| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126695596
Identifier: 126695596
GI number: 126695596
Start: 239249
End: 239974
Strand: Reverse
Name: 126695596
Synonym: P9301_02581
Alternate gene names: NA
Gene position: 239974-239249 (Counterclockwise)
Preceding gene: 126695599
Following gene: 126695594
Centisome position: 14.62
GC content: 30.44
Gene sequence:
>726_bases ATGGGCCATGGCTCAGCTATTCTTTTAGGGTTTAGCTTCCCAGTTTTTACGAGAGTTCATTTACAACATCATATTCATGT AAATCACCCCAAAAATGATCCAGACCATATTGTCAGTACTTTTGGTCCAATTTGGCTAATTGCTCCAAGATTTTTTTATC ATGAGGTGTTTTTCTTTCAAAGAAAACTCTGGCGAAGATATGAATTATTACAATGGGGAATTGAAAGATCAATATTCATA ACAATTATTTTGGCAGGTTTGAAATTTGACTTTATGAATTTAATTTATAATTTATGGTTCGGCCCAGCATTAATGGTAGG AGTTACCTTAGGAATATTTTTTGATTATTTACCCCATAGACCATTTCGATCAAGAAATAAATGGATAAATTCTCGAGTTT ATCCAAGCAAATTTATGAATTTATTAATAATGGGACAAAATTACCATCTCATTCATCATCTTTGGCCTTCGATTCCTTGG TTTGAATACAAAATAGCTTATGAAAAAACTAAGCCATTATTGGATAAAAAAGGCTCCCCTCAAAGGGTTGGGATATTTGA AAGTCAAGAAGACATTTTTAACTTTATTTATGATTTATTAATAGGTGTAAGGAGTCATAGCAAAAAGAGGGGGAAAATAA GAAAAATAATAAATTTATATCCAGGCTTTAAAATAAAAAAATTTTTATTAAAGTTAGTCAACAAGACATTTATTGGAAGC AACTAA
Upstream 100 bases:
>100_bases ACTTGTAGCCACTGCTTTTTTAGCTTTACATATTGAAGGTACTGTTATCCATGATGCCTGTCATAAAGCTGCTCATCCGG TTCCTTGGATAAATCAAGCA
Downstream 100 bases:
>100_bases CTTACTCATTAATTATTTTTGGTACTTTAAAATATTTATCCTCTCTAGATGGGCCCAATTCTAGGATTTCTTCGTTGCAA TCAGAATTTTTATTTTCGTC
Product: Beta-carotene hydroxylase
Products: NA
Alternate protein names: Fatty Acid Desaturase; Fatty Acid Desaturase Domain Protein; Electron Transfer Protein FdxB; Beta-Carotene Oxygenase CrtR; Beta Carotene Hydroxylase; Phthalate 4 5-Dioxygenase; B-Carotene Hydroxylase; Delta(12)-Fatty Acid Dehydrogenase
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MGHGSAILLGFSFPVFTRVHLQHHIHVNHPKNDPDHIVSTFGPIWLIAPRFFYHEVFFFQRKLWRRYELLQWGIERSIFI TIILAGLKFDFMNLIYNLWFGPALMVGVTLGIFFDYLPHRPFRSRNKWINSRVYPSKFMNLLIMGQNYHLIHHLWPSIPW FEYKIAYEKTKPLLDKKGSPQRVGIFESQEDIFNFIYDLLIGVRSHSKKRGKIRKIINLYPGFKIKKFLLKLVNKTFIGS N
Sequences:
>Translated_241_residues MGHGSAILLGFSFPVFTRVHLQHHIHVNHPKNDPDHIVSTFGPIWLIAPRFFYHEVFFFQRKLWRRYELLQWGIERSIFI TIILAGLKFDFMNLIYNLWFGPALMVGVTLGIFFDYLPHRPFRSRNKWINSRVYPSKFMNLLIMGQNYHLIHHLWPSIPW FEYKIAYEKTKPLLDKKGSPQRVGIFESQEDIFNFIYDLLIGVRSHSKKRGKIRKIINLYPGFKIKKFLLKLVNKTFIGS N >Mature_240_residues GHGSAILLGFSFPVFTRVHLQHHIHVNHPKNDPDHIVSTFGPIWLIAPRFFYHEVFFFQRKLWRRYELLQWGIERSIFIT IILAGLKFDFMNLIYNLWFGPALMVGVTLGIFFDYLPHRPFRSRNKWINSRVYPSKFMNLLIMGQNYHLIHHLWPSIPWF EYKIAYEKTKPLLDKKGSPQRVGIFESQEDIFNFIYDLLIGVRSHSKKRGKIRKIINLYPGFKIKKFLLKLVNKTFIGSN
Specific function: Unknown
COG id: COG3239
COG function: function code I; Fatty acid desaturase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.14.13.-
Molecular weight: Translated: 28735; Mature: 28604
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHGSAILLGFSFPVFTRVHLQHHIHVNHPKNDPDHIVSTFGPIWLIAPRFFYHEVFFFQ CCCCCEEEEEECCHHHHHHHHHEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH RKLWRRYELLQWGIERSIFITIILAGLKFDFMNLIYNLWFGPALMVGVTLGIFFDYLPHR HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PFRSRNKWINSRVYPSKFMNLLIMGQNYHLIHHLWPSIPWFEYKIAYEKTKPLLDKKGSP CCCHHHHHHCCCCCHHHHHEEEEECCCCHHHHHHCCCCCCEEEEEEHHHHCHHHCCCCCC QRVGIFESQEDIFNFIYDLLIGVRSHSKKRGKIRKIINLYPGFKIKKFLLKLVNKTFIGS CEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC N C >Mature Secondary Structure GHGSAILLGFSFPVFTRVHLQHHIHVNHPKNDPDHIVSTFGPIWLIAPRFFYHEVFFFQ CCCCEEEEEECCHHHHHHHHHEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH RKLWRRYELLQWGIERSIFITIILAGLKFDFMNLIYNLWFGPALMVGVTLGIFFDYLPHR HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PFRSRNKWINSRVYPSKFMNLLIMGQNYHLIHHLWPSIPWFEYKIAYEKTKPLLDKKGSP CCCHHHHHHCCCCCHHHHHEEEEECCCCHHHHHHCCCCCCEEEEEEHHHHCHHHCCCCCC QRVGIFESQEDIFNFIYDLLIGVRSHSKKRGKIRKIINLYPGFKIKKFLLKLVNKTFIGS CEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA