| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126701297
Identifier: 126701297
GI number: 126701297
Start: 4278618
End: 4279193
Strand: Direct
Name: 126701297
Synonym: CD3669
Alternate gene names: NA
Gene position: 4278618-4279193 (Clockwise)
Preceding gene: 126701281
Following gene: NA
Centisome position: 99.73
GC content: 27.95
Gene sequence:
>576_bases ATGAAAAATAAGAAAATAATGTTAGTGTTAAGTATATTATCTATATCTATATTCGCAGTTGGTTGTACTAATGCTCAAAA TGGAAGTGATTCATCTAAAAAAGAAACTAAGAGCAATACAAATGTTGAGCAACCAAAAGAAGAAAACAATACTGAAAAAG AGGTTCCTAATAACAAAGCTAAACCTACTCCAAAAGAAGAAACTAAAGCTCAATCAGCTACTATTTACTCTTTTGATGTA GATAAGACAGATTTAATTGAAAATAAAGTTGATTTAAATAAAATTGATGAGAACACTTTATTTGAAGAACTTCAAAAACT TAAAGTTGTTCCAGAATCTGCAAAATTAAATTCATTTACTACAAAAGACATTGATGGTGTAAAAACTGGTATATTAGATG TTAGCTCTGACTTTACAAAGTCAAACTTAGGTAGTGATGCAGAAACTTTAATGCTTGATTCAGTTGCTCGTACTTACATA AAAAATATGAATGTTGAACAAATAAAAATTACTGTTGATGGTTCTAATTACGAAAGTGGTCATATAGTTCTTGAAGAAGG AGATTACTTAAAGTAA
Upstream 100 bases:
>100_bases TAAATCATTTTTTAAATTTGTTACTATTTTGTATTCATATATTTGCTCATAACGACTATAATTATATATAAGAATAGTTT TTAAGAGAGGAGAAATTTTT
Downstream 100 bases:
>100_bases TTTCTTGAAACTATTATCAAATAGATTAGAGGTTCTTAGGAACCCCTTTTCTTTTTTGTACAAAAAAGGAGATGATTCAA ATTTTTATTTTGAAATATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKNKKIMLVLSILSISIFAVGCTNAQNGSDSSKKETKSNTNVEQPKEENNTEKEVPNNKAKPTPKEETKAQSATIYSFDV DKTDLIENKVDLNKIDENTLFEELQKLKVVPESAKLNSFTTKDIDGVKTGILDVSSDFTKSNLGSDAETLMLDSVARTYI KNMNVEQIKITVDGSNYESGHIVLEEGDYLK
Sequences:
>Translated_191_residues MKNKKIMLVLSILSISIFAVGCTNAQNGSDSSKKETKSNTNVEQPKEENNTEKEVPNNKAKPTPKEETKAQSATIYSFDV DKTDLIENKVDLNKIDENTLFEELQKLKVVPESAKLNSFTTKDIDGVKTGILDVSSDFTKSNLGSDAETLMLDSVARTYI KNMNVEQIKITVDGSNYESGHIVLEEGDYLK >Mature_191_residues MKNKKIMLVLSILSISIFAVGCTNAQNGSDSSKKETKSNTNVEQPKEENNTEKEVPNNKAKPTPKEETKAQSATIYSFDV DKTDLIENKVDLNKIDENTLFEELQKLKVVPESAKLNSFTTKDIDGVKTGILDVSSDFTKSNLGSDAETLMLDSVARTYI KNMNVEQIKITVDGSNYESGHIVLEEGDYLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21172; Mature: 21172
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKKIMLVLSILSISIFAVGCTNAQNGSDSSKKETKSNTNVEQPKEENNTEKEVPNNKA CCCCEEEEHHHHHHHHHEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCC KPTPKEETKAQSATIYSFDVDKTDLIENKVDLNKIDENTLFEELQKLKVVPESAKLNSFT CCCCHHHHCCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC TKDIDGVKTGILDVSSDFTKSNLGSDAETLMLDSVARTYIKNMNVEQIKITVDGSNYESG CCCCCCHHHCEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCC HIVLEEGDYLK EEEECCCCCCC >Mature Secondary Structure MKNKKIMLVLSILSISIFAVGCTNAQNGSDSSKKETKSNTNVEQPKEENNTEKEVPNNKA CCCCEEEEHHHHHHHHHEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCC KPTPKEETKAQSATIYSFDVDKTDLIENKVDLNKIDENTLFEELQKLKVVPESAKLNSFT CCCCHHHHCCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC TKDIDGVKTGILDVSSDFTKSNLGSDAETLMLDSVARTYIKNMNVEQIKITVDGSNYESG CCCCCCHHHCEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCC HIVLEEGDYLK EEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA