| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is pfp [H]
Identifier: 126700727
GI number: 126700727
Start: 3618638
End: 3619852
Strand: Direct
Name: pfp [H]
Synonym: CD3110
Alternate gene names: 126700727
Gene position: 3618638-3619852 (Clockwise)
Preceding gene: 126700724
Following gene: 126700728
Centisome position: 84.35
GC content: 28.81
Gene sequence:
>1215_bases ATGAGAAACTGTATTATTGCCCAATCTGGAGGCCCTACAGCTGTTATCAATGCTTCTGCAGTTGGTATTTATGAAAAAAA TTTAGAAACTAAATACTTTGATAAAGTATATTTTGGTATCAATGGGATTGAAGGTATATTAAACAAAAATATAATAGATT CAGACTCCTTAAACAAAGATAATGTATTAAATTTAAAGCAAACACCTTCGTCTGGTCTTGGTTCTTGTAGATACAAACTG GCTGATTATAAAATAAATTCTTATGATTATGATAGAGTTATAAATATACTAGATGAATATGAAATAGATACATTATTTTA TATAGGCGGAAATGATTCTATGGACACAGTGATGAAATTTTCTCAATACTGCAAAAACACTACTTGTAAAATAAAATTTA TAGGTATTCCTAAAACAATAGATAATGATTTATTAGGAACTGACAACTGTCCTGGATTTGGTTCTGCTGCAAAGCTTATT TCTACACTAATAATGGAAACATACTTAGATTTTTCTATATACAAAAATAATGGTATATTTATAGTAGAAACTATGGGTAG AGATACTGGATGGTTAGCAGCTTCTTCTTCACTAGCTAGACTTAATGATACTCCACTTGTTGATTTAATATACCTTCCAG AAATTGATTTCTATGAAGATAAGTTTATAGAAGATGTTAGAAAAATATTTAAAGAAAAAAATAAGGCTTATATAGTTGCA TCAGAAGGTATAAGGGATAAATACGGCAACTTTATATGCGAACAAAAAACTTCTGCTCATGATAAATTTGGTCATTCCCA ATTAGGTGGAGTAAGCAACTATCTAAAGAATCTTATAGTATCATCATCAATTACAACAAGAGTAAAAACCTTAGAACTTG GTGTAATACAAAGATGTGCTATGCATTTAGCTTCAGATACTGATTTAAAACAAGCAGCTGAAGTTGGTGCATATGGGATA GAACTATCTAAAAAAGGATATACAGGAGTTATGGCTATCATTAATAGAACATGCAATAATCCTTATAAGTATGAAGTTAG TCATACTGATATTTCTAAAATAGCTAACAAGACAAAATATTTTCCTAAAGAGTGGATAAATGAAGAATGTAATTATATAA CTGATGAAGCCCTAAATTATCTATATCCACTTATTCAAGGTAAACCAGATATCAAATATAAAAATGGACTACCTTATTTT TCAATTATTTACTAG
Upstream 100 bases:
>100_bases TGATATAGCTAGTTCATTTAATATATAATCAGACTATAAATATAAATTTACTCGATAAAAAGTACCATTCATAACAATAT TAATGAAAGGGAGATGTAAA
Downstream 100 bases:
>100_bases GAAATTATTATAATTTGATATACACTCAATTCTATCGCTCTTAAATACCTAAGTGGCTGTTAAATAAAATTATAAATTGT TATATGACAGTCACTTAATC
Product: 6-phosphofructokinase
Products: NA
Alternate protein names: 6-phosphofructokinase, pyrophosphate dependent; PPi-dependent phosphofructokinase; PPi-PFK; Pyrophosphate-dependent 6-phosphofructose-1-kinase [H]
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MRNCIIAQSGGPTAVINASAVGIYEKNLETKYFDKVYFGINGIEGILNKNIIDSDSLNKDNVLNLKQTPSSGLGSCRYKL ADYKINSYDYDRVINILDEYEIDTLFYIGGNDSMDTVMKFSQYCKNTTCKIKFIGIPKTIDNDLLGTDNCPGFGSAAKLI STLIMETYLDFSIYKNNGIFIVETMGRDTGWLAASSSLARLNDTPLVDLIYLPEIDFYEDKFIEDVRKIFKEKNKAYIVA SEGIRDKYGNFICEQKTSAHDKFGHSQLGGVSNYLKNLIVSSSITTRVKTLELGVIQRCAMHLASDTDLKQAAEVGAYGI ELSKKGYTGVMAIINRTCNNPYKYEVSHTDISKIANKTKYFPKEWINEECNYITDEALNYLYPLIQGKPDIKYKNGLPYF SIIY
Sequences:
>Translated_404_residues MRNCIIAQSGGPTAVINASAVGIYEKNLETKYFDKVYFGINGIEGILNKNIIDSDSLNKDNVLNLKQTPSSGLGSCRYKL ADYKINSYDYDRVINILDEYEIDTLFYIGGNDSMDTVMKFSQYCKNTTCKIKFIGIPKTIDNDLLGTDNCPGFGSAAKLI STLIMETYLDFSIYKNNGIFIVETMGRDTGWLAASSSLARLNDTPLVDLIYLPEIDFYEDKFIEDVRKIFKEKNKAYIVA SEGIRDKYGNFICEQKTSAHDKFGHSQLGGVSNYLKNLIVSSSITTRVKTLELGVIQRCAMHLASDTDLKQAAEVGAYGI ELSKKGYTGVMAIINRTCNNPYKYEVSHTDISKIANKTKYFPKEWINEECNYITDEALNYLYPLIQGKPDIKYKNGLPYF SIIY >Mature_404_residues MRNCIIAQSGGPTAVINASAVGIYEKNLETKYFDKVYFGINGIEGILNKNIIDSDSLNKDNVLNLKQTPSSGLGSCRYKL ADYKINSYDYDRVINILDEYEIDTLFYIGGNDSMDTVMKFSQYCKNTTCKIKFIGIPKTIDNDLLGTDNCPGFGSAAKLI STLIMETYLDFSIYKNNGIFIVETMGRDTGWLAASSSLARLNDTPLVDLIYLPEIDFYEDKFIEDVRKIFKEKNKAYIVA SEGIRDKYGNFICEQKTSAHDKFGHSQLGGVSNYLKNLIVSSSITTRVKTLELGVIQRCAMHLASDTDLKQAAEVGAYGI ELSKKGYTGVMAIINRTCNNPYKYEVSHTDISKIANKTKYFPKEWINEECNYITDEALNYLYPLIQGKPDIKYKNGLPYF SIIY
Specific function: Key control step of glycolysis. [C]
COG id: COG0205
COG function: function code G; 6-phosphofructokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphofructokinase family [H]
Homologues:
Organism=Escherichia coli, GI1790350, Length=367, Percent_Identity=25.6130790190736, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: 3981 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 950 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012003 - InterPro: IPR012829 - InterPro: IPR022953 - InterPro: IPR015912 - InterPro: IPR000023 [H]
Pfam domain/function: PF00365 PFK [H]
EC number: =2.7.1.90 [H]
Molecular weight: Translated: 45486; Mature: 45486
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNCIIAQSGGPTAVINASAVGIYEKNLETKYFDKVYFGINGIEGILNKNIIDSDSLNKD CCCEEEECCCCCEEEEECCEEEEECCCCCHHHHHHHEECCCHHHHHHCCCCCCCCCCCCC NVLNLKQTPSSGLGSCRYKLADYKINSYDYDRVINILDEYEIDTLFYIGGNDSMDTVMKF CEEEEECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHH SQYCKNTTCKIKFIGIPKTIDNDLLGTDNCPGFGSAAKLISTLIMETYLDFSIYKNNGIF HHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCEE IVETMGRDTGWLAASSSLARLNDTPLVDLIYLPEIDFYEDKFIEDVRKIFKEKNKAYIVA EEEECCCCCCCEEECCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEE SEGIRDKYGNFICEQKTSAHDKFGHSQLGGVSNYLKNLIVSSSITTRVKTLELGVIQRCA CCCCHHHHCCEEECCCCCHHHHCCCHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH MHLASDTDLKQAAEVGAYGIELSKKGYTGVMAIINRTCNNPYKYEVSHTDISKIANKTKY HHHCCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCC FPKEWINEECNYITDEALNYLYPLIQGKPDIKYKNGLPYFSIIY CCHHHHCCCCCEEHHHHHHHHHHHHCCCCCCEECCCCCEEEEEC >Mature Secondary Structure MRNCIIAQSGGPTAVINASAVGIYEKNLETKYFDKVYFGINGIEGILNKNIIDSDSLNKD CCCEEEECCCCCEEEEECCEEEEECCCCCHHHHHHHEECCCHHHHHHCCCCCCCCCCCCC NVLNLKQTPSSGLGSCRYKLADYKINSYDYDRVINILDEYEIDTLFYIGGNDSMDTVMKF CEEEEECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHH SQYCKNTTCKIKFIGIPKTIDNDLLGTDNCPGFGSAAKLISTLIMETYLDFSIYKNNGIF HHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCEE IVETMGRDTGWLAASSSLARLNDTPLVDLIYLPEIDFYEDKFIEDVRKIFKEKNKAYIVA EEEECCCCCCCEEECCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEE SEGIRDKYGNFICEQKTSAHDKFGHSQLGGVSNYLKNLIVSSSITTRVKTLELGVIQRCA CCCCHHHHCCEEECCCCCHHHHCCCHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH MHLASDTDLKQAAEVGAYGIELSKKGYTGVMAIINRTCNNPYKYEVSHTDISKIANKTKY HHHCCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCC FPKEWINEECNYITDEALNYLYPLIQGKPDIKYKNGLPYFSIIY CCHHHHCCCCCEEHHHHHHHHHHHHCCCCCCEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA