| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
Click here to switch to the map view.
The map label for this gene is xylB
Identifier: 126695673
GI number: 126695673
Start: 306102
End: 307331
Strand: Reverse
Name: xylB
Synonym: P9301_03351
Alternate gene names: NA
Gene position: 307331-306102 (Counterclockwise)
Preceding gene: 126695674
Following gene: 126695671
Centisome position: 18.72
GC content: 33.09
Gene sequence:
>1230_bases ATGCCTGATAATTTTTATGGAGGGTTAGATTTTGGAACGAGTGGTGCAAGAATATCAATAATTAATCGTCATAAGAAATT AGTATATTCAAATTCAGTTCCTTATTCATACAGCTTTGAAAATCCAGATTCTTGGATAAATTCTTGTGAAAATCTCTTAA TTAGTTTACCTATTGAGATAAAAATTAACCTTAATAAATTGGCTATTTCCGGCACCTCAGGAACTTTAATTGCATCCAAT TTGCGAGGAGATCCGATAGGAGAAGCAATACCTTACTACCAAGCATGTATTGAACATAAGATCATTCTTGAATCCTTAAC TTCTGGAGAAGATCACCTGCGAACTCCATACAGTAGTCTTGCTAAAGCATTAAAACTATTAGATAAATATGGGACAAATA TACTTTTACGACATCAATCTGATTGGATCACTGGTTGGTTATTAAAAGATTGGACTCATGGAGAAGAAGGTAATAATCTA AAACTTGGTTGGGATCTAAAAAAAGAATCGTGGCCAAAGAGCTATCTCAATACTTCATGGCAAAAATGTCTACCTCAAAT AATAAAAAGTGGAAAAATTATTGGACAAGTAAACTCTGATTTAGCAGAGAGATTTAATTTAAATAAAAAATTAATATTAA CTTCAGGCACCACTGACTCTAATGCAGCTTTAATAGCCGCAGGGTTAGGTAAAGAAGATGGCCTCACAGTTTTAGGAACA ACAATTGTGATAAAAAAAATTATTGATAACCCTATAAAAAAACAGGGCATTACAATCCATAGAGTTAACGATGATTGGAT ATGTGGAGGAGCATCAAATGCTGGATGCGGTGTCTTGTCTAAGTTCTTTTCTGATTTAGAAATAAAGGAACTTAGTCGAC AAATTAATCCATCGAAAAATACTTCTTTAAATCTTTTACCTCTTAATAGTAAAGGAGATAGATTTCCTGTTAATAATGCT AATTTAGAGCCGATACTTGATCCAAGGCCAGTAAGCGACTCACTTTATTTACATGCATTATTCGAGGGGCTAGCCAAGAT CGAACTGAAAGGATGGGAAAAACTAGGCGAACTAACAGGTTCACTTCCAAAAAAAATTATTACTATTGGAGGAGGTTCAA AAAACCCACAATGGAGGAAAATAAGAGAAAAAATTATAAATATACCAATAGTTTCATGTAATAAAACTACTTCATTTGGA ACTGCCTTATTAGCGATCAATGCAAAATAA
Upstream 100 bases:
>100_bases TTTTGGCAGAAGAGATCTTGAGCTACCTTGGGAAAATGTAGAAGAAAAAGCAGCCAAATTAGCAGAGGCTTCCAAAATCT TTTTATAAATATTTTTTTCT
Downstream 100 bases:
>100_bases TAGTTTTTGGGGATATTTGATGAAGATATAAAATTTTTAATGAAAAGGGTTTCACAAACTACACATCGTAATTTAAAGTA TATAGGTTAGAGCCGGGATA
Product: carbohydrate kinase
Products: NA
Alternate protein names: Carbohydrate Kinase; Sugar Kinase; Xylulose Kinase; Carbohydrate Kinase FGGY-Like Protein; FGGY Family Sugar Kinase; Carbohydrate Kinase Fggy Family; Carbohydrate Kinase FGGY Family; Carbohydrate Kinase FGGY Family Protein; Carbohydrate Kinase Fggy; FGGY Family Carbohydrate Kinase N- Domain Protein; D-Xylulose Kinase; FGGY Family Carbohydrate Kinase; Carbohydrate Kinase Protein; Pentulose/Hexulose Kinase
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MPDNFYGGLDFGTSGARISIINRHKKLVYSNSVPYSYSFENPDSWINSCENLLISLPIEIKINLNKLAISGTSGTLIASN LRGDPIGEAIPYYQACIEHKIILESLTSGEDHLRTPYSSLAKALKLLDKYGTNILLRHQSDWITGWLLKDWTHGEEGNNL KLGWDLKKESWPKSYLNTSWQKCLPQIIKSGKIIGQVNSDLAERFNLNKKLILTSGTTDSNAALIAAGLGKEDGLTVLGT TIVIKKIIDNPIKKQGITIHRVNDDWICGGASNAGCGVLSKFFSDLEIKELSRQINPSKNTSLNLLPLNSKGDRFPVNNA NLEPILDPRPVSDSLYLHALFEGLAKIELKGWEKLGELTGSLPKKIITIGGGSKNPQWRKIREKIINIPIVSCNKTTSFG TALLAINAK
Sequences:
>Translated_409_residues MPDNFYGGLDFGTSGARISIINRHKKLVYSNSVPYSYSFENPDSWINSCENLLISLPIEIKINLNKLAISGTSGTLIASN LRGDPIGEAIPYYQACIEHKIILESLTSGEDHLRTPYSSLAKALKLLDKYGTNILLRHQSDWITGWLLKDWTHGEEGNNL KLGWDLKKESWPKSYLNTSWQKCLPQIIKSGKIIGQVNSDLAERFNLNKKLILTSGTTDSNAALIAAGLGKEDGLTVLGT TIVIKKIIDNPIKKQGITIHRVNDDWICGGASNAGCGVLSKFFSDLEIKELSRQINPSKNTSLNLLPLNSKGDRFPVNNA NLEPILDPRPVSDSLYLHALFEGLAKIELKGWEKLGELTGSLPKKIITIGGGSKNPQWRKIREKIINIPIVSCNKTTSFG TALLAINAK >Mature_408_residues PDNFYGGLDFGTSGARISIINRHKKLVYSNSVPYSYSFENPDSWINSCENLLISLPIEIKINLNKLAISGTSGTLIASNL RGDPIGEAIPYYQACIEHKIILESLTSGEDHLRTPYSSLAKALKLLDKYGTNILLRHQSDWITGWLLKDWTHGEEGNNLK LGWDLKKESWPKSYLNTSWQKCLPQIIKSGKIIGQVNSDLAERFNLNKKLILTSGTTDSNAALIAAGLGKEDGLTVLGTT IVIKKIIDNPIKKQGITIHRVNDDWICGGASNAGCGVLSKFFSDLEIKELSRQINPSKNTSLNLLPLNSKGDRFPVNNAN LEPILDPRPVSDSLYLHALFEGLAKIELKGWEKLGELTGSLPKKIITIGGGSKNPQWRKIREKIINIPIVSCNKTTSFGT ALLAINAK
Specific function: Unknown
COG id: COG1070
COG function: function code G; Sugar (pentulose and hexulose) kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45059; Mature: 44928
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDNFYGGLDFGTSGARISIINRHKKLVYSNSVPYSYSFENPDSWINSCENLLISLPIEI CCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCEEECCCCHHHHHHHHHHEEEECCEEE KINLNKLAISGTSGTLIASNLRGDPIGEAIPYYQACIEHKIILESLTSGEDHLRTPYSSL EEEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHH AKALKLLDKYGTNILLRHQSDWITGWLLKDWTHGEEGNNLKLGWDLKKESWPKSYLNTSW HHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHCCCH QKCLPQIIKSGKIIGQVNSDLAERFNLNKKLILTSGTTDSNAALIAAGLGKEDGLTVLGT HHHHHHHHHCCCEEEECCHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCCCEEEEHH TIVIKKIIDNPIKKQGITIHRVNDDWICGGASNAGCGVLSKFFSDLEIKELSRQINPSKN HHHHHHHHCCCHHHCCEEEEECCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCC TSLNLLPLNSKGDRFPVNNANLEPILDPRPVSDSLYLHALFEGLAKIELKGWEKLGELTG CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEHHHHHHHHHHHC SLPKKIITIGGGSKNPQWRKIREKIINIPIVSCNKTTSFGTALLAINAK CCCCEEEEECCCCCCCHHHHHHHHHHCCEEEECCCCCCCCEEEEEEECC >Mature Secondary Structure PDNFYGGLDFGTSGARISIINRHKKLVYSNSVPYSYSFENPDSWINSCENLLISLPIEI CCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCEEECCCCHHHHHHHHHHEEEECCEEE KINLNKLAISGTSGTLIASNLRGDPIGEAIPYYQACIEHKIILESLTSGEDHLRTPYSSL EEEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHH AKALKLLDKYGTNILLRHQSDWITGWLLKDWTHGEEGNNLKLGWDLKKESWPKSYLNTSW HHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHCCCH QKCLPQIIKSGKIIGQVNSDLAERFNLNKKLILTSGTTDSNAALIAAGLGKEDGLTVLGT HHHHHHHHHCCCEEEECCHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCCCEEEEHH TIVIKKIIDNPIKKQGITIHRVNDDWICGGASNAGCGVLSKFFSDLEIKELSRQINPSKN HHHHHHHHCCCHHHCCEEEEECCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCC TSLNLLPLNSKGDRFPVNNANLEPILDPRPVSDSLYLHALFEGLAKIELKGWEKLGELTG CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEHHHHHHHHHHHC SLPKKIITIGGGSKNPQWRKIREKIINIPIVSCNKTTSFGTALLAINAK CCCCEEEEECCCCCCCHHHHHHHHHHCCEEEECCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA