| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is dnaC [C]
Identifier: 126701281
GI number: 126701281
Start: 4264158
End: 4265150
Strand: Direct
Name: dnaC [C]
Synonym: CD3654
Alternate gene names: 126701281
Gene position: 4264158-4265150 (Clockwise)
Preceding gene: 126701280
Following gene: 126701297
Centisome position: 99.39
GC content: 26.28
Gene sequence:
>993_bases ATGAATGAGGATAAAATAAGAAAAATACTTGCTAAATATGCTAAGAGAAGAGATGATAATGAACTCTTATTAGAACATAG AAAAAATGAGGTATATAATAGAATCCCTGAGATAAAATCTATAGATGATGAAATTTCTAAAATAGGTCTCAGTTTAGCTA AGATAGTACTTTTAAATCCCAAATCTAAAGATGAAATTGTAAAGAAGACTAAAGAGAATATAGAGTCTTTAAAAGTAAAG AAAGAAAGACTTTTAGCTGAAAGTAACATACCTCTTGATTACTTGGAAATAAAGTTTCAATGTATTTCTTGTAAAGATAA AGGATTTTTACCTAATGGAGAAAAATGTTCTTGCCTCAAACAAGAAATTGTAAATGAAGCTTATAAAATGTCTAATTTAG ATAGGATTTTAAGTCAGGAAAATTTTTCGAATTTTAACTTGAATATATTTTCTCCTAAAAAAGGCTCTGATGGTGAAATA TCTCCTAGAGAAAATATGCTAAATAATTTAAGTATCTGCGAAAATTTTGTTCATGATTTTAAGAAGGATAATAGTGAAAA TCTACTGTTTTATGGTTCTACTGGACTAGGAAAGACCTATATGTGCAATTGTATTGCAAAAGAATTGTTAGATAAAGGCA ATGTTGTAATCTATCAAACTTCTTTTAGAATTTTAGATATTCTTGAAGATTATAAATTTAGAAGAGACACAAATAATCAA ATAAGTGAAGATAATTATAAAAACTTGTTTGATTGTGATTTATTAATAATAGATGACCTTGGAACTGAACTTAATAATTC TTTTACTAGTGGAGAAATCTTCAATATTGTAAATACAAGACTTGTTGCTGGTAAAAAAATCATTATTTCAACCAACTTAA CACCATCTCAAATAGGAAATACTTACACTCAAAGAACTCTCTCTAGAATATTAGATAAGTTTAGAATTTTAGAATTTACT GGAGATGATTTGAGATGGGAAAGATTTAAATAA
Upstream 100 bases:
>100_bases AGTTTCATAATTTCAACGAAACATTCACTCAGTATACCTCTGATGAGCTCGATGAGATTATTAAAAAAAGTCAAAAAGAA AAGTTTAAGTAGGTGATTAA
Downstream 100 bases:
>100_bases AATAGCCCTTAAAAAACATTTTTTTATTTTTAAATAGAGAGGTAAGAGCAAACTTGCTTCTCTGTTTAAAACTTATATCA CATAAATTAAAACATACTTT
Product: DNA replication protein DnaC
Products: NA
Alternate protein names: AAA ATPase; DNA Replication; Aaa ATPase; Chromosomal Replication Initiator DNAa; Replicative DNA Helicase; DNA Replication Protein; Chromosomal Replication Initiator DNAA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MNEDKIRKILAKYAKRRDDNELLLEHRKNEVYNRIPEIKSIDDEISKIGLSLAKIVLLNPKSKDEIVKKTKENIESLKVK KERLLAESNIPLDYLEIKFQCISCKDKGFLPNGEKCSCLKQEIVNEAYKMSNLDRILSQENFSNFNLNIFSPKKGSDGEI SPRENMLNNLSICENFVHDFKKDNSENLLFYGSTGLGKTYMCNCIAKELLDKGNVVIYQTSFRILDILEDYKFRRDTNNQ ISEDNYKNLFDCDLLIIDDLGTELNNSFTSGEIFNIVNTRLVAGKKIIISTNLTPSQIGNTYTQRTLSRILDKFRILEFT GDDLRWERFK
Sequences:
>Translated_330_residues MNEDKIRKILAKYAKRRDDNELLLEHRKNEVYNRIPEIKSIDDEISKIGLSLAKIVLLNPKSKDEIVKKTKENIESLKVK KERLLAESNIPLDYLEIKFQCISCKDKGFLPNGEKCSCLKQEIVNEAYKMSNLDRILSQENFSNFNLNIFSPKKGSDGEI SPRENMLNNLSICENFVHDFKKDNSENLLFYGSTGLGKTYMCNCIAKELLDKGNVVIYQTSFRILDILEDYKFRRDTNNQ ISEDNYKNLFDCDLLIIDDLGTELNNSFTSGEIFNIVNTRLVAGKKIIISTNLTPSQIGNTYTQRTLSRILDKFRILEFT GDDLRWERFK >Mature_330_residues MNEDKIRKILAKYAKRRDDNELLLEHRKNEVYNRIPEIKSIDDEISKIGLSLAKIVLLNPKSKDEIVKKTKENIESLKVK KERLLAESNIPLDYLEIKFQCISCKDKGFLPNGEKCSCLKQEIVNEAYKMSNLDRILSQENFSNFNLNIFSPKKGSDGEI SPRENMLNNLSICENFVHDFKKDNSENLLFYGSTGLGKTYMCNCIAKELLDKGNVVIYQTSFRILDILEDYKFRRDTNNQ ISEDNYKNLFDCDLLIIDDLGTELNNSFTSGEIFNIVNTRLVAGKKIIISTNLTPSQIGNTYTQRTLSRILDKFRILEFT GDDLRWERFK
Specific function: This Protein Is Required For Chromosomal Replication. It Forms, In Concert With DNAb Protein And Other Prepriming Proteins DNAt, N, N', N'' A Prepriming Protein Complex On The Specific Site Of The Template DNA Recognized By Protein N'. [C]
COG id: COG1484
COG function: function code L; DNA replication protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38260; Mature: 38260
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEDKIRKILAKYAKRRDDNELLLEHRKNEVYNRIPEIKSIDDEISKIGLSLAKIVLLNP CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECC KSKDEIVKKTKENIESLKVKKERLLAESNIPLDYLEIKFQCISCKDKGFLPNGEKCSCLK CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCCCCCHHHHHH QEIVNEAYKMSNLDRILSQENFSNFNLNIFSPKKGSDGEISPRENMLNNLSICENFVHDF HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KKDNSENLLFYGSTGLGKTYMCNCIAKELLDKGNVVIYQTSFRILDILEDYKFRRDTNNQ HCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCC ISEDNYKNLFDCDLLIIDDLGTELNNSFTSGEIFNIVNTRLVAGKKIIISTNLTPSQIGN CCCCCCCCEECCCEEEEECCCHHHCCCCCCCHHHHHHHHHEECCCEEEEECCCCHHHHCH TYTQRTLSRILDKFRILEFTGDDLRWERFK HHHHHHHHHHHHHHEEEEECCCCCCCCCCC >Mature Secondary Structure MNEDKIRKILAKYAKRRDDNELLLEHRKNEVYNRIPEIKSIDDEISKIGLSLAKIVLLNP CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECC KSKDEIVKKTKENIESLKVKKERLLAESNIPLDYLEIKFQCISCKDKGFLPNGEKCSCLK CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCCCCCHHHHHH QEIVNEAYKMSNLDRILSQENFSNFNLNIFSPKKGSDGEISPRENMLNNLSICENFVHDF HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KKDNSENLLFYGSTGLGKTYMCNCIAKELLDKGNVVIYQTSFRILDILEDYKFRRDTNNQ HCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCC ISEDNYKNLFDCDLLIIDDLGTELNNSFTSGEIFNIVNTRLVAGKKIIISTNLTPSQIGN CCCCCCCCEECCCEEEEECCCHHHCCCCCCCHHHHHHHHHEECCCEEEEECCCCHHHHCH TYTQRTLSRILDKFRILEFTGDDLRWERFK HHHHHHHHHHHHHHEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA