| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is uxaA [H]
Identifier: 126700488
GI number: 126700488
Start: 3358914
End: 3360077
Strand: Direct
Name: uxaA [H]
Synonym: CD2872
Alternate gene names: 126700488
Gene position: 3358914-3360077 (Clockwise)
Preceding gene: 126700487
Following gene: 126700489
Centisome position: 78.29
GC content: 35.4
Gene sequence:
>1164_bases ATGAAATTAATGGGTTATTTAAGAGAAAATGGTCAGTTTGGTATTCGTAATCATGTTTTAATTATTCCAACATCTGTATG TTCAAGTGAGACAGCTACAAGAATAGCATCACTTGTGCCTGGAGCAATAGCAATCCCTCATCAACATGGATGTTGTCAAA TTGGTTCTGATATAGAGCTTACAGCAAAGACATTAATAGGATTTGGAAAAAATCCTAATGTTGCCGCAGTTTTAGTAGTT GGTCTTGGATGTGATGGTATTCAAGCAAAAGAATTAGCATCTGAAATAGCTACAACAGGAAAAAAGGTAGATTACGTTGT TATACAAGAATGTGGCGGAACATTAAAAACAGTTTCTAAGGGAGCTGAAATAGTAAGTAAAATGGCTCGTGAAGTATCAA AAGAAGTAAGAGTTGAATTTGGTATGAGTGAAATTACATTAGCACTTGAATGTGGTGGTTCTGACCCAACAAGTGGAATA GCTTCAAACCCTTCAATAGGCGTTGCATCAAACCTTCTTGTAGATGAAGGTGGAAGTAGCATACTAAGTGAAACTACAGA AGTAATTGGTGCAGAACATTTGTTGGCTACCCGTTTTGAAGATGAAGAAATGAAAGATAAGTTTCTTAAATTTGTAAGTG ATGTAGAAAAAAGAGCAATTGCTATGGGAGAAGATTTACGTAGTGGTCAACCTACTCCAGGCAATAAAACTGGTGGACTT TCAACAATTGAAGAAAAGTCACTTGGGTGTATGTATAAGGCAGGCAATAAGCCATTCAAAGGTGCTCTTGAATATGCTGA TATTGTACCTCCTGATAAAAAAGGATTATATTTTATGGATACTCCAGGTCAAGATATAGATTCTATCACTGGTATGGTAG CAGGTGGTGCACAAATTGTAATCTTTTCAACTGGTAGAGGTACTCCAACAGGAAGCCCTATTTCACCAGTTATTAAAATC ACTGGGAATAGTGATACATACAACAAAATGCCAGACAATATCGATATAAATGCAGGTAGAATTATAACAGATGGTGCTAA AATAGCAGATATAGGTCAAGAAATATTTAATGAAATAATAGAAGTCTGTAATGGTAAACATACCAAAGCTGAAAGTCTTG GTCATAGAGAATTTGGCATTTACAGAATTTCATCTACATTTTAG
Upstream 100 bases:
>100_bases AGGAATTGCAACAGTTGACATAAAAACTGGTGACTATGTTCATGTACATAACATTGAAAGTACACGTGGTCGTGGAGATA AAAAATAGGAGGAAGTTAAA
Downstream 100 bases:
>100_bases ATTGTAACAAAATATCTTTTATAAATATAATACTTATGTAGATACATAAGCTAAAAGTTCTTTCTAATACTATAAAAATT TTCTATACTGAAAAGGAACT
Product: altronate hydrolase
Products: NA
Alternate protein names: Altronic acid hydratase [H]
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MKLMGYLRENGQFGIRNHVLIIPTSVCSSETATRIASLVPGAIAIPHQHGCCQIGSDIELTAKTLIGFGKNPNVAAVLVV GLGCDGIQAKELASEIATTGKKVDYVVIQECGGTLKTVSKGAEIVSKMAREVSKEVRVEFGMSEITLALECGGSDPTSGI ASNPSIGVASNLLVDEGGSSILSETTEVIGAEHLLATRFEDEEMKDKFLKFVSDVEKRAIAMGEDLRSGQPTPGNKTGGL STIEEKSLGCMYKAGNKPFKGALEYADIVPPDKKGLYFMDTPGQDIDSITGMVAGGAQIVIFSTGRGTPTGSPISPVIKI TGNSDTYNKMPDNIDINAGRIITDGAKIADIGQEIFNEIIEVCNGKHTKAESLGHREFGIYRISSTF
Sequences:
>Translated_387_residues MKLMGYLRENGQFGIRNHVLIIPTSVCSSETATRIASLVPGAIAIPHQHGCCQIGSDIELTAKTLIGFGKNPNVAAVLVV GLGCDGIQAKELASEIATTGKKVDYVVIQECGGTLKTVSKGAEIVSKMAREVSKEVRVEFGMSEITLALECGGSDPTSGI ASNPSIGVASNLLVDEGGSSILSETTEVIGAEHLLATRFEDEEMKDKFLKFVSDVEKRAIAMGEDLRSGQPTPGNKTGGL STIEEKSLGCMYKAGNKPFKGALEYADIVPPDKKGLYFMDTPGQDIDSITGMVAGGAQIVIFSTGRGTPTGSPISPVIKI TGNSDTYNKMPDNIDINAGRIITDGAKIADIGQEIFNEIIEVCNGKHTKAESLGHREFGIYRISSTF >Mature_387_residues MKLMGYLRENGQFGIRNHVLIIPTSVCSSETATRIASLVPGAIAIPHQHGCCQIGSDIELTAKTLIGFGKNPNVAAVLVV GLGCDGIQAKELASEIATTGKKVDYVVIQECGGTLKTVSKGAEIVSKMAREVSKEVRVEFGMSEITLALECGGSDPTSGI ASNPSIGVASNLLVDEGGSSILSETTEVIGAEHLLATRFEDEEMKDKFLKFVSDVEKRAIAMGEDLRSGQPTPGNKTGGL STIEEKSLGCMYKAGNKPFKGALEYADIVPPDKKGLYFMDTPGQDIDSITGMVAGGAQIVIFSTGRGTPTGSPISPVIKI TGNSDTYNKMPDNIDINAGRIITDGAKIADIGQEIFNEIIEVCNGKHTKAESLGHREFGIYRISSTF
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG2721
COG function: function code G; Altronate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uxaA family [H]
Homologues:
Organism=Escherichia coli, GI1789475, Length=388, Percent_Identity=33.5051546391753, Blast_Score=216, Evalue=3e-57, Organism=Escherichia coli, GI1789516, Length=403, Percent_Identity=31.7617866004963, Blast_Score=176, Evalue=2e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007392 - InterPro: IPR013974 [H]
Pfam domain/function: PF04295 GD_AH_C; PF08666 SAF [H]
EC number: =4.2.1.7 [H]
Molecular weight: Translated: 40893; Mature: 40893
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLMGYLRENGQFGIRNHVLIIPTSVCSSETATRIASLVPGAIAIPHQHGCCQIGSDIEL CCCCHHHHCCCCCCCCCCEEEEECHHCCCHHHHHHHHHCCCCEECCCCCCCEECCCCCEE TAKTLIGFGKNPNVAAVLVVGLGCDGIQAKELASEIATTGKKVDYVVIQECGGTLKTVSK EHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHH GAEIVSKMAREVSKEVRVEFGMSEITLALECGGSDPTSGIASNPSIGVASNLLVDEGGSS HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCH ILSETTEVIGAEHLLATRFEDEEMKDKFLKFVSDVEKRAIAMGEDLRSGQPTPGNKTGGL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCC STIEEKSLGCMYKAGNKPFKGALEYADIVPPDKKGLYFMDTPGQDIDSITGMVAGGAQIV CHHHHHCCCEEEECCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHCCCCEEEE IFSTGRGTPTGSPISPVIKITGNSDTYNKMPDNIDINAGRIITDGAKIADIGQEIFNEII EEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCEEEECCCHHHHHHHHHHHHHH EVCNGKHTKAESLGHREFGIYRISSTF HHHCCCCCCHHHCCCCCEEEEEEECCC >Mature Secondary Structure MKLMGYLRENGQFGIRNHVLIIPTSVCSSETATRIASLVPGAIAIPHQHGCCQIGSDIEL CCCCHHHHCCCCCCCCCCEEEEECHHCCCHHHHHHHHHCCCCEECCCCCCCEECCCCCEE TAKTLIGFGKNPNVAAVLVVGLGCDGIQAKELASEIATTGKKVDYVVIQECGGTLKTVSK EHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHH GAEIVSKMAREVSKEVRVEFGMSEITLALECGGSDPTSGIASNPSIGVASNLLVDEGGSS HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCH ILSETTEVIGAEHLLATRFEDEEMKDKFLKFVSDVEKRAIAMGEDLRSGQPTPGNKTGGL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCC STIEEKSLGCMYKAGNKPFKGALEYADIVPPDKKGLYFMDTPGQDIDSITGMVAGGAQIV CHHHHHCCCEEEECCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHCCCCEEEE IFSTGRGTPTGSPISPVIKITGNSDTYNKMPDNIDINAGRIITDGAKIADIGQEIFNEII EEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCEEEECCCHHHHHHHHHHHHHH EVCNGKHTKAESLGHREFGIYRISSTF HHHCCCCCCHHHCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579062; 9384377 [H]