| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126700767
Identifier: 126700767
GI number: 126700767
Start: 3678459
End: 3680372
Strand: Direct
Name: 126700767
Synonym: CD3150
Alternate gene names: NA
Gene position: 3678459-3680372 (Clockwise)
Preceding gene: 126700766
Following gene: 126700771
Centisome position: 85.74
GC content: 29.83
Gene sequence:
>1914_bases ATGTCTATAAAATTAGATGATAAAACTCATAATTTAAGAATAAATCAAGCTACAAGTGTTTTTGGACCAGGAGCTATGCT AGATTTTATTGATCAAACATTAATGACTGCTCATCCAAATTATTGGACTAATACAATTAAAATACAAGATGATAGGCTTC AGGCTACATTGAGGGTTAATGAACTAAGAACACCTCCAACTATAGATGATAGATCTTCTGTTCCTTTTGTTAGGTTTCCT AGATGGTACTTTTGTCCAAAATGTAGAAAATTTATGCCTATAGAAGATTGGGAGAAACTTTATAAAAATGCTCATAAAGA TAAACCTATGAAAATACCTATTTGCCTTACTTGTAGCACAAAAAAGTCTACTAAACAATTAGTACCTACTGGTATAATTA CTATTTGTGAACATGGTCATATTGATGATTTTCCATGGGTAAAATGGGTTCATTTTAGAAATAAATCTGGAAGAAAAGAA ATTTGTGAAAATCCTCAAATATTAATGAAGACTGGAAAAAGTAACCTAGGATTAGAAGGTATAGAACTTGAATGTAGCTG TGGAGCTAAAGCTAATATGAAGGGCGCATTTATGCGTTTAAAATCTTCTAAATCTAATGATTATGGTGTACCTAGTGAAT ATAAGGAAATGTTTAAATGCTCTGGTAATTCGCCTTGGTATAATAAAAAAGTAAATAAATGCACTAAATATTCATTTGCT TCTCAAAGAGGTGCCTCTAATGTATATTATCCTAAGATAGAAAGTTCAATTATTATACCACCATACTCTGATACTCTTAA TTCTAAAGTGCTATCTAGTAAAGGTTATGATACATTTAAGAAATTCTTAGATCGTGCTATTAAAAAGAATAAGTTAGAAC GCTTTATGGATGAGGATTTTGAGGACTTTGCCAGTGATATTGCTAAAGAAACAGGTTTTGATACTGATAAAGTATCCATA GTTTTGAAAGATTTATTGCCTTTTGAAGATTCTTCACCATCAACAACAACTAGAAATCAATATAGAGAAGAAGAATATGA GGCTTTAATTGGAAATATAGATGCTAAATCTAAAAAAACTAATGACTTTACAATAGAAGAACAAAATCTATCTGATTATG ATATTCCAAACTTCAGTAAAATAGTGTTAGTAAAAAGACTTAGAGAAGTAAGGGCATTAACTGGGTTTAGTAGAGTCAAT CCACCTGATAATAATATATTTGGTGAAGAAGATATAGATGATAGCTGTAATGATACTAAGGTTATAAGTTTAAGATCTAG AGATTGTAAAAAATCTTTTTATCCTGCATCTGAGGTTAGAGGTGAAGGTATTTTCATAGAGATAAATAATGATATGGTAA AAAGCTGGATTTCATCTAATCCTAAAATACAGGATAATGCATCTATTTTAAATTCTAGATATAATAAAGATATTAATGTT AATGACAAAGCTTATAGAAAAATTACACCTAAATTCTTATTACTACATACTTTAGCTCATTTAATTATAAGAGAACTTAG TTTTGTTTGTGGATATGCTACCTCTTCACTTAGGGAACGTATATATTGTAATAATTCCGAAAATGAAAAAGTTATGTCTG GAATTTTAGTTTACACTGCAAGTGGTGACTCTGAAGGTACTTTAGGAGGATTAGTTAGGCAAGGTATGCATGATTCATTA CCATCTATATTAAATAGTGCTCTTAATCGTGCTCTTTGGTGTTCTAATGACCCAATATGTATTGATAGTACTGGTCAAGG TAGAAATTCTTTAAATCTAGGAGCATGCCATTCATGTACTTTATTGCCTGAAACTAGCTGTGAGGAGTATAATTTATTAC TTGATAGAAGCATGTTAATTGGTGATATGGATAATAGAGATATTGGGTTCTTTAAAAATCTAATTTTAATTTAG
Upstream 100 bases:
>100_bases GATAAGGATGTTATTACAAATGAAAAACAAACATTAAATTCTATGAGAAATGTTGATAAACAATGTACTGTTGAAATTAT AGAATTGGAGGAAAATTAAT
Downstream 100 bases:
>100_bases TAATAACTAATTTTTTATTTATATAACTAAAGGTTAAAAGTTAATTTTATGACTTCTATCCTTTAGTTTTTTGTATTTAA ATTATTATTTTTTGCAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 637; Mature: 636
Protein sequence:
>637_residues MSIKLDDKTHNLRINQATSVFGPGAMLDFIDQTLMTAHPNYWTNTIKIQDDRLQATLRVNELRTPPTIDDRSSVPFVRFP RWYFCPKCRKFMPIEDWEKLYKNAHKDKPMKIPICLTCSTKKSTKQLVPTGIITICEHGHIDDFPWVKWVHFRNKSGRKE ICENPQILMKTGKSNLGLEGIELECSCGAKANMKGAFMRLKSSKSNDYGVPSEYKEMFKCSGNSPWYNKKVNKCTKYSFA SQRGASNVYYPKIESSIIIPPYSDTLNSKVLSSKGYDTFKKFLDRAIKKNKLERFMDEDFEDFASDIAKETGFDTDKVSI VLKDLLPFEDSSPSTTTRNQYREEEYEALIGNIDAKSKKTNDFTIEEQNLSDYDIPNFSKIVLVKRLREVRALTGFSRVN PPDNNIFGEEDIDDSCNDTKVISLRSRDCKKSFYPASEVRGEGIFIEINNDMVKSWISSNPKIQDNASILNSRYNKDINV NDKAYRKITPKFLLLHTLAHLIIRELSFVCGYATSSLRERIYCNNSENEKVMSGILVYTASGDSEGTLGGLVRQGMHDSL PSILNSALNRALWCSNDPICIDSTGQGRNSLNLGACHSCTLLPETSCEEYNLLLDRSMLIGDMDNRDIGFFKNLILI
Sequences:
>Translated_637_residues MSIKLDDKTHNLRINQATSVFGPGAMLDFIDQTLMTAHPNYWTNTIKIQDDRLQATLRVNELRTPPTIDDRSSVPFVRFP RWYFCPKCRKFMPIEDWEKLYKNAHKDKPMKIPICLTCSTKKSTKQLVPTGIITICEHGHIDDFPWVKWVHFRNKSGRKE ICENPQILMKTGKSNLGLEGIELECSCGAKANMKGAFMRLKSSKSNDYGVPSEYKEMFKCSGNSPWYNKKVNKCTKYSFA SQRGASNVYYPKIESSIIIPPYSDTLNSKVLSSKGYDTFKKFLDRAIKKNKLERFMDEDFEDFASDIAKETGFDTDKVSI VLKDLLPFEDSSPSTTTRNQYREEEYEALIGNIDAKSKKTNDFTIEEQNLSDYDIPNFSKIVLVKRLREVRALTGFSRVN PPDNNIFGEEDIDDSCNDTKVISLRSRDCKKSFYPASEVRGEGIFIEINNDMVKSWISSNPKIQDNASILNSRYNKDINV NDKAYRKITPKFLLLHTLAHLIIRELSFVCGYATSSLRERIYCNNSENEKVMSGILVYTASGDSEGTLGGLVRQGMHDSL PSILNSALNRALWCSNDPICIDSTGQGRNSLNLGACHSCTLLPETSCEEYNLLLDRSMLIGDMDNRDIGFFKNLILI >Mature_636_residues SIKLDDKTHNLRINQATSVFGPGAMLDFIDQTLMTAHPNYWTNTIKIQDDRLQATLRVNELRTPPTIDDRSSVPFVRFPR WYFCPKCRKFMPIEDWEKLYKNAHKDKPMKIPICLTCSTKKSTKQLVPTGIITICEHGHIDDFPWVKWVHFRNKSGRKEI CENPQILMKTGKSNLGLEGIELECSCGAKANMKGAFMRLKSSKSNDYGVPSEYKEMFKCSGNSPWYNKKVNKCTKYSFAS QRGASNVYYPKIESSIIIPPYSDTLNSKVLSSKGYDTFKKFLDRAIKKNKLERFMDEDFEDFASDIAKETGFDTDKVSIV LKDLLPFEDSSPSTTTRNQYREEEYEALIGNIDAKSKKTNDFTIEEQNLSDYDIPNFSKIVLVKRLREVRALTGFSRVNP PDNNIFGEEDIDDSCNDTKVISLRSRDCKKSFYPASEVRGEGIFIEINNDMVKSWISSNPKIQDNASILNSRYNKDINVN DKAYRKITPKFLLLHTLAHLIIRELSFVCGYATSSLRERIYCNNSENEKVMSGILVYTASGDSEGTLGGLVRQGMHDSLP SILNSALNRALWCSNDPICIDSTGQGRNSLNLGACHSCTLLPETSCEEYNLLLDRSMLIGDMDNRDIGFFKNLILI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72531; Mature: 72400
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKLDDKTHNLRINQATSVFGPGAMLDFIDQTLMTAHPNYWTNTIKIQDDRLQATLRVN CCEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEE ELRTPPTIDDRSSVPFVRFPRWYFCPKCRKFMPIEDWEKLYKNAHKDKPMKIPICLTCST CCCCCCCCCCCCCCCEEECCCEEECHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECC KKSTKQLVPTGIITICEHGHIDDFPWVKWVHFRNKSGRKEICENPQILMKTGKSNLGLEG CCHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCCCCCHHHHCCCCEEEECCCCCCCCCC IELECSCGAKANMKGAFMRLKSSKSNDYGVPSEYKEMFKCSGNSPWYNKKVNKCTKYSFA EEEEECCCCCCCCCHHHHEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH SQRGASNVYYPKIESSIIIPPYSDTLNSKVLSSKGYDTFKKFLDRAIKKNKLERFMDEDF HHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH EDFASDIAKETGFDTDKVSIVLKDLLPFEDSSPSTTTRNQYREEEYEALIGNIDAKSKKT HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC NDFTIEEQNLSDYDIPNFSKIVLVKRLREVRALTGFSRVNPPDNNIFGEEDIDDSCNDTK CCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCE VISLRSRDCKKSFYPASEVRGEGIFIEINNDMVKSWISSNPKIQDNASILNSRYNKDINV EEEECCCHHHHHCCCHHHHCCCEEEEEECHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCC NDKAYRKITPKFLLLHTLAHLIIRELSFVCGYATSSLRERIYCNNSENEKVMSGILVYTA CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHEEEEEEEEEE SGDSEGTLGGLVRQGMHDSLPSILNSALNRALWCSNDPICIDSTGQGRNSLNLGACHSCT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCEEEECCCCCCCCCCCCCCCCEE LLPETSCEEYNLLLDRSMLIGDMDNRDIGFFKNLILI ECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCC >Mature Secondary Structure SIKLDDKTHNLRINQATSVFGPGAMLDFIDQTLMTAHPNYWTNTIKIQDDRLQATLRVN CEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEE ELRTPPTIDDRSSVPFVRFPRWYFCPKCRKFMPIEDWEKLYKNAHKDKPMKIPICLTCST CCCCCCCCCCCCCCCEEECCCEEECHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECC KKSTKQLVPTGIITICEHGHIDDFPWVKWVHFRNKSGRKEICENPQILMKTGKSNLGLEG CCHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCCCCCHHHHCCCCEEEECCCCCCCCCC IELECSCGAKANMKGAFMRLKSSKSNDYGVPSEYKEMFKCSGNSPWYNKKVNKCTKYSFA EEEEECCCCCCCCCHHHHEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH SQRGASNVYYPKIESSIIIPPYSDTLNSKVLSSKGYDTFKKFLDRAIKKNKLERFMDEDF HHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH EDFASDIAKETGFDTDKVSIVLKDLLPFEDSSPSTTTRNQYREEEYEALIGNIDAKSKKT HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC NDFTIEEQNLSDYDIPNFSKIVLVKRLREVRALTGFSRVNPPDNNIFGEEDIDDSCNDTK CCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCE VISLRSRDCKKSFYPASEVRGEGIFIEINNDMVKSWISSNPKIQDNASILNSRYNKDINV EEEECCCHHHHHCCCHHHHCCCEEEEEECHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCC NDKAYRKITPKFLLLHTLAHLIIRELSFVCGYATSSLRERIYCNNSENEKVMSGILVYTA CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHEEEEEEEEEE SGDSEGTLGGLVRQGMHDSLPSILNSALNRALWCSNDPICIDSTGQGRNSLNLGACHSCT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCEEEECCCCCCCCCCCCCCCCEE LLPETSCEEYNLLLDRSMLIGDMDNRDIGFFKNLILI ECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA