Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is dnaC [C]

Identifier: 126701281

GI number: 126701281

Start: 4264158

End: 4265150

Strand: Direct

Name: dnaC [C]

Synonym: CD3654

Alternate gene names: 126701281

Gene position: 4264158-4265150 (Clockwise)

Preceding gene: 126701280

Following gene: 126701297

Centisome position: 99.39

GC content: 26.28

Gene sequence:

>993_bases
ATGAATGAGGATAAAATAAGAAAAATACTTGCTAAATATGCTAAGAGAAGAGATGATAATGAACTCTTATTAGAACATAG
AAAAAATGAGGTATATAATAGAATCCCTGAGATAAAATCTATAGATGATGAAATTTCTAAAATAGGTCTCAGTTTAGCTA
AGATAGTACTTTTAAATCCCAAATCTAAAGATGAAATTGTAAAGAAGACTAAAGAGAATATAGAGTCTTTAAAAGTAAAG
AAAGAAAGACTTTTAGCTGAAAGTAACATACCTCTTGATTACTTGGAAATAAAGTTTCAATGTATTTCTTGTAAAGATAA
AGGATTTTTACCTAATGGAGAAAAATGTTCTTGCCTCAAACAAGAAATTGTAAATGAAGCTTATAAAATGTCTAATTTAG
ATAGGATTTTAAGTCAGGAAAATTTTTCGAATTTTAACTTGAATATATTTTCTCCTAAAAAAGGCTCTGATGGTGAAATA
TCTCCTAGAGAAAATATGCTAAATAATTTAAGTATCTGCGAAAATTTTGTTCATGATTTTAAGAAGGATAATAGTGAAAA
TCTACTGTTTTATGGTTCTACTGGACTAGGAAAGACCTATATGTGCAATTGTATTGCAAAAGAATTGTTAGATAAAGGCA
ATGTTGTAATCTATCAAACTTCTTTTAGAATTTTAGATATTCTTGAAGATTATAAATTTAGAAGAGACACAAATAATCAA
ATAAGTGAAGATAATTATAAAAACTTGTTTGATTGTGATTTATTAATAATAGATGACCTTGGAACTGAACTTAATAATTC
TTTTACTAGTGGAGAAATCTTCAATATTGTAAATACAAGACTTGTTGCTGGTAAAAAAATCATTATTTCAACCAACTTAA
CACCATCTCAAATAGGAAATACTTACACTCAAAGAACTCTCTCTAGAATATTAGATAAGTTTAGAATTTTAGAATTTACT
GGAGATGATTTGAGATGGGAAAGATTTAAATAA

Upstream 100 bases:

>100_bases
AGTTTCATAATTTCAACGAAACATTCACTCAGTATACCTCTGATGAGCTCGATGAGATTATTAAAAAAAGTCAAAAAGAA
AAGTTTAAGTAGGTGATTAA

Downstream 100 bases:

>100_bases
AATAGCCCTTAAAAAACATTTTTTTATTTTTAAATAGAGAGGTAAGAGCAAACTTGCTTCTCTGTTTAAAACTTATATCA
CATAAATTAAAACATACTTT

Product: DNA replication protein DnaC

Products: NA

Alternate protein names: AAA ATPase; DNA Replication; Aaa ATPase; Chromosomal Replication Initiator DNAa; Replicative DNA Helicase; DNA Replication Protein; Chromosomal Replication Initiator DNAA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MNEDKIRKILAKYAKRRDDNELLLEHRKNEVYNRIPEIKSIDDEISKIGLSLAKIVLLNPKSKDEIVKKTKENIESLKVK
KERLLAESNIPLDYLEIKFQCISCKDKGFLPNGEKCSCLKQEIVNEAYKMSNLDRILSQENFSNFNLNIFSPKKGSDGEI
SPRENMLNNLSICENFVHDFKKDNSENLLFYGSTGLGKTYMCNCIAKELLDKGNVVIYQTSFRILDILEDYKFRRDTNNQ
ISEDNYKNLFDCDLLIIDDLGTELNNSFTSGEIFNIVNTRLVAGKKIIISTNLTPSQIGNTYTQRTLSRILDKFRILEFT
GDDLRWERFK

Sequences:

>Translated_330_residues
MNEDKIRKILAKYAKRRDDNELLLEHRKNEVYNRIPEIKSIDDEISKIGLSLAKIVLLNPKSKDEIVKKTKENIESLKVK
KERLLAESNIPLDYLEIKFQCISCKDKGFLPNGEKCSCLKQEIVNEAYKMSNLDRILSQENFSNFNLNIFSPKKGSDGEI
SPRENMLNNLSICENFVHDFKKDNSENLLFYGSTGLGKTYMCNCIAKELLDKGNVVIYQTSFRILDILEDYKFRRDTNNQ
ISEDNYKNLFDCDLLIIDDLGTELNNSFTSGEIFNIVNTRLVAGKKIIISTNLTPSQIGNTYTQRTLSRILDKFRILEFT
GDDLRWERFK
>Mature_330_residues
MNEDKIRKILAKYAKRRDDNELLLEHRKNEVYNRIPEIKSIDDEISKIGLSLAKIVLLNPKSKDEIVKKTKENIESLKVK
KERLLAESNIPLDYLEIKFQCISCKDKGFLPNGEKCSCLKQEIVNEAYKMSNLDRILSQENFSNFNLNIFSPKKGSDGEI
SPRENMLNNLSICENFVHDFKKDNSENLLFYGSTGLGKTYMCNCIAKELLDKGNVVIYQTSFRILDILEDYKFRRDTNNQ
ISEDNYKNLFDCDLLIIDDLGTELNNSFTSGEIFNIVNTRLVAGKKIIISTNLTPSQIGNTYTQRTLSRILDKFRILEFT
GDDLRWERFK

Specific function: This Protein Is Required For Chromosomal Replication. It Forms, In Concert With DNAb Protein And Other Prepriming Proteins DNAt, N, N', N'' A Prepriming Protein Complex On The Specific Site Of The Template DNA Recognized By Protein N'. [C]

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38260; Mature: 38260

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEDKIRKILAKYAKRRDDNELLLEHRKNEVYNRIPEIKSIDDEISKIGLSLAKIVLLNP
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECC
KSKDEIVKKTKENIESLKVKKERLLAESNIPLDYLEIKFQCISCKDKGFLPNGEKCSCLK
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCCCCCHHHHHH
QEIVNEAYKMSNLDRILSQENFSNFNLNIFSPKKGSDGEISPRENMLNNLSICENFVHDF
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KKDNSENLLFYGSTGLGKTYMCNCIAKELLDKGNVVIYQTSFRILDILEDYKFRRDTNNQ
HCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCC
ISEDNYKNLFDCDLLIIDDLGTELNNSFTSGEIFNIVNTRLVAGKKIIISTNLTPSQIGN
CCCCCCCCEECCCEEEEECCCHHHCCCCCCCHHHHHHHHHEECCCEEEEECCCCHHHHCH
TYTQRTLSRILDKFRILEFTGDDLRWERFK
HHHHHHHHHHHHHHEEEEECCCCCCCCCCC
>Mature Secondary Structure
MNEDKIRKILAKYAKRRDDNELLLEHRKNEVYNRIPEIKSIDDEISKIGLSLAKIVLLNP
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECC
KSKDEIVKKTKENIESLKVKKERLLAESNIPLDYLEIKFQCISCKDKGFLPNGEKCSCLK
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCCCCCHHHHHH
QEIVNEAYKMSNLDRILSQENFSNFNLNIFSPKKGSDGEISPRENMLNNLSICENFVHDF
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KKDNSENLLFYGSTGLGKTYMCNCIAKELLDKGNVVIYQTSFRILDILEDYKFRRDTNNQ
HCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCC
ISEDNYKNLFDCDLLIIDDLGTELNNSFTSGEIFNIVNTRLVAGKKIIISTNLTPSQIGN
CCCCCCCCEECCCEEEEECCCHHHCCCCCCCHHHHHHHHHEECCCEEEEECCCCHHHHCH
TYTQRTLSRILDKFRILEFTGDDLRWERFK
HHHHHHHHHHHHHHEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA