| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126695594
Identifier: 126695594
GI number: 126695594
Start: 238198
End: 238605
Strand: Reverse
Name: 126695594
Synonym: P9301_02561
Alternate gene names: NA
Gene position: 238605-238198 (Counterclockwise)
Preceding gene: 126695596
Following gene: 126695593
Centisome position: 14.53
GC content: 29.41
Gene sequence:
>408_bases ATGACTGAATCAAACAAATCATTATTTGGCAAACCTGGCACATTTTATATTTATAAATCTTATGGCATTCATCATTGTTT AAACATAGTTACTGATAAAGAAAATTTAGCGAGTGGAGTATTAATAAGATCAGTTTTTATCTCTAAAAAGAATGAAAGAT TAGCTTCTGGACCTGGCCTTGTTACTAAGACATTCAGCATAGACATTTCATTTAACTCACTTGAAGTTCTTAATAACAAA TCTTTATGGATTTCTCCAAGAAAATCCAATTTAGAAGAGAAAGATCTTATTCAAACTACGAGAATTGGCATATCAAAGGC AAAAAATATAAAATGGCGTTGGTATCTCAAAAATAGTAGGAGTGTAAGTAAAAGATTAAAAGGTGACAGAACACCTAAAT TTCAATAA
Upstream 100 bases:
>100_bases CCTCATAAAAAAAAATAATGAGATAGATCAAGTTAAAGGGGTAATTGTTGAAACTGAAGCTTATTCACAGGAAGAAGAGG CCTGCCATGGCTACCGCAAA
Downstream 100 bases:
>100_bases TCATTTATCTTTTAAACGTAATGCAAATTTGGCCTCATAAACATATCCACTCACTAGCTAATTTTTCAATAAAAGATTAT GAGTCAGTATTCGAATTAGC
Product: methylpurine-DNA glycosylase (MPG)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTESNKSLFGKPGTFYIYKSYGIHHCLNIVTDKENLASGVLIRSVFISKKNERLASGPGLVTKTFSIDISFNSLEVLNNK SLWISPRKSNLEEKDLIQTTRIGISKAKNIKWRWYLKNSRSVSKRLKGDRTPKFQ
Sequences:
>Translated_135_residues MTESNKSLFGKPGTFYIYKSYGIHHCLNIVTDKENLASGVLIRSVFISKKNERLASGPGLVTKTFSIDISFNSLEVLNNK SLWISPRKSNLEEKDLIQTTRIGISKAKNIKWRWYLKNSRSVSKRLKGDRTPKFQ >Mature_134_residues TESNKSLFGKPGTFYIYKSYGIHHCLNIVTDKENLASGVLIRSVFISKKNERLASGPGLVTKTFSIDISFNSLEVLNNKS LWISPRKSNLEEKDLIQTTRIGISKAKNIKWRWYLKNSRSVSKRLKGDRTPKFQ
Specific function: Unknown
COG id: COG2094
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA glycosylase MPG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011034 - InterPro: IPR003180 [H]
Pfam domain/function: PF02245 Pur_DNA_glyco [H]
EC number: 3.2.2.-
Molecular weight: Translated: 15453; Mature: 15322
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESNKSLFGKPGTFYIYKSYGIHHCLNIVTDKENLASGVLIRSVFISKKNERLASGPGL CCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCE VTKTFSIDISFNSLEVLNNKSLWISPRKSNLEEKDLIQTTRIGISKAKNIKWRWYLKNSR EEEEEEEEEECCCEEEECCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCC SVSKRLKGDRTPKFQ HHHHHHCCCCCCCCC >Mature Secondary Structure TESNKSLFGKPGTFYIYKSYGIHHCLNIVTDKENLASGVLIRSVFISKKNERLASGPGL CCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCE VTKTFSIDISFNSLEVLNNKSLWISPRKSNLEEKDLIQTTRIGISKAKNIKWRWYLKNSR EEEEEEEEEECCCEEEECCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCC SVSKRLKGDRTPKFQ HHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA