| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126700426
Identifier: 126700426
GI number: 126700426
Start: 3279575
End: 3280435
Strand: Direct
Name: 126700426
Synonym: CD2810
Alternate gene names: NA
Gene position: 3279575-3280435 (Clockwise)
Preceding gene: 126700425
Following gene: 126700430
Centisome position: 76.44
GC content: 24.97
Gene sequence:
>861_bases GTGCTTATGAGTACATTTTATATTCAATTTCTTTATTTTGTAATTTATAGCTTTATAGGATGGTGTTGTGAAACTACATA TTGTTCAGTTTTACAAAAACAATTTGTAAATAGAGGTTTTTTAAATGGTCCATTTTGCCCTATATATGGATTTGGAGCAT TAGCAATAGTTGCTACATTGACTCCTTTTGTACACAATATTCCTTTGTTATTTTTGTTTAGTATAATTATAACTAGCATA ATGGAGTATTGTACGAGCTTTATTTTAGAAAAAATATTTAATATGACTTGGTGGGATTATTCTAAACATAAATTTAATAT TCATGGAAGAGTTTGTCTGGAAAATTCACTTATGTTTGGTGTATTATCATTGATTGTAATGCTTATAGTACATCCTATTG TGGTTGATTTTATTAACTCTATCTCTAAAAATGTGCTATTTATATTTGCTATATCTATAGAAATTTATTTTGTTTTAGAT TTAGTTATCACAGTCCATACAATTTTACAATTAAATGGTAAGTTAAAACAAATCAATCTTATAATTAAGGAATTAAAAGA TAAGAAAGAATACTACAAACTTATTACACAAGAAACTATAGAAAACAAACTTGAATCTTTAGTTGAAAATAGACTGGATA CTTTGGAAGATAGATTTGAAATACTTAAGGAAAAAGAAAACTATCGCTATGCTAAAAATCGTATTGATGAGCTAAAAAAT AAACTTAATACTTTGCTGTCTAACCACAAATTACTTCATAGACGTATAATCAAAGCATTCCCCAACATAAGCTCTAATAA GCATACAGATATTTTAAATAAAATCAAAGAAAATATTAAATCAATTAAAAAAGATAAATAA
Upstream 100 bases:
>100_bases ATTTCTATAAATTGGTATAATCAATATGTAAATTGAATTTAGTAAATTAATCATAAAAATAAAATATCGAGTATATAGTG TTATACTAACTAGAAATGAG
Downstream 100 bases:
>100_bases TAAAATAAACACATAAGTTAAATAATAAAAATACTAATACATAAGATTAAGGTTTAGAATATTTTTTGTAAAATACTCTA AACCCTAATTAATATACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MLMSTFYIQFLYFVIYSFIGWCCETTYCSVLQKQFVNRGFLNGPFCPIYGFGALAIVATLTPFVHNIPLLFLFSIIITSI MEYCTSFILEKIFNMTWWDYSKHKFNIHGRVCLENSLMFGVLSLIVMLIVHPIVVDFINSISKNVLFIFAISIEIYFVLD LVITVHTILQLNGKLKQINLIIKELKDKKEYYKLITQETIENKLESLVENRLDTLEDRFEILKEKENYRYAKNRIDELKN KLNTLLSNHKLLHRRIIKAFPNISSNKHTDILNKIKENIKSIKKDK
Sequences:
>Translated_286_residues MLMSTFYIQFLYFVIYSFIGWCCETTYCSVLQKQFVNRGFLNGPFCPIYGFGALAIVATLTPFVHNIPLLFLFSIIITSI MEYCTSFILEKIFNMTWWDYSKHKFNIHGRVCLENSLMFGVLSLIVMLIVHPIVVDFINSISKNVLFIFAISIEIYFVLD LVITVHTILQLNGKLKQINLIIKELKDKKEYYKLITQETIENKLESLVENRLDTLEDRFEILKEKENYRYAKNRIDELKN KLNTLLSNHKLLHRRIIKAFPNISSNKHTDILNKIKENIKSIKKDK >Mature_286_residues MLMSTFYIQFLYFVIYSFIGWCCETTYCSVLQKQFVNRGFLNGPFCPIYGFGALAIVATLTPFVHNIPLLFLFSIIITSI MEYCTSFILEKIFNMTWWDYSKHKFNIHGRVCLENSLMFGVLSLIVMLIVHPIVVDFINSISKNVLFIFAISIEIYFVLD LVITVHTILQLNGKLKQINLIIKELKDKKEYYKLITQETIENKLESLVENRLDTLEDRFEILKEKENYRYAKNRIDELKN KLNTLLSNHKLLHRRIIKAFPNISSNKHTDILNKIKENIKSIKKDK
Specific function: Unknown
COG id: COG4905
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33657; Mature: 33657
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMSTFYIQFLYFVIYSFIGWCCETTYCSVLQKQFVNRGFLNGPFCPIYGFGALAIVATL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH TPFVHNIPLLFLFSIIITSIMEYCTSFILEKIFNMTWWDYSKHKFNIHGRVCLENSLMFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHH VLSLIVMLIVHPIVVDFINSISKNVLFIFAISIEIYFVLDLVITVHTILQLNGKLKQINL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IIKELKDKKEYYKLITQETIENKLESLVENRLDTLEDRFEILKEKENYRYAKNRIDELKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLNTLLSNHKLLHRRIIKAFPNISSNKHTDILNKIKENIKSIKKDK HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLMSTFYIQFLYFVIYSFIGWCCETTYCSVLQKQFVNRGFLNGPFCPIYGFGALAIVATL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH TPFVHNIPLLFLFSIIITSIMEYCTSFILEKIFNMTWWDYSKHKFNIHGRVCLENSLMFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHH VLSLIVMLIVHPIVVDFINSISKNVLFIFAISIEIYFVLDLVITVHTILQLNGKLKQINL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IIKELKDKKEYYKLITQETIENKLESLVENRLDTLEDRFEILKEKENYRYAKNRIDELKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLNTLLSNHKLLHRRIIKAFPNISSNKHTDILNKIKENIKSIKKDK HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA