| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is tal [H]
Identifier: 126700723
GI number: 126700723
Start: 3614324
End: 3614965
Strand: Direct
Name: tal [H]
Synonym: CD3106
Alternate gene names: 126700723
Gene position: 3614324-3614965 (Clockwise)
Preceding gene: 126700708
Following gene: 126700724
Centisome position: 84.25
GC content: 27.73
Gene sequence:
>642_bases ATGAAATATTTGATAGACAGTGCTAATCTTGATGAAATTCAAAAGTGTTTAAAGTATGGATTTAAGGGAATAACCGCTAA TCCATCTATGTATCTTAAAGAGAAAGTAAACTTCCATGAATTTATTGAGACATGTGCTAATTTAAATCCAGAAATATTAA CTGCTGAAGTCATTGGAAATAATTTATACGAATTAATTAATTCATGTGATAAGATATTAAATATAAATAAAAACACTATA ATAAAAATAAATTTCTCTGAAGTTGGCTTAGAACTTATAAACATATTAAATAGTAAAGGTGTAAAAACTGCATGTACCTT GATTTTCAATGTAAATCAAGCATCATTAGCTATAAATGCAGGTGCTGATTACCTATTCCCTTTTATAGGTAGAAATGATG AAAATGGGAATGATGGTATAAAAAACCTTACAGAAATATGTAACCTTATATCAATAAATGGATATAATACTAAAGTTGTT GCAGCTTCTATTAAAAATGTATTCCACTTAACTCAAGCATCTCTTTGTGGATGTGATTATGCAGCTGTAACATATGATTT ATTTAAAAAAGCTTCTTTTAACCAGCTCACAATAGATGGTGCCAATACTTTTGAAAGAGATTGGTCCAAGGTTAATAAAT AG
Upstream 100 bases:
>100_bases GTTATAATTTTATAATCAATCTTATTGTATAATTGACTTAATAATAAAAATAGAGTATATACACTTTTTTATGACAAATA GCTTAAAGGAGAATTAAATT
Downstream 100 bases:
>100_bases TAACTAAGATTTAGGAGGGTTTGCATTGAACAAAAGATTATTAGATATTGCTGAATTATTACTCAACAGCTCAGACTATA TTACTGTAGATACTATTGCT
Product: phopho-sugar aldolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKYLIDSANLDEIQKCLKYGFKGITANPSMYLKEKVNFHEFIETCANLNPEILTAEVIGNNLYELINSCDKILNINKNTI IKINFSEVGLELINILNSKGVKTACTLIFNVNQASLAINAGADYLFPFIGRNDENGNDGIKNLTEICNLISINGYNTKVV AASIKNVFHLTQASLCGCDYAAVTYDLFKKASFNQLTIDGANTFERDWSKVNK
Sequences:
>Translated_213_residues MKYLIDSANLDEIQKCLKYGFKGITANPSMYLKEKVNFHEFIETCANLNPEILTAEVIGNNLYELINSCDKILNINKNTI IKINFSEVGLELINILNSKGVKTACTLIFNVNQASLAINAGADYLFPFIGRNDENGNDGIKNLTEICNLISINGYNTKVV AASIKNVFHLTQASLCGCDYAAVTYDLFKKASFNQLTIDGANTFERDWSKVNK >Mature_213_residues MKYLIDSANLDEIQKCLKYGFKGITANPSMYLKEKVNFHEFIETCANLNPEILTAEVIGNNLYELINSCDKILNINKNTI IKINFSEVGLELINILNSKGVKTACTLIFNVNQASLAINAGADYLFPFIGRNDENGNDGIKNLTEICNLISINGYNTKVV AASIKNVFHLTQASLCGCDYAAVTYDLFKKASFNQLTIDGANTFERDWSKVNK
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 3B subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081788, Length=217, Percent_Identity=24.8847926267281, Blast_Score=90, Evalue=9e-20, Organism=Escherichia coli, GI1790382, Length=212, Percent_Identity=26.4150943396226, Blast_Score=88, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004731 - InterPro: IPR022999 - InterPro: IPR018225 [H]
Pfam domain/function: PF00923 Transaldolase [H]
EC number: =2.2.1.2 [H]
Molecular weight: Translated: 23669; Mature: 23669
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLIDSANLDEIQKCLKYGFKGITANPSMYLKEKVNFHEFIETCANLNPEILTAEVIGN CCEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCEEEHHHHCC NLYELINSCDKILNINKNTIIKINFSEVGLELINILNSKGVKTACTLIFNVNQASLAINA HHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEC GADYLFPFIGRNDENGNDGIKNLTEICNLISINGYNTKVVAASIKNVFHLTQASLCGCDY CCCCEEHHCCCCCCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCH AAVTYDLFKKASFNQLTIDGANTFERDWSKVNK HHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCC >Mature Secondary Structure MKYLIDSANLDEIQKCLKYGFKGITANPSMYLKEKVNFHEFIETCANLNPEILTAEVIGN CCEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCEEEHHHHCC NLYELINSCDKILNINKNTIIKINFSEVGLELINILNSKGVKTACTLIFNVNQASLAINA HHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEC GADYLFPFIGRNDENGNDGIKNLTEICNLISINGYNTKVVAASIKNVFHLTQASLCGCDY CCCCEEHHCCCCCCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCH AAVTYDLFKKASFNQLTIDGANTFERDWSKVNK HHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA