Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126700728

Identifier: 126700728

GI number: 126700728

Start: 3620470

End: 3621798

Strand: Direct

Name: 126700728

Synonym: CD3111

Alternate gene names: NA

Gene position: 3620470-3621798 (Clockwise)

Preceding gene: 126700727

Following gene: 126700739

Centisome position: 84.39

GC content: 25.58

Gene sequence:

>1329_bases
ATGATGAAAATAGCAGTCATAACAACCGAATTTTTAAAAGAGTTTGTAGATAATTCTATAAAAAAGTTAAATATTAATGC
AGAAATTGAAATATATATCTATAGAGATTTTTCTCATGTTGGAGATTTATATTTGGAAATAGAAGATAGGTTTGATGGAT
TTGCAGTTAGTGGCCCTATCCCCAAAAAAGCTATTACAAAAAAGGCTGGAACTATAAAAAAACCTCTAGTTGATTTTAGT
ACTGACTTACAAAGTTACTATGATATGTTTCTAAAGCTTATCTTTAAATATAATACATTAGATTTTTCTAGAGCATACTT
TGACTTAACAGACTGGGCAGATAATCCAAAAGATATATCATATTATTTATCAAATGGCACATTTGGAGACTTAATGGATA
GTATTGATGAAAATGCATCTAAAATGAGTTTATCTGACATAGCAAAACTTGAAAAAAAGATTGCAAAAAAACATATTAAT
CTATGGAATGAAGGGAAAATCGATTTTTCTACTACTCGTTTTAGTAGTATTGTTCCTATGTTACAAAATGCAGGAGTAAA
CTTTCATTTCATATACCCTGATATAGATTTATTAAAAAATACTTTTAATAACTTAATAAAAGATATTCATTTACATAGAA
TGAAGGGAAATCAACCAAGTGTAATATATATAACAGTTAAAGATACAAATTATGATGACTCTACTCTAGACCAAGTTTAT
AAAATATTAAATAGTATTAAAAAAGATAAATTAACCGATTTTATAATTGAAAAAAATAGTAATTCTTTTAAAATTTTCAC
TAAATGTGAAACGATTAAATCATTAACTAAAAATTTTACTGCATGTTATATAAAAGAATCTATTGAAAATAGTACAAATA
TTAAAGTATGTGTTGGATATGGAATTGGTAATGATATAAAGCAAGCTATGTCTAGTGCCATAAGTGCTAATAAGGAATCT
AAAATAAATCATTTAAATTACAGTTTCTTAGTTAACGAAAATTATGAGACAATAGGACCTTTACTGTGTGATAAGTTACT
TACTGTTTCAAATAAAGTAACTCCACATATAAATACAATTGCCAAAAGTTCTAAATTGTCTACTCTTACTATTCAAAAGA
TTATATCTGTTACTGAAATTCTACAAAGAGATGAAGTTACTCCTAAGGAATTATCTTCATGTTTAAATGTAACAGTTAGA
ACTGCTAATAGATTTCTAAGTAGTCTCTTAAAGTCTGGAAACGCTACTATATTATATGAAAAACAAAACTCAACAAAAGG
TAGACCTGAAAGGGTATACAAATTATTTATATCAGAAAATAAATATTAA

Upstream 100 bases:

>100_bases
ATTTTAATTGAATTTAATTGAAATACGATTTTAACTAGAACAATAGATTAATGTAATATTTAATATAAAATAATTATAAT
AATTGAAAAGGAAGTAATCT

Downstream 100 bases:

>100_bases
AATCCAAAATGCATAAAAATATTTTATCATCTAATATTAAGTAAAATTATATATGACTTTCTAAAAGGTATATCTTTGCA
TCTTTTTAAGATATACCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MMKIAVITTEFLKEFVDNSIKKLNINAEIEIYIYRDFSHVGDLYLEIEDRFDGFAVSGPIPKKAITKKAGTIKKPLVDFS
TDLQSYYDMFLKLIFKYNTLDFSRAYFDLTDWADNPKDISYYLSNGTFGDLMDSIDENASKMSLSDIAKLEKKIAKKHIN
LWNEGKIDFSTTRFSSIVPMLQNAGVNFHFIYPDIDLLKNTFNNLIKDIHLHRMKGNQPSVIYITVKDTNYDDSTLDQVY
KILNSIKKDKLTDFIIEKNSNSFKIFTKCETIKSLTKNFTACYIKESIENSTNIKVCVGYGIGNDIKQAMSSAISANKES
KINHLNYSFLVNENYETIGPLLCDKLLTVSNKVTPHINTIAKSSKLSTLTIQKIISVTEILQRDEVTPKELSSCLNVTVR
TANRFLSSLLKSGNATILYEKQNSTKGRPERVYKLFISENKY

Sequences:

>Translated_442_residues
MMKIAVITTEFLKEFVDNSIKKLNINAEIEIYIYRDFSHVGDLYLEIEDRFDGFAVSGPIPKKAITKKAGTIKKPLVDFS
TDLQSYYDMFLKLIFKYNTLDFSRAYFDLTDWADNPKDISYYLSNGTFGDLMDSIDENASKMSLSDIAKLEKKIAKKHIN
LWNEGKIDFSTTRFSSIVPMLQNAGVNFHFIYPDIDLLKNTFNNLIKDIHLHRMKGNQPSVIYITVKDTNYDDSTLDQVY
KILNSIKKDKLTDFIIEKNSNSFKIFTKCETIKSLTKNFTACYIKESIENSTNIKVCVGYGIGNDIKQAMSSAISANKES
KINHLNYSFLVNENYETIGPLLCDKLLTVSNKVTPHINTIAKSSKLSTLTIQKIISVTEILQRDEVTPKELSSCLNVTVR
TANRFLSSLLKSGNATILYEKQNSTKGRPERVYKLFISENKY
>Mature_442_residues
MMKIAVITTEFLKEFVDNSIKKLNINAEIEIYIYRDFSHVGDLYLEIEDRFDGFAVSGPIPKKAITKKAGTIKKPLVDFS
TDLQSYYDMFLKLIFKYNTLDFSRAYFDLTDWADNPKDISYYLSNGTFGDLMDSIDENASKMSLSDIAKLEKKIAKKHIN
LWNEGKIDFSTTRFSSIVPMLQNAGVNFHFIYPDIDLLKNTFNNLIKDIHLHRMKGNQPSVIYITVKDTNYDDSTLDQVY
KILNSIKKDKLTDFIIEKNSNSFKIFTKCETIKSLTKNFTACYIKESIENSTNIKVCVGYGIGNDIKQAMSSAISANKES
KINHLNYSFLVNENYETIGPLLCDKLLTVSNKVTPHINTIAKSSKLSTLTIQKIISVTEILQRDEVTPKELSSCLNVTVR
TANRFLSSLLKSGNATILYEKQNSTKGRPERVYKLFISENKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50468; Mature: 50468

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKIAVITTEFLKEFVDNSIKKLNINAEIEIYIYRDFSHVGDLYLEIEDRFDGFAVSGPI
CEEEEEEHHHHHHHHHCCCCEEEECCEEEEEEEEECCCCCCCEEEEEECCCCCEEECCCC
PKKAITKKAGTIKKPLVDFSTDLQSYYDMFLKLIFKYNTLDFSRAYFDLTDWADNPKDIS
CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCCCCCCCCEE
YYLSNGTFGDLMDSIDENASKMSLSDIAKLEKKIAKKHINLWNEGKIDFSTTRFSSIVPM
EEECCCCHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHH
LQNAGVNFHFIYPDIDLLKNTFNNLIKDIHLHRMKGNQPSVIYITVKDTNYDDSTLDQVY
HHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHH
KILNSIKKDKLTDFIIEKNSNSFKIFTKCETIKSLTKNFTACYIKESIENSTNIKVCVGY
HHHHHHHHHHHHHEEEECCCCCEEEEEHHHHHHHHHCCHHEEEEEHHCCCCCCEEEEEEC
GIGNDIKQAMSSAISANKESKINHLNYSFLVNENYETIGPLLCDKLLTVSNKVTPHINTI
CCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHH
AKSSKLSTLTIQKIISVTEILQRDEVTPKELSSCLNVTVRTANRFLSSLLKSGNATILYE
HCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
KQNSTKGRPERVYKLFISENKY
CCCCCCCCHHHHEEEEECCCCC
>Mature Secondary Structure
MMKIAVITTEFLKEFVDNSIKKLNINAEIEIYIYRDFSHVGDLYLEIEDRFDGFAVSGPI
CEEEEEEHHHHHHHHHCCCCEEEECCEEEEEEEEECCCCCCCEEEEEECCCCCEEECCCC
PKKAITKKAGTIKKPLVDFSTDLQSYYDMFLKLIFKYNTLDFSRAYFDLTDWADNPKDIS
CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCCCCCCCCEE
YYLSNGTFGDLMDSIDENASKMSLSDIAKLEKKIAKKHINLWNEGKIDFSTTRFSSIVPM
EEECCCCHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHH
LQNAGVNFHFIYPDIDLLKNTFNNLIKDIHLHRMKGNQPSVIYITVKDTNYDDSTLDQVY
HHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHH
KILNSIKKDKLTDFIIEKNSNSFKIFTKCETIKSLTKNFTACYIKESIENSTNIKVCVGY
HHHHHHHHHHHHHEEEECCCCCEEEEEHHHHHHHHHCCHHEEEEEHHCCCCCCEEEEEEC
GIGNDIKQAMSSAISANKESKINHLNYSFLVNENYETIGPLLCDKLLTVSNKVTPHINTI
CCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHH
AKSSKLSTLTIQKIISVTEILQRDEVTPKELSSCLNVTVRTANRFLSSLLKSGNATILYE
HCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
KQNSTKGRPERVYKLFISENKY
CCCCCCCCHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA