| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126700940
Identifier: 126700940
GI number: 126700940
Start: 3886696
End: 3887349
Strand: Direct
Name: 126700940
Synonym: CD3321
Alternate gene names: NA
Gene position: 3886696-3887349 (Clockwise)
Preceding gene: 126700937
Following gene: 126700941
Centisome position: 90.59
GC content: 25.84
Gene sequence:
>654_bases TTGTTTAAATTGGAGGAAAAAATTATGGATGAAAAGATAACAAAAAATAATTATAATGTTCCATTTGACTATGTTCGAAA AAAACTCAAAGAATTAGACCCTCATACAATTAGTAATTTAAGTAATATACCTTTCAATAATGATTTAAATAGATTCACAC TCAATTTTTTTGATAGACAATATATTATAGACTATCCAAGTGGAGAAGTTTGGAATAGTAATGGTAGCCTTTGCAATAAC TTTGAGCTTAAAATCTTGATAGTTAGATATTTAATCAATGCTAAAGGTATTCCTAGAACTAATAAATATGTAACTTTTAA AGAAATACCAGGAGGCAATGTTTATTATCCAAATTTTTTAAACAGGACTCTATATAGGCTTTCAGAAGTTTTTACATCTC AAATAGACAAATATAAGTTAGTTATGGAGAAAATTGGAGCTGAAAAAGTAAACATGGGAGATTTAGCTTATAGGTTTACA TATATGGGTAATACATCTATGGTATTTATACTTTGGTTTGGAGATGATGAATTTCCTCCAAATTCAAATATATTATTTGA TTCTAATATAGTTTATTACTTCAATGCAGAAGATTTAGCAGTTGTTCCTGATACAGCTATAAATGCAATTTTAAATAAAA TAAATCAATTATAA
Upstream 100 bases:
>100_bases TTACTTAAATATAAAAATTTATTTAACAATTTATTATTGTAATATTTTGAATATATAATAAAATTAATAATAAGAAAACT TTTTATAAATATACTTTTAA
Downstream 100 bases:
>100_bases ATATAAATAATATTATAATAAAGTTTTTGATAGATTTAATAGAATATAATATGAAATGGAGTAAAAAATGAATGTAGAAA ATCAATCTTTATCAGATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MFKLEEKIMDEKITKNNYNVPFDYVRKKLKELDPHTISNLSNIPFNNDLNRFTLNFFDRQYIIDYPSGEVWNSNGSLCNN FELKILIVRYLINAKGIPRTNKYVTFKEIPGGNVYYPNFLNRTLYRLSEVFTSQIDKYKLVMEKIGAEKVNMGDLAYRFT YMGNTSMVFILWFGDDEFPPNSNILFDSNIVYYFNAEDLAVVPDTAINAILNKINQL
Sequences:
>Translated_217_residues MFKLEEKIMDEKITKNNYNVPFDYVRKKLKELDPHTISNLSNIPFNNDLNRFTLNFFDRQYIIDYPSGEVWNSNGSLCNN FELKILIVRYLINAKGIPRTNKYVTFKEIPGGNVYYPNFLNRTLYRLSEVFTSQIDKYKLVMEKIGAEKVNMGDLAYRFT YMGNTSMVFILWFGDDEFPPNSNILFDSNIVYYFNAEDLAVVPDTAINAILNKINQL >Mature_217_residues MFKLEEKIMDEKITKNNYNVPFDYVRKKLKELDPHTISNLSNIPFNNDLNRFTLNFFDRQYIIDYPSGEVWNSNGSLCNN FELKILIVRYLINAKGIPRTNKYVTFKEIPGGNVYYPNFLNRTLYRLSEVFTSQIDKYKLVMEKIGAEKVNMGDLAYRFT YMGNTSMVFILWFGDDEFPPNSNILFDSNIVYYFNAEDLAVVPDTAINAILNKINQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25434; Mature: 25434
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKLEEKIMDEKITKNNYNVPFDYVRKKLKELDPHTISNLSNIPFNNDLNRFTLNFFDRQ CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEEECCCE YIIDYPSGEVWNSNGSLCNNFELKILIVRYLINAKGIPRTNKYVTFKEIPGGNVYYPNFL EEEECCCCCEECCCCCEECCCCHHHHEEHHHHCCCCCCCCCCEEEEEECCCCCEECCHHH NRTLYRLSEVFTSQIDKYKLVMEKIGAEKVNMGDLAYRFTYMGNTSMVFILWFGDDEFPP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCC NSNILFDSNIVYYFNAEDLAVVPDTAINAILNKINQL CCCEEEECCEEEEECCCCEEECCHHHHHHHHHHHHCC >Mature Secondary Structure MFKLEEKIMDEKITKNNYNVPFDYVRKKLKELDPHTISNLSNIPFNNDLNRFTLNFFDRQ CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEEECCCE YIIDYPSGEVWNSNGSLCNNFELKILIVRYLINAKGIPRTNKYVTFKEIPGGNVYYPNFL EEEECCCCCEECCCCCEECCCCHHHHEEHHHHCCCCCCCCCCEEEEEECCCCCEECCHHH NRTLYRLSEVFTSQIDKYKLVMEKIGAEKVNMGDLAYRFTYMGNTSMVFILWFGDDEFPP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCC NSNILFDSNIVYYFNAEDLAVVPDTAINAILNKINQL CCCEEEECCEEEEECCCCEEECCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA