Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126701297

Identifier: 126701297

GI number: 126701297

Start: 4278618

End: 4279193

Strand: Direct

Name: 126701297

Synonym: CD3669

Alternate gene names: NA

Gene position: 4278618-4279193 (Clockwise)

Preceding gene: 126701281

Following gene: NA

Centisome position: 99.73

GC content: 27.95

Gene sequence:

>576_bases
ATGAAAAATAAGAAAATAATGTTAGTGTTAAGTATATTATCTATATCTATATTCGCAGTTGGTTGTACTAATGCTCAAAA
TGGAAGTGATTCATCTAAAAAAGAAACTAAGAGCAATACAAATGTTGAGCAACCAAAAGAAGAAAACAATACTGAAAAAG
AGGTTCCTAATAACAAAGCTAAACCTACTCCAAAAGAAGAAACTAAAGCTCAATCAGCTACTATTTACTCTTTTGATGTA
GATAAGACAGATTTAATTGAAAATAAAGTTGATTTAAATAAAATTGATGAGAACACTTTATTTGAAGAACTTCAAAAACT
TAAAGTTGTTCCAGAATCTGCAAAATTAAATTCATTTACTACAAAAGACATTGATGGTGTAAAAACTGGTATATTAGATG
TTAGCTCTGACTTTACAAAGTCAAACTTAGGTAGTGATGCAGAAACTTTAATGCTTGATTCAGTTGCTCGTACTTACATA
AAAAATATGAATGTTGAACAAATAAAAATTACTGTTGATGGTTCTAATTACGAAAGTGGTCATATAGTTCTTGAAGAAGG
AGATTACTTAAAGTAA

Upstream 100 bases:

>100_bases
TAAATCATTTTTTAAATTTGTTACTATTTTGTATTCATATATTTGCTCATAACGACTATAATTATATATAAGAATAGTTT
TTAAGAGAGGAGAAATTTTT

Downstream 100 bases:

>100_bases
TTTCTTGAAACTATTATCAAATAGATTAGAGGTTCTTAGGAACCCCTTTTCTTTTTTGTACAAAAAAGGAGATGATTCAA
ATTTTTATTTTGAAATATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKNKKIMLVLSILSISIFAVGCTNAQNGSDSSKKETKSNTNVEQPKEENNTEKEVPNNKAKPTPKEETKAQSATIYSFDV
DKTDLIENKVDLNKIDENTLFEELQKLKVVPESAKLNSFTTKDIDGVKTGILDVSSDFTKSNLGSDAETLMLDSVARTYI
KNMNVEQIKITVDGSNYESGHIVLEEGDYLK

Sequences:

>Translated_191_residues
MKNKKIMLVLSILSISIFAVGCTNAQNGSDSSKKETKSNTNVEQPKEENNTEKEVPNNKAKPTPKEETKAQSATIYSFDV
DKTDLIENKVDLNKIDENTLFEELQKLKVVPESAKLNSFTTKDIDGVKTGILDVSSDFTKSNLGSDAETLMLDSVARTYI
KNMNVEQIKITVDGSNYESGHIVLEEGDYLK
>Mature_191_residues
MKNKKIMLVLSILSISIFAVGCTNAQNGSDSSKKETKSNTNVEQPKEENNTEKEVPNNKAKPTPKEETKAQSATIYSFDV
DKTDLIENKVDLNKIDENTLFEELQKLKVVPESAKLNSFTTKDIDGVKTGILDVSSDFTKSNLGSDAETLMLDSVARTYI
KNMNVEQIKITVDGSNYESGHIVLEEGDYLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21172; Mature: 21172

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKKIMLVLSILSISIFAVGCTNAQNGSDSSKKETKSNTNVEQPKEENNTEKEVPNNKA
CCCCEEEEHHHHHHHHHEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCC
KPTPKEETKAQSATIYSFDVDKTDLIENKVDLNKIDENTLFEELQKLKVVPESAKLNSFT
CCCCHHHHCCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
TKDIDGVKTGILDVSSDFTKSNLGSDAETLMLDSVARTYIKNMNVEQIKITVDGSNYESG
CCCCCCHHHCEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCC
HIVLEEGDYLK
EEEECCCCCCC
>Mature Secondary Structure
MKNKKIMLVLSILSISIFAVGCTNAQNGSDSSKKETKSNTNVEQPKEENNTEKEVPNNKA
CCCCEEEEHHHHHHHHHEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCC
KPTPKEETKAQSATIYSFDVDKTDLIENKVDLNKIDENTLFEELQKLKVVPESAKLNSFT
CCCCHHHHCCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
TKDIDGVKTGILDVSSDFTKSNLGSDAETLMLDSVARTYIKNMNVEQIKITVDGSNYESG
CCCCCCHHHCEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCC
HIVLEEGDYLK
EEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA