| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126701244
Identifier: 126701244
GI number: 126701244
Start: 4225000
End: 4225383
Strand: Direct
Name: 126701244
Synonym: CD3618
Alternate gene names: NA
Gene position: 4225000-4225383 (Clockwise)
Preceding gene: 126701239
Following gene: 126701266
Centisome position: 98.48
GC content: 38.54
Gene sequence:
>384_bases TTGGTCATGCTAACTCCATATTTAATATTTAATGGTACTTGTGAAAAAGCATTTAATTTTTATGCTGAGGCTTTCGGAGG AGGAAAAACTATATTTGCGCGATTAGACAGCAATCCAAACAATCCTGTTATGCACGCAAGTGTTACTTTCACAAAATACG AAGGTTGTATAATGGGTGCGGATACAGACAAGCCTGTTGTAATTTCTGGCATGGCGATTTGTGTTGTTCTACCATCTCGA GAAGCGATAGAAGAAATATCTGTAAAACTTGCCGAAGGTGGTACACTTGTACAAGAATTTTTACCACACCCACCACCACA TCAAAATGATGGCGCTGCTGAAGTACTTGATAGGTATGGGTATACTTGGTATTTAAGTACATAG
Upstream 100 bases:
>100_bases AAAATTATATACTTCAAGGTTTCCCTATGATACAATTTACTAAATCATAATTTAGATTATCAGGTGCAACTATAAATTAT TCTATATCAAGGAGGATATA
Downstream 100 bases:
>100_bases TAAAAATAAAAAAACTACATCTAATAATCATAATATAGAACAGATAAATTTCAATTTAATAGTGTAGTAAAAAAGTCGTG TCCTAAGACTGTCACGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MVMLTPYLIFNGTCEKAFNFYAEAFGGGKTIFARLDSNPNNPVMHASVTFTKYEGCIMGADTDKPVVISGMAICVVLPSR EAIEEISVKLAEGGTLVQEFLPHPPPHQNDGAAEVLDRYGYTWYLST
Sequences:
>Translated_127_residues MVMLTPYLIFNGTCEKAFNFYAEAFGGGKTIFARLDSNPNNPVMHASVTFTKYEGCIMGADTDKPVVISGMAICVVLPSR EAIEEISVKLAEGGTLVQEFLPHPPPHQNDGAAEVLDRYGYTWYLST >Mature_127_residues MVMLTPYLIFNGTCEKAFNFYAEAFGGGKTIFARLDSNPNNPVMHASVTFTKYEGCIMGADTDKPVVISGMAICVVLPSR EAIEEISVKLAEGGTLVQEFLPHPPPHQNDGAAEVLDRYGYTWYLST
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13896; Mature: 13896
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMLTPYLIFNGTCEKAFNFYAEAFGGGKTIFARLDSNPNNPVMHASVTFTKYEGCIMGA CEEECCEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEEEEECCEEEEC DTDKPVVISGMAICVVLPSREAIEEISVKLAEGGTLVQEFLPHPPPHQNDGAAEVLDRYG CCCCCEEEECEEEEEEECCHHHHHHHHEEECCCCHHHHHHCCCCCCCCCCCHHHHHHHCC YTWYLST EEEEEEC >Mature Secondary Structure MVMLTPYLIFNGTCEKAFNFYAEAFGGGKTIFARLDSNPNNPVMHASVTFTKYEGCIMGA CEEECCEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEEEEECCEEEEC DTDKPVVISGMAICVVLPSREAIEEISVKLAEGGTLVQEFLPHPPPHQNDGAAEVLDRYG CCCCCEEEECEEEEEEECCHHHHHHHHEEECCCCHHHHHHCCCCCCCCCCCHHHHHHHCC YTWYLST EEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA