Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is 126700426

Identifier: 126700426

GI number: 126700426

Start: 3279575

End: 3280435

Strand: Direct

Name: 126700426

Synonym: CD2810

Alternate gene names: NA

Gene position: 3279575-3280435 (Clockwise)

Preceding gene: 126700425

Following gene: 126700430

Centisome position: 76.44

GC content: 24.97

Gene sequence:

>861_bases
GTGCTTATGAGTACATTTTATATTCAATTTCTTTATTTTGTAATTTATAGCTTTATAGGATGGTGTTGTGAAACTACATA
TTGTTCAGTTTTACAAAAACAATTTGTAAATAGAGGTTTTTTAAATGGTCCATTTTGCCCTATATATGGATTTGGAGCAT
TAGCAATAGTTGCTACATTGACTCCTTTTGTACACAATATTCCTTTGTTATTTTTGTTTAGTATAATTATAACTAGCATA
ATGGAGTATTGTACGAGCTTTATTTTAGAAAAAATATTTAATATGACTTGGTGGGATTATTCTAAACATAAATTTAATAT
TCATGGAAGAGTTTGTCTGGAAAATTCACTTATGTTTGGTGTATTATCATTGATTGTAATGCTTATAGTACATCCTATTG
TGGTTGATTTTATTAACTCTATCTCTAAAAATGTGCTATTTATATTTGCTATATCTATAGAAATTTATTTTGTTTTAGAT
TTAGTTATCACAGTCCATACAATTTTACAATTAAATGGTAAGTTAAAACAAATCAATCTTATAATTAAGGAATTAAAAGA
TAAGAAAGAATACTACAAACTTATTACACAAGAAACTATAGAAAACAAACTTGAATCTTTAGTTGAAAATAGACTGGATA
CTTTGGAAGATAGATTTGAAATACTTAAGGAAAAAGAAAACTATCGCTATGCTAAAAATCGTATTGATGAGCTAAAAAAT
AAACTTAATACTTTGCTGTCTAACCACAAATTACTTCATAGACGTATAATCAAAGCATTCCCCAACATAAGCTCTAATAA
GCATACAGATATTTTAAATAAAATCAAAGAAAATATTAAATCAATTAAAAAAGATAAATAA

Upstream 100 bases:

>100_bases
ATTTCTATAAATTGGTATAATCAATATGTAAATTGAATTTAGTAAATTAATCATAAAAATAAAATATCGAGTATATAGTG
TTATACTAACTAGAAATGAG

Downstream 100 bases:

>100_bases
TAAAATAAACACATAAGTTAAATAATAAAAATACTAATACATAAGATTAAGGTTTAGAATATTTTTTGTAAAATACTCTA
AACCCTAATTAATATACTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MLMSTFYIQFLYFVIYSFIGWCCETTYCSVLQKQFVNRGFLNGPFCPIYGFGALAIVATLTPFVHNIPLLFLFSIIITSI
MEYCTSFILEKIFNMTWWDYSKHKFNIHGRVCLENSLMFGVLSLIVMLIVHPIVVDFINSISKNVLFIFAISIEIYFVLD
LVITVHTILQLNGKLKQINLIIKELKDKKEYYKLITQETIENKLESLVENRLDTLEDRFEILKEKENYRYAKNRIDELKN
KLNTLLSNHKLLHRRIIKAFPNISSNKHTDILNKIKENIKSIKKDK

Sequences:

>Translated_286_residues
MLMSTFYIQFLYFVIYSFIGWCCETTYCSVLQKQFVNRGFLNGPFCPIYGFGALAIVATLTPFVHNIPLLFLFSIIITSI
MEYCTSFILEKIFNMTWWDYSKHKFNIHGRVCLENSLMFGVLSLIVMLIVHPIVVDFINSISKNVLFIFAISIEIYFVLD
LVITVHTILQLNGKLKQINLIIKELKDKKEYYKLITQETIENKLESLVENRLDTLEDRFEILKEKENYRYAKNRIDELKN
KLNTLLSNHKLLHRRIIKAFPNISSNKHTDILNKIKENIKSIKKDK
>Mature_286_residues
MLMSTFYIQFLYFVIYSFIGWCCETTYCSVLQKQFVNRGFLNGPFCPIYGFGALAIVATLTPFVHNIPLLFLFSIIITSI
MEYCTSFILEKIFNMTWWDYSKHKFNIHGRVCLENSLMFGVLSLIVMLIVHPIVVDFINSISKNVLFIFAISIEIYFVLD
LVITVHTILQLNGKLKQINLIIKELKDKKEYYKLITQETIENKLESLVENRLDTLEDRFEILKEKENYRYAKNRIDELKN
KLNTLLSNHKLLHRRIIKAFPNISSNKHTDILNKIKENIKSIKKDK

Specific function: Unknown

COG id: COG4905

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33657; Mature: 33657

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA