| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126695520
Identifier: 126695520
GI number: 126695520
Start: 168383
End: 169843
Strand: Reverse
Name: 126695520
Synonym: P9301_01821
Alternate gene names: NA
Gene position: 169843-168383 (Counterclockwise)
Preceding gene: 126695522
Following gene: 126695519
Centisome position: 10.34
GC content: 20.33
Gene sequence:
>1461_bases ATGAAACTTAGAGTAATAGCAATAATCCTATTATTATCTTTATTACTTTTTTTTGGTTTTAAAAAAGTTTCTACTAATAA AAATAAGGAACAAAGTACAAATATTGAGCAACTAAATATCTTAAAATATGCACCTGAAAACAATAAATTATTATTTATTT CAAATTTAGATAATTTTAATATCGTTAATAATAATGAAAAGGATAAAAATCCAACAAATAAAGATAACTTTTTTTTAATA AAAGACTCTATATTAGATTACTTAGGAATAGATCTAGACAACAATAAATTAGAAGATATCTATAATAATGAACTTATAAT CTCAACTTTTGAAAATAATAAAAAACTTAAAGATGACATTTTGATTGTTTTTAAAATTAAGCCAGAAAAAACAATAGACG ATTTATTAAATTTGCCTAATAAAATTGATCAGATTGATGAGATAATTTCAATTAATAGAGAAAACAAAATAAATTTCCTT AACTATATATACCGTACTGAAGATAATTATATAATTGCTTCATCTGATAAAAAATTGATTAAAAATAGTATTAACTCTAG AAATGATTTTAAAGAAAAAAAATTTCAATATGAGGGAGAACTTTTCGGACTAAAAAACCAAAAAAATATACTATTTACAA AGAAATTTAGAGATAGTATTTTTTTTAATAAAGAAATTTTGAATGAGGGAAATGAGGATGTTGTAGCAACAATATTCGAC TTAAAAAATGATAATTTAATTTTAAAATCATTTTTACTAAATAGTAAAAAAAATATTGATATTCTTACTTACGATAACCT AATAAATAAAGAAAATACGAATGAAGATTATCCTGAAGTTTCAATTTTTAGTGATGTAAAAAATTTTAAGCAATATCTAA AACCTCTAACTAATAATTTTGAAAATAGTTTTTTTGAAGACTTAAATCAAACCGCAAGTCAAAATATTTTAATTCTCAAT TCAAAAAAAAATTGGCTTATTACATTTGAAAAAAATACTGAAGATCAATTTGATTTAAGTGCTTGGAAAAAACTAAAAGA TTTCAACAAATATACTTTAAAACAAAACGAAGATATTTACTCGATTTATTCCAAAGATATTCTTGAAGAAAAAGACGATG TAATAAAACAATTAACTTATGAAAATATCTATTCAATAGAAGCAGGAAATTTAAAAATCATAAGTAATCATTTAATTGAT GGTAAAAAACTAGATACAATCTCAAAAAAATTTTATAATTTAAAAAATAATAAAGATAATTCTGCTTTTCTCTATGCAAA AGTTGATATCAAAAATGGAAATTCTAATAAAGTTGAATATTTTTCTGATTTGGAAGATCTTAATTTTCTCATAAGAAATA TTTTAAAAATATCAAATGAAGAATCTATTGAAATCATAAGACAATCTATTCCTGAAAAAAATCCAATTCTCTATACAGAA ACTAGTTTAAAAATTAATTAA
Upstream 100 bases:
>100_bases TAACTTCCCAATTTATAGGATAAATTATGTGTTATTTACAATTTAATAAATTAAGTTGCAATAGGAAGTTTATTGTTAAA AATAAAAATAAACATTGATA
Downstream 100 bases:
>100_bases TAAACTTACTTGAATTAAGCTTAAAAAAAATCAATTTAAATTCTCCGCCAAATTAATAACTTGTGGTTAATTAAAAATTA TTTGACTATCTTTAATCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MKLRVIAIILLLSLLLFFGFKKVSTNKNKEQSTNIEQLNILKYAPENNKLLFISNLDNFNIVNNNEKDKNPTNKDNFFLI KDSILDYLGIDLDNNKLEDIYNNELIISTFENNKKLKDDILIVFKIKPEKTIDDLLNLPNKIDQIDEIISINRENKINFL NYIYRTEDNYIIASSDKKLIKNSINSRNDFKEKKFQYEGELFGLKNQKNILFTKKFRDSIFFNKEILNEGNEDVVATIFD LKNDNLILKSFLLNSKKNIDILTYDNLINKENTNEDYPEVSIFSDVKNFKQYLKPLTNNFENSFFEDLNQTASQNILILN SKKNWLITFEKNTEDQFDLSAWKKLKDFNKYTLKQNEDIYSIYSKDILEEKDDVIKQLTYENIYSIEAGNLKIISNHLID GKKLDTISKKFYNLKNNKDNSAFLYAKVDIKNGNSNKVEYFSDLEDLNFLIRNILKISNEESIEIIRQSIPEKNPILYTE TSLKIN
Sequences:
>Translated_486_residues MKLRVIAIILLLSLLLFFGFKKVSTNKNKEQSTNIEQLNILKYAPENNKLLFISNLDNFNIVNNNEKDKNPTNKDNFFLI KDSILDYLGIDLDNNKLEDIYNNELIISTFENNKKLKDDILIVFKIKPEKTIDDLLNLPNKIDQIDEIISINRENKINFL NYIYRTEDNYIIASSDKKLIKNSINSRNDFKEKKFQYEGELFGLKNQKNILFTKKFRDSIFFNKEILNEGNEDVVATIFD LKNDNLILKSFLLNSKKNIDILTYDNLINKENTNEDYPEVSIFSDVKNFKQYLKPLTNNFENSFFEDLNQTASQNILILN SKKNWLITFEKNTEDQFDLSAWKKLKDFNKYTLKQNEDIYSIYSKDILEEKDDVIKQLTYENIYSIEAGNLKIISNHLID GKKLDTISKKFYNLKNNKDNSAFLYAKVDIKNGNSNKVEYFSDLEDLNFLIRNILKISNEESIEIIRQSIPEKNPILYTE TSLKIN >Mature_486_residues MKLRVIAIILLLSLLLFFGFKKVSTNKNKEQSTNIEQLNILKYAPENNKLLFISNLDNFNIVNNNEKDKNPTNKDNFFLI KDSILDYLGIDLDNNKLEDIYNNELIISTFENNKKLKDDILIVFKIKPEKTIDDLLNLPNKIDQIDEIISINRENKINFL NYIYRTEDNYIIASSDKKLIKNSINSRNDFKEKKFQYEGELFGLKNQKNILFTKKFRDSIFFNKEILNEGNEDVVATIFD LKNDNLILKSFLLNSKKNIDILTYDNLINKENTNEDYPEVSIFSDVKNFKQYLKPLTNNFENSFFEDLNQTASQNILILN SKKNWLITFEKNTEDQFDLSAWKKLKDFNKYTLKQNEDIYSIYSKDILEEKDDVIKQLTYENIYSIEAGNLKIISNHLID GKKLDTISKKFYNLKNNKDNSAFLYAKVDIKNGNSNKVEYFSDLEDLNFLIRNILKISNEESIEIIRQSIPEKNPILYTE TSLKIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57176; Mature: 57176
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRVIAIILLLSLLLFFGFKKVSTNKNKEQSTNIEQLNILKYAPENNKLLFISNLDNFN CCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCE IVNNNEKDKNPTNKDNFFLIKDSILDYLGIDLDNNKLEDIYNNELIISTFENNKKLKDDI EECCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCE LIVFKIKPEKTIDDLLNLPNKIDQIDEIISINRENKINFLNYIYRTEDNYIIASSDKKLI EEEEEECCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEECCCHHHH KNSINSRNDFKEKKFQYEGELFGLKNQKNILFTKKFRDSIFFNKEILNEGNEDVVATIFD HHHCCCCCHHHHHHHEECCEEEECCCCCCEEEEEHHHHHHHCCHHHHCCCCCCEEEEEEE LKNDNLILKSFLLNSKKNIDILTYDNLINKENTNEDYPEVSIFSDVKNFKQYLKPLTNNF CCCCCEEHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCH ENSFFEDLNQTASQNILILNSKKNWLITFEKNTEDQFDLSAWKKLKDFNKYTLKQNEDIY HHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHH SIYSKDILEEKDDVIKQLTYENIYSIEAGNLKIISNHLIDGKKLDTISKKFYNLKNNKDN HHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCC SAFLYAKVDIKNGNSNKVEYFSDLEDLNFLIRNILKISNEESIEIIRQSIPEKNPILYTE CEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEE TSLKIN CCEEEC >Mature Secondary Structure MKLRVIAIILLLSLLLFFGFKKVSTNKNKEQSTNIEQLNILKYAPENNKLLFISNLDNFN CCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCE IVNNNEKDKNPTNKDNFFLIKDSILDYLGIDLDNNKLEDIYNNELIISTFENNKKLKDDI EECCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCE LIVFKIKPEKTIDDLLNLPNKIDQIDEIISINRENKINFLNYIYRTEDNYIIASSDKKLI EEEEEECCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEECCCHHHH KNSINSRNDFKEKKFQYEGELFGLKNQKNILFTKKFRDSIFFNKEILNEGNEDVVATIFD HHHCCCCCHHHHHHHEECCEEEECCCCCCEEEEEHHHHHHHCCHHHHCCCCCCEEEEEEE LKNDNLILKSFLLNSKKNIDILTYDNLINKENTNEDYPEVSIFSDVKNFKQYLKPLTNNF CCCCCEEHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCH ENSFFEDLNQTASQNILILNSKKNWLITFEKNTEDQFDLSAWKKLKDFNKYTLKQNEDIY HHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHH SIYSKDILEEKDDVIKQLTYENIYSIEAGNLKIISNHLIDGKKLDTISKKFYNLKNNKDN HHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCC SAFLYAKVDIKNGNSNKVEYFSDLEDLNFLIRNILKISNEESIEIIRQSIPEKNPILYTE CEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEE TSLKIN CCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA