Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126700425

Identifier: 126700425

GI number: 126700425

Start: 3278990

End: 3279313

Strand: Direct

Name: 126700425

Synonym: CD2809

Alternate gene names: NA

Gene position: 3278990-3279313 (Clockwise)

Preceding gene: 126700404

Following gene: 126700426

Centisome position: 76.43

GC content: 27.16

Gene sequence:

>324_bases
TTGGAAAGAATAAACTGTAATGTAATTAACTGTTCACATAACAACAGCCATATATGTTATGCAGATAAAATTTTTATAAA
TGGTGAAAAAGCTCACAATGACAGACATACTTGTTGTAGTTCATTTTTAGATGAATCTATTTATAGTAATTTATCTAGCA
ACGTTAATAATAGAAATTGTGAGGAATTAGTTTGTACTGTAAAAAATTGTAAATACAACAAAGATGGTAGCTTATGTACA
CTTGATAATATATTGGTTGCTCCTGAAACTGATAGAGTAAATCTTTATATTGAAACATGTTGCTCTAGTTTCGAATGTAA
ATAG

Upstream 100 bases:

>100_bases
GAATAGATATTTTCTAAAAGGTAGTTTTCTCTTAATGGTTATATTCTTGTAATTATATGGACATAATTTATAATAAATAA
TCGTTTAGGAGGTAATAACT

Downstream 100 bases:

>100_bases
TCATAGTATAAATATAAGGGTGTCAAATGTAATTAAACTAACATAGTGTAGAGTATCTATAACTATTAGTTTGATTATAC
TTGACACCCTTATTTATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MERINCNVINCSHNNSHICYADKIFINGEKAHNDRHTCCSSFLDESIYSNLSSNVNNRNCEELVCTVKNCKYNKDGSLCT
LDNILVAPETDRVNLYIETCCSSFECK

Sequences:

>Translated_107_residues
MERINCNVINCSHNNSHICYADKIFINGEKAHNDRHTCCSSFLDESIYSNLSSNVNNRNCEELVCTVKNCKYNKDGSLCT
LDNILVAPETDRVNLYIETCCSSFECK
>Mature_107_residues
MERINCNVINCSHNNSHICYADKIFINGEKAHNDRHTCCSSFLDESIYSNLSSNVNNRNCEELVCTVKNCKYNKDGSLCT
LDNILVAPETDRVNLYIETCCSSFECK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12153; Mature: 12153

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
12.1 %Cys+Met (Translated Protein)
11.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
12.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERINCNVINCSHNNSHICYADKIFINGEKAHNDRHTCCSSFLDESIYSNLSSNVNNRNC
CCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH
EELVCTVKNCKYNKDGSLCTLDNILVAPETDRVNLYIETCCSSFECK
HHHHHHHCCCCCCCCCCEEEECCEEECCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MERINCNVINCSHNNSHICYADKIFINGEKAHNDRHTCCSSFLDESIYSNLSSNVNNRNC
CCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH
EELVCTVKNCKYNKDGSLCTLDNILVAPETDRVNLYIETCCSSFECK
HHHHHHHCCCCCCCCCCEEEECCEEECCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA