATAAAAATAGGCGTGTAGATGTTGCAATTGTTGCTGATGTTTCAAAAGC TGTTCTGAAAATTAATGAACAATCTCTAAAAAACAAATTTACTTGCCAGACGAAAAACTGGTTAGAAAAAATTGATTTTT GGAAACATAAACACCCTTTATATGACCCGCCTAAAGAAGGAGAAATTTATCCTCAGGAAGTTCTTTTAAAAGTGAGGGAA CTTTTACCAGAAGCTTATATAACTACAGATGTAGGACAACATCAAATGTGGGCTGCTCAATATCTTAGGAATTCTCCAAG AAAATGGATTAGTAGTGCAGGCTTAGGAACTATGGGTTTTGGATTGCCAGCGGCAATTGGAGTAAAAGCAGCCTTACCTA ATTCAGATGTAATTTGTATTGCAGGAGATGCAAGTGTCTTAATGAATATTCAAGAATTGGGAACCTTATCTCAATACGGT CTAAAGGTGAAATTGATTATTATTAATAATCGCTGGCAAGGGATGGTAAGACAATGGCAAGAAAGTTTCTATGATGAAAG ATATTCCTCATCTGATATGAGTTGTGGAGAACCTGATTTTGTAAAACTTGCTGAGTCTTTTGGGGTTAAAGGATACCTAA TTTCTGATAGAAAAGAATTACAAAATGACTTAAAAAATGCGTTTGATCATGACGGACCTGCCTTGATTAATATCCTTGTC AGAAGAGGTGAAAATTGTTATCCAATGGTTCCTCCTGGGAAAAGTAATGCTCAAATGGTTGGATATGTTAATTGTGAAGA CTAA
Upstream 100 bases:
>100_bases TAAAAGATTTTTTTTGAATATATTTCTGACATTACATTTCTAAATGAGGCAAAAGTATTTAATTGAGTTTAATATTTATA TTAAATATTGAATTTCTTTA
Downstream 100 bases:
>100_bases TTTTTTTAAAATTCATCATTTTAAAAAATTAACTTTAAGATAATTTAAAAACTTAGATATTTCTGAATTGAAAAAATTAT CAAAAATTTTAATTATAATC
Product: acetolactate synthase 3 catalytic subunit
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 587; Mature: 586
Protein sequence:
>587_residues MTLTSRSFSQGSSKHENPVWITGADALMDSLKIHGVKVIFGYPGGAILPIYDAVHKAEQDGWLKHYMVRHEQGGSHAADG YARSTGEVGVCFGTSGPGATNLVTGIATAQMDSVPLVVVTGQVPRPAIGTDAFQETDIFGITLPIVKHSWVIRDPSDIAK VVSEAFFIASSGRPGPVLIDIPKDVGQEFFNYQRVLPGEIIPKGFKRNGEINDCDINKAIKLIEDSKRPLLYVGGGAISS GAHDEIKTLAKNYQIPVTTTLMGKGAFDEKDNLSVGMLGMHGTAYANFAVTECDLLIAIGARFDDRVTGKLDTFAPNAKV IHIDIDPAEVNKNRRVDVAIVADVSKAVLKINEQSLKNKFTCQTKNWLEKIDFWKHKHPLYDPPKEGEIYPQEVLLKVRE LLPEAYITTDVGQHQMWAAQYLRNSPRKWISSAGLGTMGFGLPAAIGVKAALPNSDVICIAGDASVLMNIQELGTLSQYG LKVKLIIINNRWQGMVRQWQESFYDERYSSSDMSCGEPDFVKLAESFGVKGYLISDRKELQNDLKNAFDHDGPALINILV RRGENCYPMVPPGKSNAQMVGYVNCED
Sequences:
>Translated_587_residues MTLTSRSFSQGSSKHENPVWITGADALMDSLKIHGVKVIFGYPGGAILPIYDAVHKAEQDGWLKHYMVRHEQGGSHAADG YARSTGEVGVCFGTSGPGATNLVTGIATAQMDSVPLVVVTGQVPRPAIGTDAFQETDIFGITLPIVKHSWVIRDPSDIAK VVSEAFFIASSGRPGPVLIDIPKDVGQEFFNYQRVLPGEIIPKGFKRNGEINDCDINKAIKLIEDSKRPLLYVGGGAISS GAHDEIKTLAKNYQIPVTTTLMGKGAFDEKDNLSVGMLGMHGTAYANFAVTECDLLIAIGARFDDRVTGKLDTFAPNAKV IHIDIDPAEVNKNRRVDVAIVADVSKAVLKINEQSLKNKFTCQTKNWLEKIDFWKHKHPLYDPPKEGEIYPQEVLLKVRE LLPEAYITTDVGQHQMWAAQYLRNSPRKWISSAGLGTMGFGLPAAIGVKAALPNSDVICIAGDASVLMNIQELGTLSQYG LKVKLIIINNRWQGMVRQWQESFYDERYSSSDMSCGEPDFVKLAESFGVKGYLISDRKELQNDLKNAFDHDGPALINILV RRGENCYPMVPPGKSNAQMVGYVNCED >Mature_586_residues TLTSRSFSQGSSKHENPVWITGADALMDSLKIHGVKVIFGYPGGAILPIYDAVHKAEQDGWLKHYMVRHEQGGSHAADGY ARSTGEVGVCFGTSGPGATNLVTGIATAQMDSVPLVVVTGQVPRPAIGTDAFQETDIFGITLPIVKHSWVIRDPSDIAKV VSEAFFIASSGRPGPVLIDIPKDVGQEFFNYQRVLPGEIIPKGFKRNGEINDCDINKAIKLIEDSKRPLLYVGGGAISSG AHDEIKTLAKNYQIPVTTTLMGKGAFDEKDNLSVGMLGMHGTAYANFAVTECDLLIAIGARFDDRVTGKLDTFAPNAKVI HIDIDPAEVNKNRRVDVAIVADVSKAVLKINEQSLKNKFTCQTKNWLEKIDFWKHKHPLYDPPKEGEIYPQEVLLKVREL LPEAYITTDVGQHQMWAAQYLRNSPRKWISSAGLGTMGFGLPAAIGVKAALPNSDVICIAGDASVLMNIQELGTLSQYGL KVKLIIINNRWQGMVRQWQESFYDERYSSSDMSCGEPDFVKLAESFGVKGYLISDRKELQNDLKNAFDHDGPALINILVR RGENCYPMVPPGKSNAQMVGYVNCED
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=560, Percent_Identity=27.5, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI21361361, Length=591, Percent_Identity=24.8730964467005, Blast_Score=158, Evalue=1e-38, Organism=Escherichia coli, GI87081685, Length=558, Percent_Identity=45.6989247311828, Blast_Score=494, Evalue=1e-141, Organism=Escherichia coli, GI1790104, Length=563, Percent_Identity=43.3392539964476, Blast_Score=459, Evalue=1e-130, Organism=Escherichia coli, GI1786717, Length=572, Percent_Identity=31.2937062937063, Blast_Score=283, Evalue=2e-77, Organism=Escherichia coli, GI1787096, Length=562, Percent_Identity=27.4021352313167, Blast_Score=192, Evalue=7e-50, Organism=Escherichia coli, GI1788716, Length=551, Percent_Identity=24.8638838475499, Blast_Score=152, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17542570, Length=591, Percent_Identity=27.2419627749577, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17531299, Length=577, Percent_Identity=24.9566724436742, Blast_Score=129, Evalue=6e-30, Organism=Caenorhabditis elegans, GI17531301, Length=582, Percent_Identity=25.085910652921, Blast_Score=128, Evalue=7e-30, Organism=Saccharomyces cerevisiae, GI6323755, Length=587, Percent_Identity=42.0783645655877, Blast_Score=431, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6320816, Length=494, Percent_Identity=24.0890688259109, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6323163, Length=513, Percent_Identity=22.4171539961014, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI19922626, Length=565, Percent_Identity=26.3716814159292, Blast_Score=179, Evalue=5e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 64313; Mature: 64182
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTSRSFSQGSSKHENPVWITGADALMDSLKIHGVKVIFGYPGGAILPIYDAVHKAEQD CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHEECEEEEEEECCCCCEEHHHHHHHHHCCC GWLKHYMVRHEQGGSHAADGYARSTGEVGVCFGTSGPGATNLVTGIATAQMDSVPLVVVT CHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEE GQVPRPAIGTDAFQETDIFGITLPIVKHSWVIRDPSDIAKVVSEAFFIASSGRPGPVLID CCCCCCCCCCCCCCCCCEEEEEEEHHCCEEEEECHHHHHHHHHHHEEEECCCCCCCEEEE IPKDVGQEFFNYQRVLPGEIIPKGFKRNGEINDCDINKAIKLIEDSKRPLLYVGGGAISS CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCC GAHDEIKTLAKNYQIPVTTTLMGKGAFDEKDNLSVGMLGMHGTAYANFAVTECDLLIAIG CCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEEEECEEEEEEC ARFDDRVTGKLDTFAPNAKVIHIDIDPAEVNKNRRVDVAIVADVSKAVLKINEQSLKNKF CCCCCCCCCCEECCCCCCEEEEEECCHHHCCCCCEEEEEEEEHHHHHHHHHCHHHHCCCE TCQTKNWLEKIDFWKHKHPLYDPPKEGEIYPQEVLLKVRELLPEAYITTDVGQHQMWAAQ EECHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHEEECCCCCHHHHHHH YLRNSPRKWISSAGLGTMGFGLPAAIGVKAALPNSDVICIAGDASVLMNIQELGTLSQYG HHHCCHHHHHHHCCCCCCCCCCHHHHCEEEECCCCCEEEEECCHHHHHHHHHHCCHHHCC LKVKLIIINNRWQGMVRQWQESFYDERYSSSDMSCGEPDFVKLAESFGVKGYLISDRKEL CEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEECCHHHH QNDLKNAFDHDGPALINILVRRGENCYPMVPPGKSNAQMVGYVNCED HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure TLTSRSFSQGSSKHENPVWITGADALMDSLKIHGVKVIFGYPGGAILPIYDAVHKAEQD CCCCCCCCCCCCCCCCCEEEEEHHHHHHHHEECEEEEEEECCCCCEEHHHHHHHHHCCC GWLKHYMVRHEQGGSHAADGYARSTGEVGVCFGTSGPGATNLVTGIATAQMDSVPLVVVT CHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEE GQVPRPAIGTDAFQETDIFGITLPIVKHSWVIRDPSDIAKVVSEAFFIASSGRPGPVLID CCCCCCCCCCCCCCCCCEEEEEEEHHCCEEEEECHHHHHHHHHHHEEEECCCCCCCEEEE IPKDVGQEFFNYQRVLPGEIIPKGFKRNGEINDCDINKAIKLIEDSKRPLLYVGGGAISS CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCC GAHDEIKTLAKNYQIPVTTTLMGKGAFDEKDNLSVGMLGMHGTAYANFAVTECDLLIAIG CCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEEEECEEEEEEC ARFDDRVTGKLDTFAPNAKVIHIDIDPAEVNKNRRVDVAIVADVSKAVLKINEQSLKNKF CCCCCCCCCCEECCCCCCEEEEEECCHHHCCCCCEEEEEEEEHHHHHHHHHCHHHHCCCE TCQTKNWLEKIDFWKHKHPLYDPPKEGEIYPQEVLLKVRELLPEAYITTDVGQHQMWAAQ EECHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHEEECCCCCHHHHHHH YLRNSPRKWISSAGLGTMGFGLPAAIGVKAALPNSDVICIAGDASVLMNIQELGTLSQYG HHHCCHHHHHHHCCCCCCCCCCHHHHCEEEECCCCCEEEEECCHHHHHHHHHHCCHHHCC LKVKLIIINNRWQGMVRQWQESFYDERYSSSDMSCGEPDFVKLAESFGVKGYLISDRKEL CEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEECCHHHH QNDLKNAFDHDGPALINILVRRGENCYPMVPPGKSNAQMVGYVNCED HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12917641 [H]