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The map label for this gene is yrbE [H]

Identifier: 126695634

GI number: 126695634

Start: 271716

End: 272720

Strand: Reverse

Name: yrbE [H]

Synonym: P9301_02961

Alternate gene names: 126695634

Gene position: 272720-271716 (Counterclockwise)

Preceding gene: 126695636

Following gene: 126695631

Centisome position: 16.61

GC content: 36.02

Gene sequence:

>1005_bases
ATGCAACCAACCTCATCACCCGTAAAGGTTGGAGTCATAGGTATAGGAAATATGGGCTGGCATCATGCTCGAGTACTAAG
TTTACTCAAAGATGCCAATCTCATTGGAGTCGCAGATCCAAATGAAGAGAGAGGAAAATTAGCTATTGAGCAATTTCAAT
GTGAATGGTTCAAGGATTATAAGGACCTAATTCCAAAAGTTGATGCTATCTGTATCGCTGTCCCTACACTACTTCATCAA
AAAGTAGGACTAGATTGTCTCAAGGGAGGTGCTAATGTTCTCATTGAAAAACCAATTGCAGCTAACGAGTTGGAAGCAAA
ATCTTTAATACAGGCTGCTAATGCAAATAACTGTCTATTACAAGTTGGGCATATTGAAAGATTTAATCCTGCTTTTAGAG
AATTAAATAAAATAGTAAACAATGAAGAAATTGTTGTTTTAGAAGCAAGGAGGCATAGTCCTCATGCAGACAGAGCAAAT
GATGTATCTGTAGTAATGGATTTAATGATTCATGACATTGATCTTATTTTGGAGCTTGTAAACTCAAAAATACAAAAATT
AGCAGCAGTTGGAGGAAGAAATAGCCAAGGATTAATAGATTATGTCAATGCTACTTTAGTTTTTAAAAATAATGTTATTG
CAAGCCTAACTGCAAGCAAAATGAGTCACAAAAAAATTAGAAGTTTAAGTGCTCACTGCCAAAATGGCCTAGTAGAAACT
GATTTCTTAAATCACTCTTTACAAATCCATCGAAAGTCTCATGAATCATACACAGCAGAGCATGGAGAATTAGTTTATAG
AAATGATGGATATGTCGAAGAAGTTAGTACAACCTCCATTGAACCTCTTTATGCAGAACTGGAACATTTTCTTAAGTGCG
TTCAGGGCAAGGAAATACCTGAGGTAGATGGTGAACAAGCCTCAAGAGCACTAAAAATTGCTGACTTTATAGAGAGTGCT
GTAGAAAATTCTGGAGATGCGATTTTACTTGAAAATCCCGTCTAA

Upstream 100 bases:

>100_bases
TGTCAGGTCCAAAAATTGATCGTGTTAAAATAATTCTTCCCAAAAGCTAAATATGACTCCCCATAGAGGATAATGATAAT
TAATATATGGATTTGAAATT

Downstream 100 bases:

>100_bases
TAGTAACAATCTAAACTTTAAGAATTTTATTTAAATCCAACTGCAGCTTGCCAAACAAACACTAATAAAAAGAAAAATAA
AGGAATCAGTGGAAGAACAT

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MQPTSSPVKVGVIGIGNMGWHHARVLSLLKDANLIGVADPNEERGKLAIEQFQCEWFKDYKDLIPKVDAICIAVPTLLHQ
KVGLDCLKGGANVLIEKPIAANELEAKSLIQAANANNCLLQVGHIERFNPAFRELNKIVNNEEIVVLEARRHSPHADRAN
DVSVVMDLMIHDIDLILELVNSKIQKLAAVGGRNSQGLIDYVNATLVFKNNVIASLTASKMSHKKIRSLSAHCQNGLVET
DFLNHSLQIHRKSHESYTAEHGELVYRNDGYVEEVSTTSIEPLYAELEHFLKCVQGKEIPEVDGEQASRALKIADFIESA
VENSGDAILLENPV

Sequences:

>Translated_334_residues
MQPTSSPVKVGVIGIGNMGWHHARVLSLLKDANLIGVADPNEERGKLAIEQFQCEWFKDYKDLIPKVDAICIAVPTLLHQ
KVGLDCLKGGANVLIEKPIAANELEAKSLIQAANANNCLLQVGHIERFNPAFRELNKIVNNEEIVVLEARRHSPHADRAN
DVSVVMDLMIHDIDLILELVNSKIQKLAAVGGRNSQGLIDYVNATLVFKNNVIASLTASKMSHKKIRSLSAHCQNGLVET
DFLNHSLQIHRKSHESYTAEHGELVYRNDGYVEEVSTTSIEPLYAELEHFLKCVQGKEIPEVDGEQASRALKIADFIESA
VENSGDAILLENPV
>Mature_334_residues
MQPTSSPVKVGVIGIGNMGWHHARVLSLLKDANLIGVADPNEERGKLAIEQFQCEWFKDYKDLIPKVDAICIAVPTLLHQ
KVGLDCLKGGANVLIEKPIAANELEAKSLIQAANANNCLLQVGHIERFNPAFRELNKIVNNEEIVVLEARRHSPHADRAN
DVSVVMDLMIHDIDLILELVNSKIQKLAAVGGRNSQGLIDYVNATLVFKNNVIASLTASKMSHKKIRSLSAHCQNGLVET
DFLNHSLQIHRKSHESYTAEHGELVYRNDGYVEEVSTTSIEPLYAELEHFLKCVQGKEIPEVDGEQASRALKIADFIESA
VENSGDAILLENPV

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Drosophila melanogaster, GI24581117, Length=171, Percent_Identity=27.4853801169591, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: NA

Molecular weight: Translated: 36855; Mature: 36855

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPTSSPVKVGVIGIGNMGWHHARVLSLLKDANLIGVADPNEERGKLAIEQFQCEWFKDY
CCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHH
KDLIPKVDAICIAVPTLLHQKVGLDCLKGGANVLIEKPIAANELEAKSLIQAANANNCLL
HHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEE
QVGHIERFNPAFRELNKIVNNEEIVVLEARRHSPHADRANDVSVVMDLMIHDIDLILELV
EECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NSKIQKLAAVGGRNSQGLIDYVNATLVFKNNVIASLTASKMSHKKIRSLSAHCQNGLVET
HHHHHHHHHHCCCCCCCHHEECCEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHCCCEEH
DFLNHSLQIHRKSHESYTAEHGELVYRNDGYVEEVSTTSIEPLYAELEHFLKCVQGKEIP
HHHCCHHEEEECCCCCCCCCCCCEEECCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCC
EVDGEQASRALKIADFIESAVENSGDAILLENPV
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
>Mature Secondary Structure
MQPTSSPVKVGVIGIGNMGWHHARVLSLLKDANLIGVADPNEERGKLAIEQFQCEWFKDY
CCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHH
KDLIPKVDAICIAVPTLLHQKVGLDCLKGGANVLIEKPIAANELEAKSLIQAANANNCLL
HHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEE
QVGHIERFNPAFRELNKIVNNEEIVVLEARRHSPHADRANDVSVVMDLMIHDIDLILELV
EECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NSKIQKLAAVGGRNSQGLIDYVNATLVFKNNVIASLTASKMSHKKIRSLSAHCQNGLVET
HHHHHHHHHHCCCCCCCHHEECCEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHCCCEEH
DFLNHSLQIHRKSHESYTAEHGELVYRNDGYVEEVSTTSIEPLYAELEHFLKCVQGKEIP
HHHCCHHEEEECCCCCCCCCCCCEEECCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCC
EVDGEQASRALKIADFIESAVENSGDAILLENPV
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]