| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126700425
Identifier: 126700425
GI number: 126700425
Start: 3278990
End: 3279313
Strand: Direct
Name: 126700425
Synonym: CD2809
Alternate gene names: NA
Gene position: 3278990-3279313 (Clockwise)
Preceding gene: 126700404
Following gene: 126700426
Centisome position: 76.43
GC content: 27.16
Gene sequence:
>324_bases TTGGAAAGAATAAACTGTAATGTAATTAACTGTTCACATAACAACAGCCATATATGTTATGCAGATAAAATTTTTATAAA TGGTGAAAAAGCTCACAATGACAGACATACTTGTTGTAGTTCATTTTTAGATGAATCTATTTATAGTAATTTATCTAGCA ACGTTAATAATAGAAATTGTGAGGAATTAGTTTGTACTGTAAAAAATTGTAAATACAACAAAGATGGTAGCTTATGTACA CTTGATAATATATTGGTTGCTCCTGAAACTGATAGAGTAAATCTTTATATTGAAACATGTTGCTCTAGTTTCGAATGTAA ATAG
Upstream 100 bases:
>100_bases GAATAGATATTTTCTAAAAGGTAGTTTTCTCTTAATGGTTATATTCTTGTAATTATATGGACATAATTTATAATAAATAA TCGTTTAGGAGGTAATAACT
Downstream 100 bases:
>100_bases TCATAGTATAAATATAAGGGTGTCAAATGTAATTAAACTAACATAGTGTAGAGTATCTATAACTATTAGTTTGATTATAC TTGACACCCTTATTTATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MERINCNVINCSHNNSHICYADKIFINGEKAHNDRHTCCSSFLDESIYSNLSSNVNNRNCEELVCTVKNCKYNKDGSLCT LDNILVAPETDRVNLYIETCCSSFECK
Sequences:
>Translated_107_residues MERINCNVINCSHNNSHICYADKIFINGEKAHNDRHTCCSSFLDESIYSNLSSNVNNRNCEELVCTVKNCKYNKDGSLCT LDNILVAPETDRVNLYIETCCSSFECK >Mature_107_residues MERINCNVINCSHNNSHICYADKIFINGEKAHNDRHTCCSSFLDESIYSNLSSNVNNRNCEELVCTVKNCKYNKDGSLCT LDNILVAPETDRVNLYIETCCSSFECK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12153; Mature: 12153
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
11.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 12.1 %Cys+Met (Translated Protein) 11.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 12.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERINCNVINCSHNNSHICYADKIFINGEKAHNDRHTCCSSFLDESIYSNLSSNVNNRNC CCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH EELVCTVKNCKYNKDGSLCTLDNILVAPETDRVNLYIETCCSSFECK HHHHHHHCCCCCCCCCCEEEECCEEECCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure MERINCNVINCSHNNSHICYADKIFINGEKAHNDRHTCCSSFLDESIYSNLSSNVNNRNC CCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH EELVCTVKNCKYNKDGSLCTLDNILVAPETDRVNLYIETCCSSFECK HHHHHHHCCCCCCCCCCEEEECCEEECCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA