Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126700941

Identifier: 126700941

GI number: 126700941

Start: 3887417

End: 3888250

Strand: Direct

Name: 126700941

Synonym: CD3322

Alternate gene names: NA

Gene position: 3887417-3888250 (Clockwise)

Preceding gene: 126700940

Following gene: 126700949

Centisome position: 90.61

GC content: 32.37

Gene sequence:

>834_bases
ATGAATGTAGAAAATCAATCTTTATCAGATATTGAAATAATATTATCACACAGGTATGATAATGGTGCAGACTATTGGAC
TACACCTGATAAGCGTTTAATAAAAGGTTCTCCTTTCTCTACTCTTGATAGTGTACTTTATCTATTAGAATTAGGTGTGA
ACCCTGATGATACTTTACTTAAAGAATGTGCTGACCTGATATTTAGCACATGGCGAGAAGATGGACGTTTCAAACTATAT
CCAAATGGAGGTATTTACCCTTGTCATACTGCAAATGCTGCTAACGTACTCTGTCATATGGGATATGCATCTGACATTAG
AATGCAAAAAACGTTTCAACATTTTTTAGATACACAGTATACTGATGGTGGGTGGCGTTGCAATAAATTTAGTTTTGGTC
GAGGTCCAGAAACTGAATACTCAAATCCACTACCAACTCTTAATATATTAAATGCATTCCGTTTTAGTAATTATCTAAAT
AAAGAATCAAAACTTGACAAAGCTGTAGATTTTCTACTTGACCATTGGACTATTAAAAAACCAATCGGCCCTTGTCACTA
TGGAATTGGCACATTATTTATGCAAGTTGAATATCCTTTCCGTAATTATAATCTATTCCTTTATGTCTACGTTTTATCAT
TTTATAGTCGTGCAAAAAAGGATAAGAGATTTTTAGAAGCATTGAAGATACTTGAATCTAAAATGATAGGTAATAAAATT
GTCGTTGAACGTGTAGTTCCAAAACTATCCAAATTATCTTTTTGTAAAAAAGGCGAGTCAAGTGAAATAGCCACAACACA
CTATTACGAAATATTAAAAAACCTAGACAAATAA

Upstream 100 bases:

>100_bases
AATGCAATTTTAAATAAAATAAATCAATTATAAATATAAATAATATTATAATAAAGTTTTTGATAGATTTAATAGAATAT
AATATGAAATGGAGTAAAAA

Downstream 100 bases:

>100_bases
TAGTTATATAGATAAAACATATTAAAAAATAGTGGCTTTAAATTTTTTAAAGTCACTATTTTTTTAAATGATGTTCCTGA
AAATATATTAAGTTAGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MNVENQSLSDIEIILSHRYDNGADYWTTPDKRLIKGSPFSTLDSVLYLLELGVNPDDTLLKECADLIFSTWREDGRFKLY
PNGGIYPCHTANAANVLCHMGYASDIRMQKTFQHFLDTQYTDGGWRCNKFSFGRGPETEYSNPLPTLNILNAFRFSNYLN
KESKLDKAVDFLLDHWTIKKPIGPCHYGIGTLFMQVEYPFRNYNLFLYVYVLSFYSRAKKDKRFLEALKILESKMIGNKI
VVERVVPKLSKLSFCKKGESSEIATTHYYEILKNLDK

Sequences:

>Translated_277_residues
MNVENQSLSDIEIILSHRYDNGADYWTTPDKRLIKGSPFSTLDSVLYLLELGVNPDDTLLKECADLIFSTWREDGRFKLY
PNGGIYPCHTANAANVLCHMGYASDIRMQKTFQHFLDTQYTDGGWRCNKFSFGRGPETEYSNPLPTLNILNAFRFSNYLN
KESKLDKAVDFLLDHWTIKKPIGPCHYGIGTLFMQVEYPFRNYNLFLYVYVLSFYSRAKKDKRFLEALKILESKMIGNKI
VVERVVPKLSKLSFCKKGESSEIATTHYYEILKNLDK
>Mature_277_residues
MNVENQSLSDIEIILSHRYDNGADYWTTPDKRLIKGSPFSTLDSVLYLLELGVNPDDTLLKECADLIFSTWREDGRFKLY
PNGGIYPCHTANAANVLCHMGYASDIRMQKTFQHFLDTQYTDGGWRCNKFSFGRGPETEYSNPLPTLNILNAFRFSNYLN
KESKLDKAVDFLLDHWTIKKPIGPCHYGIGTLFMQVEYPFRNYNLFLYVYVLSFYSRAKKDKRFLEALKILESKMIGNKI
VVERVVPKLSKLSFCKKGESSEIATTHYYEILKNLDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32075; Mature: 32075

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVENQSLSDIEIILSHRYDNGADYWTTPDKRLIKGSPFSTLDSVLYLLELGVNPDDTLL
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCCCHHHH
KECADLIFSTWREDGRFKLYPNGGIYPCHTANAANVLCHMGYASDIRMQKTFQHFLDTQY
HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHEECCCHHHHHHHHHHHHHHCCCC
TDGGWRCNKFSFGRGPETEYSNPLPTLNILNAFRFSNYLNKESKLDKAVDFLLDHWTIKK
CCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHCC
PIGPCHYGIGTLFMQVEYPFRNYNLFLYVYVLSFYSRAKKDKRFLEALKILESKMIGNKI
CCCCHHHCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VVERVVPKLSKLSFCKKGESSEIATTHYYEILKNLDK
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNVENQSLSDIEIILSHRYDNGADYWTTPDKRLIKGSPFSTLDSVLYLLELGVNPDDTLL
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCCCHHHH
KECADLIFSTWREDGRFKLYPNGGIYPCHTANAANVLCHMGYASDIRMQKTFQHFLDTQY
HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHEECCCHHHHHHHHHHHHHHCCCC
TDGGWRCNKFSFGRGPETEYSNPLPTLNILNAFRFSNYLNKESKLDKAVDFLLDHWTIKK
CCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHCC
PIGPCHYGIGTLFMQVEYPFRNYNLFLYVYVLSFYSRAKKDKRFLEALKILESKMIGNKI
CCCCHHHCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VVERVVPKLSKLSFCKKGESSEIATTHYYEILKNLDK
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA