| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126695671
Identifier: 126695671
GI number: 126695671
Start: 304651
End: 305286
Strand: Reverse
Name: 126695671
Synonym: P9301_03331
Alternate gene names: NA
Gene position: 305286-304651 (Counterclockwise)
Preceding gene: 126695673
Following gene: 126695670
Centisome position: 18.59
GC content: 34.59
Gene sequence:
>636_bases ATGAATAAAATACAGAAATTTCTCTCAGTAGTTTTTTTTATTGCAATATTTGTTGTATTGATTTACTTAATCCAAAATTA TGGGATTGAGCCCCTGAGGAACAAAATAGAAAGTATGGGAATTTGGGCTCCTTTTGGAATTTTCATACTCAGAGGAGTAA GTATTATTTTACCAGCTCTTCCAAGTTCAGCTTATTCTCTACTAGCAGGATCATTATTAGGATTTCAAAAAGGTTATATT ACAATAGTCTTTTCTGATATCGTTTTTTGCCAAGCTGCTTTCTTTATTGCAAGAAATTATGGGCGAGTCCCTGTAAGGAA TTTGGTAGGCACCAAAGCGATGAAAAAAATTGAAAGTTTTAATCAAAACCAACTTGAAGAAAATTTCTTTCTCATGACAG GTCTACTTATGACTGGCCTTTTTGATTTTCTAAGCTACGCAATTGGGATTGGAGGAACTCGCTGGAAAATATTTACTCCT GCATTATTAATAAGTCTTCTAATCAGTGACTCTATACTTGTCGCAGTAGGAGCTGGTGTTAGCCAGGGAGCAGGATTATT TCTAGGGATTGCTCTATTGGGAATGTTTGCTTTAGCGACTATTTCAGGTTTGGCAAAAAATAAAATGCCTAAATAA
Upstream 100 bases:
>100_bases ATTAAAAATTTGTAAAAATTTTTATTGATTAGTATTTCTATTATAGATACAATCAAATATTAAATTAAGAGTTTACTCCC AATAAATTCACTAAAAAATA
Downstream 100 bases:
>100_bases CAAAACAGTTGATAATTCTGTAATCAAAGAAGAAAGATATGACATTTTCGCAAACAATAACTACATAAATAATGATTCAT GCAAGAATAGAGATCGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MNKIQKFLSVVFFIAIFVVLIYLIQNYGIEPLRNKIESMGIWAPFGIFILRGVSIILPALPSSAYSLLAGSLLGFQKGYI TIVFSDIVFCQAAFFIARNYGRVPVRNLVGTKAMKKIESFNQNQLEENFFLMTGLLMTGLFDFLSYAIGIGGTRWKIFTP ALLISLLISDSILVAVGAGVSQGAGLFLGIALLGMFALATISGLAKNKMPK
Sequences:
>Translated_211_residues MNKIQKFLSVVFFIAIFVVLIYLIQNYGIEPLRNKIESMGIWAPFGIFILRGVSIILPALPSSAYSLLAGSLLGFQKGYI TIVFSDIVFCQAAFFIARNYGRVPVRNLVGTKAMKKIESFNQNQLEENFFLMTGLLMTGLFDFLSYAIGIGGTRWKIFTP ALLISLLISDSILVAVGAGVSQGAGLFLGIALLGMFALATISGLAKNKMPK >Mature_211_residues MNKIQKFLSVVFFIAIFVVLIYLIQNYGIEPLRNKIESMGIWAPFGIFILRGVSIILPALPSSAYSLLAGSLLGFQKGYI TIVFSDIVFCQAAFFIARNYGRVPVRNLVGTKAMKKIESFNQNQLEENFFLMTGLLMTGLFDFLSYAIGIGGTRWKIFTP ALLISLLISDSILVAVGAGVSQGAGLFLGIALLGMFALATISGLAKNKMPK
Specific function: Unknown
COG id: COG0398
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23020; Mature: 23020
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIQKFLSVVFFIAIFVVLIYLIQNYGIEPLRNKIESMGIWAPFGIFILRGVSIILPAL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC PSSAYSLLAGSLLGFQKGYITIVFSDIVFCQAAFFIARNYGRVPVRNLVGTKAMKKIESF CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC NQNQLEENFFLMTGLLMTGLFDFLSYAIGIGGTRWKIFTPALLISLLISDSILVAVGAGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHCCCCC SQGAGLFLGIALLGMFALATISGLAKNKMPK CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNKIQKFLSVVFFIAIFVVLIYLIQNYGIEPLRNKIESMGIWAPFGIFILRGVSIILPAL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC PSSAYSLLAGSLLGFQKGYITIVFSDIVFCQAAFFIARNYGRVPVRNLVGTKAMKKIESF CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC NQNQLEENFFLMTGLLMTGLFDFLSYAIGIGGTRWKIFTPALLISLLISDSILVAVGAGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHCCCCC SQGAGLFLGIALLGMFALATISGLAKNKMPK CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA