| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126700941
Identifier: 126700941
GI number: 126700941
Start: 3887417
End: 3888250
Strand: Direct
Name: 126700941
Synonym: CD3322
Alternate gene names: NA
Gene position: 3887417-3888250 (Clockwise)
Preceding gene: 126700940
Following gene: 126700949
Centisome position: 90.61
GC content: 32.37
Gene sequence:
>834_bases ATGAATGTAGAAAATCAATCTTTATCAGATATTGAAATAATATTATCACACAGGTATGATAATGGTGCAGACTATTGGAC TACACCTGATAAGCGTTTAATAAAAGGTTCTCCTTTCTCTACTCTTGATAGTGTACTTTATCTATTAGAATTAGGTGTGA ACCCTGATGATACTTTACTTAAAGAATGTGCTGACCTGATATTTAGCACATGGCGAGAAGATGGACGTTTCAAACTATAT CCAAATGGAGGTATTTACCCTTGTCATACTGCAAATGCTGCTAACGTACTCTGTCATATGGGATATGCATCTGACATTAG AATGCAAAAAACGTTTCAACATTTTTTAGATACACAGTATACTGATGGTGGGTGGCGTTGCAATAAATTTAGTTTTGGTC GAGGTCCAGAAACTGAATACTCAAATCCACTACCAACTCTTAATATATTAAATGCATTCCGTTTTAGTAATTATCTAAAT AAAGAATCAAAACTTGACAAAGCTGTAGATTTTCTACTTGACCATTGGACTATTAAAAAACCAATCGGCCCTTGTCACTA TGGAATTGGCACATTATTTATGCAAGTTGAATATCCTTTCCGTAATTATAATCTATTCCTTTATGTCTACGTTTTATCAT TTTATAGTCGTGCAAAAAAGGATAAGAGATTTTTAGAAGCATTGAAGATACTTGAATCTAAAATGATAGGTAATAAAATT GTCGTTGAACGTGTAGTTCCAAAACTATCCAAATTATCTTTTTGTAAAAAAGGCGAGTCAAGTGAAATAGCCACAACACA CTATTACGAAATATTAAAAAACCTAGACAAATAA
Upstream 100 bases:
>100_bases AATGCAATTTTAAATAAAATAAATCAATTATAAATATAAATAATATTATAATAAAGTTTTTGATAGATTTAATAGAATAT AATATGAAATGGAGTAAAAA
Downstream 100 bases:
>100_bases TAGTTATATAGATAAAACATATTAAAAAATAGTGGCTTTAAATTTTTTAAAGTCACTATTTTTTTAAATGATGTTCCTGA AAATATATTAAGTTAGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MNVENQSLSDIEIILSHRYDNGADYWTTPDKRLIKGSPFSTLDSVLYLLELGVNPDDTLLKECADLIFSTWREDGRFKLY PNGGIYPCHTANAANVLCHMGYASDIRMQKTFQHFLDTQYTDGGWRCNKFSFGRGPETEYSNPLPTLNILNAFRFSNYLN KESKLDKAVDFLLDHWTIKKPIGPCHYGIGTLFMQVEYPFRNYNLFLYVYVLSFYSRAKKDKRFLEALKILESKMIGNKI VVERVVPKLSKLSFCKKGESSEIATTHYYEILKNLDK
Sequences:
>Translated_277_residues MNVENQSLSDIEIILSHRYDNGADYWTTPDKRLIKGSPFSTLDSVLYLLELGVNPDDTLLKECADLIFSTWREDGRFKLY PNGGIYPCHTANAANVLCHMGYASDIRMQKTFQHFLDTQYTDGGWRCNKFSFGRGPETEYSNPLPTLNILNAFRFSNYLN KESKLDKAVDFLLDHWTIKKPIGPCHYGIGTLFMQVEYPFRNYNLFLYVYVLSFYSRAKKDKRFLEALKILESKMIGNKI VVERVVPKLSKLSFCKKGESSEIATTHYYEILKNLDK >Mature_277_residues MNVENQSLSDIEIILSHRYDNGADYWTTPDKRLIKGSPFSTLDSVLYLLELGVNPDDTLLKECADLIFSTWREDGRFKLY PNGGIYPCHTANAANVLCHMGYASDIRMQKTFQHFLDTQYTDGGWRCNKFSFGRGPETEYSNPLPTLNILNAFRFSNYLN KESKLDKAVDFLLDHWTIKKPIGPCHYGIGTLFMQVEYPFRNYNLFLYVYVLSFYSRAKKDKRFLEALKILESKMIGNKI VVERVVPKLSKLSFCKKGESSEIATTHYYEILKNLDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32075; Mature: 32075
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVENQSLSDIEIILSHRYDNGADYWTTPDKRLIKGSPFSTLDSVLYLLELGVNPDDTLL CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCCCHHHH KECADLIFSTWREDGRFKLYPNGGIYPCHTANAANVLCHMGYASDIRMQKTFQHFLDTQY HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHEECCCHHHHHHHHHHHHHHCCCC TDGGWRCNKFSFGRGPETEYSNPLPTLNILNAFRFSNYLNKESKLDKAVDFLLDHWTIKK CCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHCC PIGPCHYGIGTLFMQVEYPFRNYNLFLYVYVLSFYSRAKKDKRFLEALKILESKMIGNKI CCCCHHHCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH VVERVVPKLSKLSFCKKGESSEIATTHYYEILKNLDK HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNVENQSLSDIEIILSHRYDNGADYWTTPDKRLIKGSPFSTLDSVLYLLELGVNPDDTLL CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCCCHHHH KECADLIFSTWREDGRFKLYPNGGIYPCHTANAANVLCHMGYASDIRMQKTFQHFLDTQY HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHEECCCHHHHHHHHHHHHHHCCCC TDGGWRCNKFSFGRGPETEYSNPLPTLNILNAFRFSNYLNKESKLDKAVDFLLDHWTIKK CCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHCC PIGPCHYGIGTLFMQVEYPFRNYNLFLYVYVLSFYSRAKKDKRFLEALKILESKMIGNKI CCCCHHHCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH VVERVVPKLSKLSFCKKGESSEIATTHYYEILKNLDK HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA